mRNA_5149 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|174789
Unique NamemRNA_5149
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A835ZCW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW7_9STRA)

HSP 1 Score: 712 bits (1839), Expect = 1.530e-259
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1
Query:    1 MSQSRTWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAACST 1062
            MSQSRTWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAACST
Sbjct:    1 MSQSRTWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAACST 354          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A835Z6K4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6K4_9STRA)

HSP 1 Score: 602 bits (1553), Expect = 6.330e-216
Identity = 302/353 (85.55%), Postives = 320/353 (90.65%), Query Frame = 1
Query:    1 MSQSRTWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAACS 1059
            MSQSRTWF+ELFGFAEEGNHSYHDVQSMF +  TQLTSIANGR  + GTFTTPTL+E RRKG +AL S+S +  RRHGVHV HTTV +IM MHYEYPGAVFQAASQFNCLEFPDP TTPE GITQYAFDNTQGPACALACAAGTVLRNY+VKMPGGGRGQTAARQLNMLDELEEA+DN A KYFLVKNGY+TSTS  LAALA VLS+DMDALVKVGLHE VGVTFSGRT  GRYIQP G+P +VTQVYCSA+SIGYSGIAAREWELLA VVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPK WIA +IG AVQ L+AAGADLDVHVCHYR+VD HMARMIDAACS
Sbjct:    1 MSQSRTWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLSEDMDALVKVGLHEGVGVTFSGRTH-GRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAACS 352          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A067CPF5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPF5_SAPPC)

HSP 1 Score: 264 bits (674), Expect = 1.210e-82
Identity = 159/355 (44.79%), Postives = 202/355 (56.90%), Query Frame = 1
Query:   19 WFKELFGFAEEGNHSYHDVQSMFGI-HSTQLTSIANGRESDVGTFTTPTLKEQR-------RKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVL----SDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMID 1047
            WFK LFGF E+G  +Y +VQ+ F I + TQL S+ NG+  D+GTF   +L   R       R GH  L  A++K                ++H       A FQAASQFNCLEF  P   PE G+T YA D TQGPACA+A   GTV RNY        +GQ AA Q+N L+++E+ +DN   +YF V NGY  +T++ L  L  VL    +DD++  +KVG+H  V V F  R    R   P      VTQVYCSA+S GYS  +A  W   A +VL A YEATLWAA++NA +TG  QVFLT +GGGVF N   WI +AI +AV   HA   DLDV + HY  VD  +   +D
Sbjct:    3 WFKTLFGFREKGL-AYDEVQAKFEIVNETQLCSLTNGKTYDIGTFECLSLATLRDHAMCVGRLGHVRLTHAASKD-------------VFLLHCDPRNRHATFQAASQFNCLEFAHPRARPEDGVTIYAHDMTQGPACAIAAGPGTVFRNYFASPDADQQGQRAASQINNLEDVEDMLDNERHQYFRVVNGYTDATNASLQRLNDVLETANTDDLENALKVGVHWNVEVPFQARY---RPSSPSSDKQLVTQVYCSAISCGYSYASATAWAPFASLVLRASYEATLWAAIINASITGSTQVFLTVLGGGVFGNKTAWILDAIAVAVAKCHAF--DLDVVIVHYMKVDKALVTALD 338          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A024U7R5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7R5_9STRA)

HSP 1 Score: 250 bits (638), Expect = 4.620e-77
Identity = 158/355 (44.51%), Postives = 196/355 (55.21%), Query Frame = 1
Query:   19 WFKELFGFAEEGNHSYHDVQSMFGI--HSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASAST--KRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAAL-ATVLSDD-----MDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAA 1053
            WF+ LFGF E  +++Y DVQ  F +   +T L S  NG+   +GTF   +L   R  G        T  +      V +DH    N          A+FQAASQ NCLEF  P   PEQG+T+Y  D TQGPACA+A   GTV RNY V + GG  GQTA  Q+N LD+++  + N   KYF V NGY  STS  L  L  TVL DD     +   +K+GLH  V V F  R       +P      V+Q YCSA+S+GYS  +AR+W   A++VL+A YEATLWA VLN Q TG  +VFLT VGGGVF N   WI +AI  AV  +   G  LDV + HYR VD    R +  A
Sbjct:   13 WFRALFGFREL-DYAYDDVQGKFELLNDATVLRSTVNGKAYTIGTFECMSLGALRSAGRDTAVGGETTVRHEASRDVFLDHCDTNN--------KDALFQAASQLNCLEFMSPRCVPEQGVTRYNRDLTQGPACAIAAGPGTVYRNYFVPV-GGRTGQTATSQVNNLDDVQAMLANDVHKYFDVVNGYTDSTSRQLGKLNTTVLCDDSMRGKLSDAIKIGLHWNVQVPFVARYMPVAATRPIHC---VSQAYCSAISVGYSAASARDWAPFAKLVLEASYEATLWAGVLNYQRTGCNKVFLTAVGGGVFGNATEWIVDAIASAVAAVARCG--LDVVLVHYRRVDESFQRDLAVA 352          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: T0R4Z5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R4Z5_SAPDV)

HSP 1 Score: 249 bits (635), Expect = 1.030e-76
Identity = 152/350 (43.43%), Postives = 195/350 (55.71%), Query Frame = 1
Query:   19 WFKELFGFAEEGNHSYHDVQSMFGI-HSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYE--YPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVL----SDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMID 1047
            WFK LFGF E+G  +Y ++Q+ F I + TQL S+ N +  D+GTF   +L   R   H           R   + V H    ++  +H +  +  A FQAASQFNCLEF  P   PE G+T YA D TQGPACA+A   GTV RNY        +GQ A  Q+N LD++E  +DN   +YF V NGY  +T++ L  L  VL    ++D++  +KVG+H  V V F  R        P      VTQVYCSA+S GYS  +   W   A +VL A YEATLWAA++NA  TG  +VFLT +GGGVF N   WI +AI  AV   HA   DLDV V HY  VD  +   +D
Sbjct:    3 WFKTLFGFREKGL-AYDEIQAKFEIVNETQLRSVTNDKAYDIGTFECLSLATLR--DHAMCVG------RLGQLRVTHVASKDVFLLHCDPLHRNATFQAASQFNCLEFAHPRARPEDGVTIYARDMTQGPACAIAAGPGTVFRNYFASPDADLQGQRATSQINNLDDVEVILDNERHQYFHVVNGYTDATNASLQRLNDVLETADNNDLEDALKVGVHWNVEVPFKARY---HPTSPSSDKQLVTQVYCSAISCGYSYASTTAWAPFASLVLRASYEATLWAAIINASTTGSNRVFLTVLGGGVFGNKTTWILDAIAAAVAKCHAF--DLDVVVVHYLKVDKALVTALD 338          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A1V9YR91_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR91_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.300e-75
Identity = 156/361 (43.21%), Postives = 203/361 (56.23%), Query Frame = 1
Query:   19 WFKELFGFAEEGNHSYHDVQSMFG-IHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPG--AVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGR--------GQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLS----DDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAK-VTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAA 1053
            WF+ LFGF E+G  SY +VQ+ F  +   QL S ANG   D+GTF   +L   R     AL   ST +     V V H    ++  MH +     AVFQAASQFNCLEF  P   PE G+T YA D TQGPACA+A    TV RNY+V M             GQT + Q+N LD++E+ + N   +YF V NGY  +T+  LA L T+LS    D +   +K+G+H    V F  R      ++   +P + VTQ YCSALS GYS  + + W   AR+VL A YEA LW AV+NA +TG  +V+LT +GGGVFAN + WI +AI LAV        +LDV V HY+ VD  +   ++ A
Sbjct:    3 WFRVLFGFEEKGR-SYAEVQAQFELVGKRQLRSRANGATFDIGTFECLSLAVLRE---HALGVGSTGQ-----VRVSHVASNDVFLMHCDPSNHHAVFQAASQFNCLEFAHPRAKPENGVTIYALDMTQGPACAIAAGPATVFRNYLVPMRSNDANGCAIERAGQTGSCQINNLDDIEDLLGNEEHQYFHVVNGYTDATNQSLARLNTLLSTVAEDALCDALKIGVHWHAQVPFRARYK----MRSADAPKQLVTQAYCSALSCGYSYASTKFWAPFARLVLKASYEAALWTAVINAAMTGCHKVYLTILGGGVFANEQSWIIDAIALAVNKCREF--ELDVIVVHYKRVDVKVVNELEKA 348          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A2D9TE96_9DELT (Uncharacterized protein n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TE96_9DELT)

HSP 1 Score: 244 bits (624), Expect = 2.680e-75
Identity = 155/351 (44.16%), Postives = 203/351 (57.83%), Query Frame = 1
Query:   16 TWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDL----AALATVLSDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQL-TGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAA 1053
            TWF++LFGF E    ++ + +S F +   +L ++  GR   VGTF TPTL   R +  +  A  +     RH     H  + +++ +H  + GA+FQAASQFNCLEFP P TTPE G+T YA D TQGPAC+LA AA TV RNY   + G   GQTA  QLN L  +  A+ +   K   V+NGY  S  + L    AAL T+  DD+   ++VG+     VTF+ R       QP  +P  V+Q +CSALS GYS  +   W  LA++VLD  YEATL AA  + +   G   V+LTF+GGGVF N   WIA+AIG A++   AA   LDV V HYR VD  M  MI+ A
Sbjct:    3 TWFQDLFGFPET---TWAETRSRFAVEGEELVALPTGRRFGVGTFATPTLHALRERS-EGFAPGTL----RHA----HVAIGDVLELHAAHEGAMFQAASQFNCLEFPGPDTTPEDGVTGYAHDPTQGPACSLAAAAATVYRNYFAPV-GEHVGQTAQHQLNGLAGVLRALGDAGTKVE-VRNGYTFSDDARLEPLNAALETLDRDDLMGGLRVGIQSRCAVTFASR------FQPPDAPRHVSQAFCSALSCGYSPGSLARWRGLAKLVLDGAYEATLLAAAQDREDGRGSGVVWLTFLGGGVFGNSPVWIADAIGRALR--RAAHLPLDVRVAHYRRVDDGMVTMIEQA 331          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A485LIK9_9STRA (Aste57867_21038 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIK9_9STRA)

HSP 1 Score: 241 bits (615), Expect = 8.110e-74
Identity = 154/356 (43.26%), Postives = 205/356 (57.58%), Query Frame = 1
Query:   19 WFKELFGFAEEGNHSYHDVQSMFGI--HSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYP--GAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSDD-------MDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAA 1053
            WF++LFGF E+ + SY D Q+ F    + T+L +  NG+  +VGTF   +L   R+      A+ +  RP      V H   T++  +H +    GA+FQ ASQFNCLEF  P   PE G+T YA DNTQGPACA+A    TV+RNY  ++ G   GQTAA QLN LD ++  +         V NGY  ST + LAAL   L+ D        DAL K+G+H  V V F+ R    R +  H +P  V+QVYCSA+S+GYS  ++  W   A +VL+A YEATLWA VLN + TG   VFLT +GGGVF N + WI  AI  A+  + A G  LDV V H+R VD  +   +++A
Sbjct:    4 WFEQLFGFREK-DFSYADRQAQFEFLENGTKLRARPNGQTYEVGTFECLSLAHLRQVARDDAAAVTRTRP----TTVRHIASTDVFLLHCDRDNRGALFQGASQFNCLEFVSPRGIPENGVTCYAMDNTQGPACAIAAGPATVVRNYFARV-GDQVGQTAAHQLNNLDGVQRLLPPSCLD---VVNGYTDSTDARLAALNKCLAADPALRTAATDAL-KIGVHWHVQVPFADR----RTVLTHAAPHVVSQVYCSAISVGYSAASSAAWAPFASLVLEASYEATLWAGVLNCRQTGCPTVFLTLLGGGVFRNREDWIVGAIAKALGAVAAYG--LDVVVVHFRHVDRSIVDALESA 343          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: A0A3D2CB01_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D2CB01_9DELT)

HSP 1 Score: 240 bits (612), Expect = 2.990e-73
Identity = 167/353 (47.31%), Postives = 197/353 (55.81%), Query Frame = 1
Query:   16 TWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYE--YPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSD-DMDALV---KVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAV-LNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAA 1053
            TWF+ LFGF  EG + +   Q  F      LTS  NGR   VGTF+TP++   R +         T R         H  V +I   H +    GAVFQAASQ NCLEF  P   PE G+TQYA D TQGPACALA AAGTVLRNY   + GG  GQTA RQLN L  ++ A+   A     V+NGY  S    L  L   L++ D DALV   +VG+  +VGVTFS      RYI P   P  V+Q+Y SALS GYS  +   W  LA + L+  YEATL AA  L A   G   V+LT +GGGVF N   WIA+AIG A+    A   DLDV V HYR VDA  A +IDAA
Sbjct:   17 TWFETLFGF-REGPYDW--TQQQFHFEPGTLTSRVNGRRFPVGTFSTPSVATLRERVVGLSPGTLTLR---------HQAVDDIFAAHAQPASAGAVFQAASQLNCLEFAAPDVVPEDGVTQYASDPTQGPACALAAAAGTVLRNYFAPV-GGIEGQTADRQLNNLAGVQAAL-GPAGALVEVRNGYTFSNDLALDRLNAALAERDRDALVAAVRVGVQASVGVTFS-----QRYI-PLSEPQTVSQIYASALSCGYSAGSLNRWAPLATIALEGAYEATLLAAAALKASGEGSGVVWLTLLGGGVFGNRDAWIADAIGRAIA--KAQHHDLDVRVAHYRRVDARRAALIDAA 347          
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Match: UPI00198F15B8 (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI00198F15B8)

HSP 1 Score: 239 bits (610), Expect = 4.990e-73
Identity = 152/357 (42.58%), Postives = 203/357 (56.86%), Query Frame = 1
Query:    4 SQSRTWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHY--EYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSD-DMDAL---VKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAA-VLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAA 1053
            S++  WF++LFGF E G   Y + +    I    L S AN R   +G F TP+L E R +  +A          R  + V H  + +++ +H   E   A+FQ ASQFNCLEF  P  TPE G+T YA+D TQGPAC+LA AA TV RNY V + GG  GQT  RQ++ L  L+  +      Y+ V NGY  S    LA L   L++ D ++L   + +GLHE VGVTF+      R+ +P   P +V+Q  CSALS GYS +A  +WE LA +VLDA YEATL AA V+        +V+LT +GGG F N   WI  AIG A+ V+   GA LDV + HYR +D+ +   I+ A
Sbjct:    5 SETGDWFEQLFGFVERG---YDETRRQLVIEDDMLRSRANDRVFPIGRFGTPSLAELRERTAEAP---------RGELRVTHVAIGDVLELHAMPENRDALFQVASQFNCLEFASPHVTPEDGVTGYAYDPTQGPACSLAAAAATVYRNYFVPV-GGKPGQTRDRQIDNLAGLDRRLGEPGA-YWTVVNGYTNSEPHRLARLERALAERDRESLLGEIAIGLHEGVGVTFA-----DRFTEPT-QPTRVSQALCSALSCGYSDVAHADWEPLATLVLDAAYEATLRAALVVPRDADATAKVWLTRLGGGAFGNRMEWITAAIGRALAVMD--GARLDVRIAHYRRIDSSVQADIEQA 339          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174789 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCW7_9STRA1.530e-259100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6K4_9STRA6.330e-21685.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067CPF5_SAPPC1.210e-8244.79Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A024U7R5_9STRA4.620e-7744.51Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
T0R4Z5_SAPDV1.030e-7643.43Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9YR91_9STRA2.300e-7543.21Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A2D9TE96_9DELT2.680e-7544.16Uncharacterized protein n=1 Tax=Sandaracinus sp. T... [more]
A0A485LIK9_9STRA8.110e-7443.26Aste57867_21038 protein n=1 Tax=Aphanomyces stella... [more]
A0A3D2CB01_9DELT2.990e-7347.31Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
UPI00198F15B84.990e-7342.58Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_117contigContig_117:462555..463619 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|174789|e_gw1.117.5.1
Max annot lvl2759|Eukaryota
EggNOG OGs28ID6@1|root,2RZ3W@2759|Eukaryota
Evalue7.57e-78
Seed ortholog157072.XP_008869745.1
Hectar predicted targeting categoryother localisation
TranscriptId175111
TrackFilteredModels1
ProteinId174789
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174789gene_5149Tribonema minus UTEX_B_3156 geneContig_117 462555..463619 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5149_1exon_5149_1Tribonema minus UTEX_B_3156 exonContig_117 462555..463619 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5149CDS_5149Tribonema minus UTEX_B_3156 CDSContig_117 462555..463619 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174789Trimin1|174789|e_gw1.117.5.1Tribonema minus UTEX_B_3156 polypeptideContig_117 462555..463619 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5149 ID=mRNA_5149|Name=jgi.p|Trimin1|174789|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1065bp|location=Sequence derived from alignment at Contig_117:462555..463619+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCCAAAGTCGTACCTGGTTCAAGGAGCTGTTTGGGTTTGCCGAGGA
AGGCAATCACAGCTACCACGACGTGCAATCCATGTTTGGAATTCACAGCA
CGCAACTGACCAGCATTGCGAACGGTCGCGAGTCTGATGTTGGCACATTC
ACTACGCCGACTCTGAAGGAACAGCGTCGTAAAGGACATCAAGCACTAGC
ATCTGCATCTACGAAACGGCCAAGGCGACACGGCGTGCATGTTGATCACA
CCACTGTCACTAATATCATGCACATGCACTATGAATACCCAGGTGCTGTT
TTTCAAGCGGCGTCGCAGTTCAACTGCTTGGAGTTTCCTGACCCTCTCAC
GACACCGGAGCAGGGCATCACACAATATGCTTTTGATAATACGCAAGGCC
CGGCGTGCGCGTTGGCGTGTGCGGCGGGCACGGTGTTGAGAAACTATATG
GTCAAAATGCCCGGCGGGGGGCGCGGGCAGACGGCGGCACGGCAGCTGAA
CATGCTAGACGAGCTTGAAGAGGCTATTGACAACCGCGCGTGTAAATATT
TTCTCGTGAAAAACGGTTACGTCACGTCTACAAGTAGTGACCTAGCTGCA
CTAGCGACCGTTCTCTCTGACGACATGGACGCTCTTGTGAAGGTGGGGCT
CCATGAAGCGGTCGGTGTCACCTTCAGCGGGCGTACCGCAGGCGGCCGAT
ACATTCAACCTCACGGCTCACCAGCAAAAGTAACGCAGGTGTACTGTTCA
GCATTGAGTATAGGCTACAGCGGCATCGCTGCCCGTGAGTGGGAACTCCT
GGCGCGCGTGGTGCTTGACGCGATATACGAAGCCACACTGTGGGCAGCTG
TCCTGAACGCGCAGCTGACTGGCGTGCGCCAGGTCTTTTTGACTTTCGTT
GGAGGCGGCGTGTTCGCCAACCCCAAGCGCTGGATCGCTGAGGCTATTGG
GCTCGCGGTACAGGTGCTTCACGCTGCAGGAGCGGATCTGGACGTGCACG
TTTGTCACTACCGCAGTGTCGATGCGCACATGGCGCGCATGATCGATGCT
GCGTGCAGCACATAA
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protein sequence of jgi.p|Trimin1|174789

>Trimin1|174789|e_gw1.117.5.1 ID=Trimin1|174789|e_gw1.117.5.1|Name=jgi.p|Trimin1|174789|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=355bp
MSQSRTWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTF
TTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAV
FQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYM
VKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAA
LATVLSDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCS
ALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFV
GGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDA
ACST*
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mRNA from alignment at Contig_117:462555..463619+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5149 ID=mRNA_5149|Name=jgi.p|Trimin1|174789|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1065bp|location=Sequence derived from alignment at Contig_117:462555..463619+ (Tribonema minus UTEX_B_3156 )
ATGAGCCAAAGTCGTACCTGGTTCAAGGAGCTGTTTGGGTTTGCCGAGGA AGGCAATCACAGCTACCACGACGTGCAATCCATGTTTGGAATTCACAGCA CGCAACTGACCAGCATTGCGAACGGTCGCGAGTCTGATGTTGGCACATTC ACTACGCCGACTCTGAAGGAACAGCGTCGTAAAGGACATCAAGCACTAGC ATCTGCATCTACGAAACGGCCAAGGCGACACGGCGTGCATGTTGATCACA CCACTGTCACTAATATCATGCACATGCACTATGAATACCCAGGTGCTGTT TTTCAAGCGGCGTCGCAGTTCAACTGCTTGGAGTTTCCTGACCCTCTCAC GACACCGGAGCAGGGCATCACACAATATGCTTTTGATAATACGCAAGGCC CGGCGTGCGCGTTGGCGTGTGCGGCGGGCACGGTGTTGAGAAACTATATG GTCAAAATGCCCGGCGGGGGGCGCGGGCAGACGGCGGCACGGCAGCTGAA CATGCTAGACGAGCTTGAAGAGGCTATTGACAACCGCGCGTGTAAATATT TTCTCGTGAAAAACGGTTACGTCACGTCTACAAGTAGTGACCTAGCTGCA CTAGCGACCGTTCTCTCTGACGACATGGACGCTCTTGTGAAGGTGGGGCT CCATGAAGCGGTCGGTGTCACCTTCAGCGGGCGTACCGCAGGCGGCCGAT ACATTCAACCTCACGGCTCACCAGCAAAAGTAACGCAGGTGTACTGTTCA GCATTGAGTATAGGCTACAGCGGCATCGCTGCCCGTGAGTGGGAACTCCT GGCGCGCGTGGTGCTTGACGCGATATACGAAGCCACACTGTGGGCAGCTG TCCTGAACGCGCAGCTGACTGGCGTGCGCCAGGTCTTTTTGACTTTCGTT GGAGGCGGCGTGTTCGCCAACCCCAAGCGCTGGATCGCTGAGGCTATTGG GCTCGCGGTACAGGTGCTTCACGCTGCAGGAGCGGATCTGGACGTGCACG TTTGTCACTACCGCAGTGTCGATGCGCACATGGCGCGCATGATCGATGCT GCGTGCAGCACATAA
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Coding sequence (CDS) from alignment at Contig_117:462555..463619+

>mRNA_5149 ID=mRNA_5149|Name=jgi.p|Trimin1|174789|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1065bp|location=Sequence derived from alignment at Contig_117:462555..463619+ (Tribonema minus UTEX_B_3156 )
ATGAGCCAAAGTCGTACCTGGTTCAAGGAGCTGTTTGGGTTTGCCGAGGA
AGGCAATCACAGCTACCACGACGTGCAATCCATGTTTGGAATTCACAGCA
CGCAACTGACCAGCATTGCGAACGGTCGCGAGTCTGATGTTGGCACATTC
ACTACGCCGACTCTGAAGGAACAGCGTCGTAAAGGACATCAAGCACTAGC
ATCTGCATCTACGAAACGGCCAAGGCGACACGGCGTGCATGTTGATCACA
CCACTGTCACTAATATCATGCACATGCACTATGAATACCCAGGTGCTGTT
TTTCAAGCGGCGTCGCAGTTCAACTGCTTGGAGTTTCCTGACCCTCTCAC
GACACCGGAGCAGGGCATCACACAATATGCTTTTGATAATACGCAAGGCC
CGGCGTGCGCGTTGGCGTGTGCGGCGGGCACGGTGTTGAGAAACTATATG
GTCAAAATGCCCGGCGGGGGGCGCGGGCAGACGGCGGCACGGCAGCTGAA
CATGCTAGACGAGCTTGAAGAGGCTATTGACAACCGCGCGTGTAAATATT
TTCTCGTGAAAAACGGTTACGTCACGTCTACAAGTAGTGACCTAGCTGCA
CTAGCGACCGTTCTCTCTGACGACATGGACGCTCTTGTGAAGGTGGGGCT
CCATGAAGCGGTCGGTGTCACCTTCAGCGGGCGTACCGCAGGCGGCCGAT
ACATTCAACCTCACGGCTCACCAGCAAAAGTAACGCAGGTGTACTGTTCA
GCATTGAGTATAGGCTACAGCGGCATCGCTGCCCGTGAGTGGGAACTCCT
GGCGCGCGTGGTGCTTGACGCGATATACGAAGCCACACTGTGGGCAGCTG
TCCTGAACGCGCAGCTGACTGGCGTGCGCCAGGTCTTTTTGACTTTCGTT
GGAGGCGGCGTGTTCGCCAACCCCAAGCGCTGGATCGCTGAGGCTATTGG
GCTCGCGGTACAGGTGCTTCACGCTGCAGGAGCGGATCTGGACGTGCACG
TTTGTCACTACCGCAGTGTCGATGCGCACATGGCGCGCATGATCGATGCT
GCGTGCAGCACATAA
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