Trimin1|351767|estExt_Genemark1.C_Ctg_990064 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351767
Unique NameTrimin1|351767|estExt_Genemark1.C_Ctg_990064
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length112
Homology
BLAST of jgi.p|Trimin1|351767 vs. uniprot
Match: A0A835YGV9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGV9_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.570e-64
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query:    1 MYKALAVVALVGSVAAFAPVAPAVARVSSSALKAGYVPDGLSEAEWEAQKAAKAEAAAARKAKFAAQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQDREQAKPRASSFLK 111
            MYKALAVVALVGSVAAFAPVAPAVARVSSSALKAGYVPDGLSEAEWEAQKAAKAEAAAARKAKFAAQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQDREQAKPRASSFLK
Sbjct:    1 MYKALAVVALVGSVAAFAPVAPAVARVSSSALKAGYVPDGLSEAEWEAQKAAKAEAAAARKAKFAAQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQDREQAKPRASSFLK 111          
BLAST of jgi.p|Trimin1|351767 vs. uniprot
Match: A0A7S2V559_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V559_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.470e-19
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 MYKALAVVALVGSVAAFAPVAPAVARVSSSALKAGYVPDGLSEAEWEAQKAAKAEAAAARKAKFA-AQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQDREQAKPRASSFL 110
            M K LA++    ++AA +    A+    +     GYVPDG++EAE+EA K   AE   A K KFA  + FE L EWM  RDAK+PGQ+GAGHRMAKV+D+E+ +P A+  L
Sbjct:    1 MNKLLALIVAALALAAVSAFQAAMPATRAMTRLNGYVPDGITEAEYEAMKKKDAEKKVANKGKFAKGKKFETLDEWMIARDAKYPGQLGAGHRMAKVKDQEKPRPGAARGL 111          
BLAST of jgi.p|Trimin1|351767 vs. uniprot
Match: A0A7S2SUA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUA3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 6.660e-18
Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    3 KALAVVALVGSVAAFAPVAP--AVARVSSSALKAGYVPDGLSEAEWEAQKAAKAEAAAARKAKFAAQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQDREQAK 103
            +AL +VALVG  AAF P  P  A  R +S+ L  GY+PDGLS+AE++  K  +  AA  RK KF    FEDL++W+  RD KFP Q G GH  AKV+  E+ K
Sbjct:    4 RALLLVALVGLAAAFTPSQPLKAAVRSTSTTLSMGYIPDGLSQAEYDKLKKKEQSAAQERKKKFKFNGFEDLTDWVRARDKKFPNQPGKGHTFAKVKGDEKGK 106          
BLAST of jgi.p|Trimin1|351767 vs. uniprot
Match: A0A6H5JUI7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUI7_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.590e-8
Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 0
Query:    1 MYKALAVVALVGSVAAFAPVAPAV----ARVSSSALKAGYVPDGLSEAEWEAQKAAKAEAAAARKAKFAAQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQDREQAKPRASS 108
            M  A AVVAL    +AF    PA      R SS+A+ AGYVPDGL+  +WE  K  KA  AAARK + A++ FED+  +M   +A        GH  AKV +  +  P A +
Sbjct:    1 MKTAFAVVALFAGASAFNVAVPASRVTSTRASSTAVSAGYVPDGLTAQQWEDMKKEKAAKAAARKKEVASKKFEDIDTFMKGMEAG-----KRGHTFAKVDESLEKLPPAGA 107          
BLAST of jgi.p|Trimin1|351767 vs. uniprot
Match: A0A7S2CHM7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHM7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.680e-7
Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:    3 KALAVVALVGSVAAFAPVA-PAVARVSSSA----LKAGYVPDGLSEAEWEAQKAAKAEAAAARKAKFAAQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQ 97
            KAL +  LVG  +AF P + PA   V+ ++    L  GYVPDGL+EA++ A K  +A+ A   K      + E L+EW  + D KFP Q GAGH   K++
Sbjct:    5 KALTLFLLVGLASAFLPASGPAFTAVARNSRMQPLSMGYVPDGLTEAQFNAMKKKEADKAKKNKKTKMKGSKETLTEWKAQVDKKFPNQPGAGHVYVKLR 104          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351767 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YGV9_9STRA1.570e-64100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V559_9STRA2.470e-1947.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SUA3_9STRA6.660e-1849.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5JUI7_9PHAE2.590e-841.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2CHM7_9STRA2.680e-741.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_99contigContig_99:547635..549737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351767mRNA_12287Tribonema minus UTEX_B_3156 mRNAContig_99 547593..550049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351767|estExt_Genemark1.C_Ctg_990064 ID=Trimin1|351767|estExt_Genemark1.C_Ctg_990064|Name=jgi.p|Trimin1|351767|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=112bp
MYKALAVVALVGSVAAFAPVAPAVARVSSSALKAGYVPDGLSEAEWEAQK
AAKAEAAAARKAKFAAQTFEDLSEWMTKRDAKFPGQIGAGHRMAKVQDRE
QAKPRASSFLK*
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