Trimin1|351740|estExt_Genemark1.C_Ctg_990020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351740
Unique NameTrimin1|351740|estExt_Genemark1.C_Ctg_990020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length118
Homology
BLAST of jgi.p|Trimin1|351740 vs. uniprot
Match: A0A835YGS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGS7_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.530e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query:    1 MSNTEEKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGYTYLKSYKSRETLAAEDRQRDEDSRIETRMAQ 117
            MSNTEEKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGYTYLKSYKSRETLAAEDRQRDEDSRIETRMAQ
Sbjct:    1 MSNTEEKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGYTYLKSYKSRETLAAEDRQRDEDSRIETRMAQ 117          
BLAST of jgi.p|Trimin1|351740 vs. uniprot
Match: D7FGR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR8_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.140e-27
Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    6 EKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGYTYLKSYKSRETLAAEDRQRDEDSRIETRM 115
            +K VS+ +F + L K E+A  +F+G  +D+ ++ L DGT A IGEGYP E   +D+SP+KVV  LRNAGVP+  +F +  Y+  KSYKS ETL AE+RQ+ ED+ ++  M
Sbjct:  153 DKEVSFEDFERALLKGEVARCEFFGPNFDKAIIVLKDGTRALIGEGYPEERAFSDDSPMKVVGLLRNAGVPFTTEFRMAKYSKPKSYKSSETLEAENRQKSEDAVLDRLM 262          
BLAST of jgi.p|Trimin1|351740 vs. uniprot
Match: A0A6H5JKU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.480e-27
Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    6 EKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGYTYLKSYKSRETLAAEDRQRDEDSRIETRM 115
            +K VS  +F + L K E+A  +F+G  +D+ ++ L DGT A IGEGYP+E   +D+SP+KVV  LRNAGVP+  +F +  Y+  KSYKS ETL AE+RQ+ ED+ ++  M
Sbjct:  149 DKEVSLEDFERALLKGEVARCEFFGPNFDKAIIVLKDGTRALIGEGYPQERAFSDDSPMKVVGLLRNAGVPFTTEFRMAKYSKPKSYKSSETLEAENRQKSEDATLDRLM 258          
BLAST of jgi.p|Trimin1|351740 vs. uniprot
Match: A0A0G4GED3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GED3_VITBC)

HSP 1 Score: 68.2 bits (165), Expect = 8.180e-12
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0
Query:    9 VSYAEFNQLLFKRE----IASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGY 86
            +S+A+F + +        I    F GS+ +RCV+   DGT  R+GEGYPRESP + E+P  VVA++R   +PY    NL  Y
Sbjct:   68 LSFADFMEQIRSNAGSNPITRVTFIGSRAERCVVLYADGTRKRLGEGYPRESPTSQETPQWVVARVRELRIPYDFTINLGRY 149          
BLAST of jgi.p|Trimin1|351740 vs. uniprot
Match: A0A5J4Z3K9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3K9_PORPP)

HSP 1 Score: 59.7 bits (143), Expect = 1.140e-8
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0
Query:   23 IASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVDFNL 83
            I   +F G++Y+R  +    G +  +GEGYP+ESP T ESPL V A+LR+A +P+ VDF L
Sbjct:   96 IERVEFKGTQYNRAYV-YAGGKKLLLGEGYPKESPITPESPLAVQAKLRDAKIPFSVDFGL 155          
BLAST of jgi.p|Trimin1|351740 vs. uniprot
Match: A0A7S2BEQ4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BEQ4_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 8.490e-5
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0
Query:    6 EKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGEGYPRESPATDESPLKVVAQLRNAGVPYKVD-FNLRGY 86
            EK ++Y  F +LL   EI   +FYG   ++ V T  +G    +  G P+ES  +  SPL+ VA++R+AGVP+  + FNL  Y
Sbjct:  108 EKNIAYDNFLELLNDGEIQRVQFYGETGNKVVATT-NGERVTV-IGVPQESSNSPMSPLRTVAKVRDAGVPFTFESFNLAEY 187          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351740 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YGS7_9STRA1.530e-76100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FGR8_ECTSI1.140e-2748.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKU5_9PHAE1.480e-2748.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4GED3_VITBC8.180e-1241.46Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A5J4Z3K9_PORPP1.140e-847.54Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2BEQ4_9STRA8.490e-539.02Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_99contigContig_99:150885..152163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351740mRNA_12242Tribonema minus UTEX_B_3156 mRNAContig_99 150473..152163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351740|estExt_Genemark1.C_Ctg_990020 ID=Trimin1|351740|estExt_Genemark1.C_Ctg_990020|Name=jgi.p|Trimin1|351740|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=118bp
MSNTEEKLVSYAEFNQLLFKREIASAKFYGSKYDRCVLTLLDGTEARIGE
GYPRESPATDESPLKVVAQLRNAGVPYKVDFNLRGYTYLKSYKSRETLAA
EDRQRDEDSRIETRMAQ*
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