mRNA_12226 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|339811
Unique NamemRNA_12226
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A835YG93_9STRA (Ap4A_phos_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG93_9STRA)

HSP 1 Score: 613 bits (1580), Expect = 1.130e-220
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1
Query:    1 MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASWGAC 1008
            MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASWGAC
Sbjct:    1 MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASWGAC 336          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: UPI001A90AAD7 (DUF4922 domain-containing protein n=1 Tax=Motiliproteus sp. SC1-56 TaxID=2799565 RepID=UPI001A90AAD7)

HSP 1 Score: 134 bits (338), Expect = 9.100e-34
Identity = 74/164 (45.12%), Postives = 97/164 (59.15%), Query Frame = 1
Query:   37 ERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHAD 528
            ER R+TS+ ALA G+L  + T   ++ D   PF V  L      AKK G   V  R  R      NPF   N +PAL+V ++G+R+ C+LNKFNV++DH L++T  FEPQ APL   D       +  +PG+GFFN GP +GASQ HRH+QLVP  +L  L  D
Sbjct:    7 ERVRETSRRALASGALESIKTERLLIADPNWPFQVRILTS---LAKKHG---VSTRLARAQTQVHNPFL--NPEPALLVCEMGSRYRCVLNKFNVVEDHLLLVTRQFEPQQAPLEEADFDVLLKAIEQMPGLGFFNGGPGAGASQPHRHLQLVPEHSLGPLPVD 162          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A158G0B8_9BURK (ATP adenylyltransferase n=1 Tax=Caballeronia humi TaxID=326474 RepID=A0A158G0B8_9BURK)

HSP 1 Score: 132 bits (333), Expect = 5.020e-33
Identity = 85/205 (41.46%), Postives = 113/205 (55.12%), Query Frame = 1
Query:   46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLD 660
            RQT  A LA G+LRP+AT    ++D G+PF V  +   ++A KK         +   +  P NPF     D  LVV D+G RH  +LNKFNV+D H LI+T  FEPQ A L A D  A FA +T + G+GF+NSGP++GASQ H+H+Q+VP    R+        ALP+  L+ AA +            T+P L   HA   LD
Sbjct:   12 RQTQHA-LACGALRPIATIEKTIEDAGVPFLVRQVS--SVARKKEA-------RTMQTAAPSNPFF--PCDDNLVVADIGERHILLLNKFNVIDHHLLIVTREFEPQQALLDATDFDALFACLTQIDGLGFYNSGPEAGASQPHKHLQIVPLPLGRS------DSALPIEPLLAAACSG-----------TVPGLPFAHAFARLD 187          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A158KEF6_9BURK (ATP adenylyltransferase n=1 Tax=Caballeronia terrestris TaxID=1226301 RepID=A0A158KEF6_9BURK)

HSP 1 Score: 131 bits (330), Expect = 1.380e-32
Identity = 79/179 (44.13%), Postives = 105/179 (58.66%), Query Frame = 1
Query:   46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTV---FSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAA 573
            R+ ++ ALA G+LRP+AT    ++D G+PF V    S+  K  A K R  A            P NPF   +R+  LVV D+G RH  +LNKFNV+D H LI+T  FEPQ A L A D  A FA +  + G+GF+NSGP++GASQ H+H+Q+VP      L      PALP+  L+ AA
Sbjct:   11 RRQTQHALACGALRPIATIGKTIEDAGVPFLVRQVSSVGRKDEAKKARDAA------------PSNPFLPCDRN--LVVADIGERHILLLNKFNVIDHHLLIVTREFEPQQALLDASDFDALFACLAQIDGLGFYNSGPEAGASQPHKHLQIVP------LPLGQPGPALPIEPLLAAA 169          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A2T4V0F9_VITXG (ATP adenylyltransferase n=1 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4V0F9_VITXG)

HSP 1 Score: 129 bits (324), Expect = 2.290e-31
Identity = 79/208 (37.98%), Postives = 114/208 (54.81%), Query Frame = 1
Query:   40 RARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDP 663
            R  +T++ ALA G+L+P+AT    +++  +PF V  L    L   +        ++++    P NPF  EN DP +VVGDV   HTC+LNKFNV++ H L++T  FE Q +PLTA D  A    ++ L G+ F+NSG  +GASQRH+H+QL+P    + L A       P+ TL+ A        P  G   T+P L   H +  L P
Sbjct:   20 RTLETTRNALATGALQPIATECQTLEEREVPFQVRVLGRAHLKDDRA-------KREKPRAAPFNPF--ENPDPVMVVGDVPPAHTCMLNKFNVVEHHLLLVTRIFEEQESPLTAADFEALAFCMSGLDGLAFYNSGEMAGASQRHKHLQLIPPLGPQGLRA-------PMETLLSAP-------PARGHVTTVPALNFLHVLTGLGP 204          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: UPI00194DE2BD (phosphorylase n=1 Tax=Halomicronema sp. CCY15110 TaxID=2767773 RepID=UPI00194DE2BD)

HSP 1 Score: 129 bits (323), Expect = 2.930e-31
Identity = 106/320 (33.12%), Postives = 144/320 (45.00%), Query Frame = 1
Query:   49 QTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFT---LPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASW 999
            QT+  ALA G+L P+AT    + DGGIPF V  +D  A  A          ++ R S  P NPF     +PAL V D+   H C+LNKFNV++ H L+IT  +  Q + LT +D AA+   + A+ G+GF+NSGP SGASQ H+H+QLVP+        D  T  LP+  ++          P P    T   L  L  +H  + L      D            ++GA L+  Y  LL  +G           T   P  +                        YNL+LTRD+M VVAR+R P        S  +A W
Sbjct:   18 QTTTQALASGALMPIATHTHTLADGGIPFVVRLVDSLARKAHHEKA-----QRDRPSRQPANPFL--PYEPALFVADLSPTHVCLLNKFNVVEHHLLVITRDYVAQESWLTLEDFAAWARCIQAIDGLGFYNSGPISGASQHHKHLQLVPFAD------DDGTATLPMAQIL----------PPPSTASTPAFLSSLPFQHRWQPLHLDWRQD----------HHSLGAQLRLTYRHLLAALG----------LTLTTPHPE----------------------QPYNLLLTRDWMMVVARSR-PGYADIGVNSLGYAGW 271          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A4U1IFM8_9BURK (Phosphorylase n=1 Tax=Trinickia sp. 7GSK02 TaxID=2571161 RepID=A0A4U1IFM8_9BURK)

HSP 1 Score: 127 bits (320), Expect = 1.070e-30
Identity = 87/211 (41.23%), Postives = 114/211 (54.03%), Query Frame = 1
Query:   46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGD 678
            +QTS A L  G+L+P+A+    + D G+ F V  +   A    ++  A      +  + +P NPF     DP L V D+   H  +LNKFNV+D H LI+T SF PQ  PL A D AA+ A +    G+GF+NS  ++GASQ H+H+Q+VP      L   A    LP+  LV   AAA  R    GA  TLP L  RHA   LDPA AGD
Sbjct:   18 KQTSHA-LHCGALQPIASDERTIDDAGVRFIVRQVSSLA----RKNAAKTAPAARTVASVPVNPFL--PHDPNLFVADISETHFALLNKFNVIDHHLLIVTRSFIPQDTPLDAADFAAWLACLAEFDGLGFYNSCTEAGASQPHKHLQIVP------LPLGAAGLRLPIEPLV---AAAQWR----GAIGTLPGLPFRHAFAALDPA-AGD 207          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A836C9Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.980e-30
Identity = 114/321 (35.51%), Postives = 153/321 (47.66%), Query Frame = 1
Query:   49 QTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLD-----EKALAAKKRGGASVCGRKQRFSGLPP----------NPFAGENRDPALVVGD-VGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPG----ATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARA 951
            + + A+ A G L+P+ATS   V DGGI F V ++      EKA  +    GA+  G                    +PFA E+RD  +VV   V   H  +LNKF  L  HAL++T++F  Q+ PLTA D AA++A V A   VGFFNS  ++GASQRH+HMQLVP   L +      +  LP+++ +  A A             A F LP  K +H + LL P  A   G  XXXXX     G  L   Y  LLR  G    +L   +  G   F   AG++                 A +N++LT  +M VV RARA
Sbjct: 1180 RATHASAAAGLLKPIATSCRRVHDGGIDFIVSTVSAARQAEKAAKSNLTPGAADGGXXXXXXXXXXXXXXXXXXARDPFARESRDARMVVAPRVPPEHVLVLNKFPTLAGHALLVTDAFREQATPLTAGDFAAWYAVVAAADAVGFFNSAAEAGASQRHKHMQLVP---LASFAPCTQSRGLPIDSAISMATARTSTVTAANDSEAAIFRLPNFKFKHGLTLLPPESALLHGXXXXXXX----AGMPLLAIYSALLRRTG----LLDCAAAPGDCAFAGGAGSSGCGDSGGGSTVAPAAALAPHNVLLTTRWMLVVPRARA 1489          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A158GD20_9BURK (ATP adenylyltransferase n=1 Tax=Caballeronia choica TaxID=326476 RepID=A0A158GD20_9BURK)

HSP 1 Score: 124 bits (312), Expect = 8.990e-30
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 1
Query:   46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAA 573
            RQT  A LA G+LRP+ T+ T V+D  + F V  +       +K        RK+R +  P NPF   + D  LVV D+G+ H  +LNKFNV+D H LI+T  FEPQ A +T  D AA F  +    G+GF+N GP++GASQ H+H+Q+VP    R        P+LP+  L+ AA
Sbjct:   17 RQTQHA-LACGALRPIETTQTTVEDANVTFLVRQVSS---VVRKE-----ADRKKREAAPPVNPFLPCDAD--LVVADIGDSHILLLNKFNVIDQHLLIVTRHFEPQEALITLSDFAALFVCLDQFDGLGFYNGGPEAGASQPHKHLQIVPLPLGRP------GPSLPIEPLLAAA 175          
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A2N7WG82_9BURK (Phosphorylase n=1 Tax=Trinickia soli TaxID=380675 RepID=A0A2N7WG82_9BURK)

HSP 1 Score: 124 bits (310), Expect = 2.080e-29
Identity = 84/201 (41.79%), Postives = 109/201 (54.23%), Query Frame = 1
Query:   64 ALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPA 666
            ALA G+LRP+ T  T + D GI F V  +   +L  K+R   S     QRF     +PF     DP L V DV   H  +LNKFNV+D H LI+T +FEPQ A L  DD AA+FA +T    +GF+N G ++GASQ H+HMQ+VP      L    +  +LP+  L+ AA+         G   TLP L   HA   L+PA
Sbjct:   22 ALACGALRPIETVQTTLDDSGIRFVVRQVS--SLVGKRRQETSA---PQRFV----DPFL--PHDPDLFVADVSATHFALLNKFNVIDHHLLIVTRAFEPQEALLDLDDFAAWFACLTEFDALGFYNGGREAGASQPHKHMQVVP------LPLGDSGQSLPIAPLIEAASF-------DGPVGTLPGLPFGHAFARLEPA 198          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YG93_9STRA1.130e-220100.00Ap4A_phos_N domain-containing protein n=1 Tax=Trib... [more]
UPI001A90AAD79.100e-3445.12DUF4922 domain-containing protein n=1 Tax=Motilipr... [more]
A0A158G0B8_9BURK5.020e-3341.46ATP adenylyltransferase n=1 Tax=Caballeronia humi ... [more]
A0A158KEF6_9BURK1.380e-3244.13ATP adenylyltransferase n=1 Tax=Caballeronia terre... [more]
A0A2T4V0F9_VITXG2.290e-3137.98ATP adenylyltransferase n=1 Tax=Vitiosangium sp. (... [more]
UPI00194DE2BD2.930e-3133.13phosphorylase n=1 Tax=Halomicronema sp. CCY15110 T... [more]
A0A4U1IFM8_9BURK1.070e-3041.23Phosphorylase n=1 Tax=Trinickia sp. 7GSK02 TaxID=2... [more]
A0A836C9Y6_9STRA2.980e-3035.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A158GD20_9BURK8.990e-3042.05ATP adenylyltransferase n=1 Tax=Caballeronia choic... [more]
A0A2N7WG82_9BURK2.080e-2941.79Phosphorylase n=1 Tax=Trinickia soli TaxID=380675 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_99contigContig_99:24202..25771 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|339811|MIX48574_4_26
BRITEko00000,ko00001,ko01000
KEGG rclassRC00002,RC02753,RC02795
KEGG ReactionR00126,R01618
KEGG Pathwayko00230,map00230
KEGG koko:K00988
EC2.7.7.53
DescriptionATP adenylyltransferase
COG categoryF
Max annot lvl28216|Betaproteobacteria
EggNOG OGsCOG4360@1|root,COG4360@2|Bacteria,1RDRJ@1224|Proteobacteria,2VSAU@28216|Betaproteobacteria,1K35M@119060|Burkholderiaceae
Evalue6.29e-30
Seed ortholog640512.BC1003_5471
Hectar predicted targeting categoryother localisation
TranscriptId340133
TrackFilteredModels1
ProteinId339811
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|339811gene_12226Tribonema minus UTEX_B_3156 geneContig_99 24202..25771 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|339811Trimin1|339811|MIX48574_4_26Tribonema minus UTEX_B_3156 polypeptideContig_99 24202..25771 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12226_3exon_12226_3Tribonema minus UTEX_B_3156 exonContig_99 24202..24766 -
exon_12226_2exon_12226_2Tribonema minus UTEX_B_3156 exonContig_99 25072..25184 -
exon_12226_1exon_12226_1Tribonema minus UTEX_B_3156 exonContig_99 25439..25771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12226CDS_12226Tribonema minus UTEX_B_3156 CDSContig_99 25439..25771 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12226 ID=mRNA_12226|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_99:24202..25771- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGCATCGACACAACGCAAAAGTTCCCTCTGCGGGAGCGGGCAAGGCA
GACCAGCAAGGCAGCGCTGGCAGGCGGCTCATTGCGACCCCTGGCCACCA
GCCATACAGTCGTGCAGGACGGTGGCATCCCGTTCACCGTCTTCTCGCTT
GACGAGAAAGCGCTGGCTGCAAAGAAGCGGGGTGGTGCGTCCGTGTGTGG
ACGAAAGCAGAGGTTCAGCGGTTTGCCACCGAATCCCTTCGCGGGGGAGA
ACAGGGACCCAGCGCTGGTGGTGGGCGACGTGGGTAACAGGCATACCTGT
ATACTCAACAAATTTAACGTCCTGGACGACCACGCCCTCATCATCACAAA
CAGTTTTGAGCCCCAGAGCGCGCCGCTGACCGCGGACGACCTGGCGGCCT
TTTTTGCGGGGGTTACGGCCCTGCCTGGGGTGGGCTTCTTCAATAGCGGC
CCCCAGAGCGGCGCGAGCCAGCGCCACCGCCACATGCAGCTCGTGCCGTA
CGACACGCTGCGCGCGCTGCACGCGGACGCGACGACGCCCGCGCTGCCGC
TCAACACACTCGTGCGCGCCGCCGCCGCCGCCGCGCGCCGCGCCCCGCGC
CCGGGCGCCACCTTCACGCTGCCGCAGCTCAAGCTGCGCCACGCGGTGCG
GCTGCTGGACCCCGCGGTGGCGGGCGACTGCGGCGGCAGCGGCGGCGGCG
GCGGCGGCGCGGCGGCCGTCGGCGCGTACCTCAAGCGCCAGTACGATGAG
CTGCTGCGCGACGTCGGCTACGCGTTCCCCGTGCTGCGCGCCAACTCGTT
CACGGGGCAGGCGCCGTTCGACGACATCGCCGGCGCCGCCGCCGCCGAGG
CGCAGCAGTGCGGCGGCGCGCGCCGCGGCGGCGGCGCCGCCGCCGGCTAC
AACCTGGTGCTGACGCGTGACTACATGTTCGTCGTCGCGCGCGCGCGCGC
GCCGCGGACCCCGCCACCGGCATCGACGTCAACGCGATGGGCTTCCTGGG
GTGCCTGCTGA
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protein sequence of jgi.p|Trimin1|339811

>Trimin1|339811|MIX48574_4_26 ID=Trimin1|339811|MIX48574_4_26|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp
MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSL
DEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTC
ILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSG
PQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPR
PGATFTLPQLKLRHAVRLLDPAVAGDCGGSGGGGGGAAAVGAYLKRQYDE
LLRDVGYAFPVLRANSFTGQAPFDDIAGAAAAEAQQCGGARRGGGAAAGY
NLVLTRDYMFVVARARAPRTPPPASTSTRWASWGAC*
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mRNA from alignment at Contig_99:24202..25771-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12226 ID=mRNA_12226|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1570bp|location=Sequence derived from alignment at Contig_99:24202..25771- (Tribonema minus UTEX_B_3156 )
ATGTGCATCGACACAACGCAAAAGTTCCCTCTGCGGGAGCGGGCAAGGCA GACCAGCAAGGCAGCGCTGGCAGGCGGCTCATTGCGACCCCTGGCCACCA GCCATACAGTCGTGCAGGACGGTGGCATCCCGTTCACCGTCTTCTCGCTT GACGAGAAAGCGCTGGCTGCAAAGAAGCGGGGTGGTGCGTCCGTGTGTGG ACGAAAGCAGAGGTTCAGCGGTTTGCCACCGAATCCCTTCGCGGGGGAGA ACAGGGACCCAGCGCTGGTGGTGGGCGACGTGGGTAACAGGCATACCTGT ATACTCAACAAATTTAACGTCCTGGACGACCACGTGAGTCTCGGCCTGAA CCTTTTGCTTGCCAAACACAGCAGTGAATAAGCGTTACGTCGTTGACACT GACATTGCGTGCAGTGATTTAGTGTCGCTTCTGCTGGAGCACGTGCCATT CATCAGATCCAAACTCCGTAGGCCATCATACCTATTGCGGCCATGGCTCC GCTCAGCTCAGCGCACTTTTTGCGGATTTGACAGGCGGCACCTGACAAAC CTACCCCCCCCTTGCTGTGCTTCCGAAACGCCCTCAGGCCCTCATCATCA CAAACAGTTTTGAGCCCCAGAGCGCGCCGCTGACCGCGGACGACCTGGCG GCCTTTTTTGCGGGGGTTACGGCCCTGCCTGGGGTGGGCTTCTTCAATAG GTGAGCTGCAACCGACAGCAGTTGCTGCTGCCGCCGAGGGGTCCTGTTTT CTCATGCTGTCATGATGGCATCGTCTGCTCGCCATGCCCGTCAAAAGCGC TGTAGCCTTTGTGAATGCCTGCACATGTGTCAAGGCCAGGCCGCCGGCTC TCGAGCCAGCATGGCGCAGCCGACATGAACAGCTGCATAGTGCTTTGAAA TAATAATCGTGCAGACACACCGAATCCGACCACAGTTGAAGTTCCGCACA GGCACTGACGCCCCCCTTTCCGCCCCCTACCCCCCTACCCCCCCCTCGTT CGCAGCGGCCCCCAGAGCGGCGCGAGCCAGCGCCACCGCCACATGCAGCT CGTGCCGTACGACACGCTGCGCGCGCTGCACGCGGACGCGACGACGCCCG CGCTGCCGCTCAACACACTCGTGCGCGCCGCCGCCGCCGCCGCGCGCCGC GCCCCGCGCCCGGGCGCCACCTTCACGCTGCCGCAGCTCAAGCTGCGCCA CGCGGTGCGGCTGCTGGACCCCGCGGTGGCGGGCGACTGCGGCGGCAGCG GCGGCGGCGGCGGCGGCGCGGCGGCCGTCGGCGCGTACCTCAAGCGCCAG TACGATGAGCTGCTGCGCGACGTCGGCTACGCGTTCCCCGTGCTGCGCGC CAACTCGTTCACGGGGCAGGCGCCGTTCGACGACATCGCCGGCGCCGCCG CCGCCGAGGCGCAGCAGTGCGGCGGCGCGCGCCGCGGCGGCGGCGCCGCC GCCGGCTACAACCTGGTGCTGACGCGTGACTACATGTTCGTCGTCGCGCG CGCGCGCGCGCCGCGGACCCCGCCACCGGCATCGACGTCAACGCGATGGG CTTCCTGGGGTGCCTGCTGA
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Coding sequence (CDS) from alignment at Contig_99:24202..25771-

>mRNA_12226 ID=mRNA_12226|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1011bp|location=Sequence derived from alignment at Contig_99:24202..25771- (Tribonema minus UTEX_B_3156 )
ATGTGCATCGACACAACGCAAAAGTTCCCTCTGCGGGAGCGGGCAAGGCA
GACCAGCAAGGCAGCGCTGGCAGGCGGCTCATTGCGACCCCTGGCCACCA
GCCATACAGTCGTGCAGGACGGTGGCATCCCGTTCACCGTCTTCTCGCTT
GACGAGAAAGCGCTGGCTGCAAAGAAGCGGGGTGGTGCGTCCGTGTGTGG
ACGAAAGCAGAGGTTCAGCGGTTTGCCACCGAATCCCTTCGCGGGGGAGA
ACAGGGACCCAGCGCTGGTGGTGGGCGACGTGGGTAACAGGCATACCTGT
ATACTCAACAAATTTAACGTCCTGGACGACCACGCCCTCATCATCACAAA
CAGTTTTGAGCCCCAGAGCGCGCCGCTGACCGCGGACGACCTGGCGGCCT
TTTTTGCGGGGGTTACGGCCCTGCCTGGGGTGGGCTTCTTCAATAGCGGC
CCCCAGAGCGGCGCGAGCCAGCGCCACCGCCACATGCAGCTCGTGCCGTA
CGACACGCTGCGCGCGCTGCACGCGGACGCGACGACGCCCGCGCTGCCGC
TCAACACACTCGTGCGCGCCGCCGCCGCCGCCGCGCGCCGCGCCCCGCGC
CCGGGCGCCACCTTCACGCTGCCGCAGCTCAAGCTGCGCCACGCGGTGCG
GCTGCTGGACCCCGCGGTGGCGGGCGACTGCGGCGGCAGCGGCGGCGGCG
GCGGCGGCGCGGCGGCCGTCGGCGCGTACCTCAAGCGCCAGTACGATGAG
CTGCTGCGCGACGTCGGCTACGCGTTCCCCGTGCTGCGCGCCAACTCGTT
CACGGGGCAGGCGCCGTTCGACGACATCGCCGGCGCCGCCGCCGCCGAGG
CGCAGCAGTGCGGCGGCGCGCGCCGCGGCGGCGGCGCCGCCGCCGGCTAC
AACCTGGTGCTGACGCGTGACTACATGTTCGTCGTCGCGCGCGCGCGCGC
GCCGCGGACCCCGCCACCGGCATCGACGTCAACGCGATGGGCTTCCTGGG
GTGCCTGCTGA
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