|
Homology
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A836C824_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C824_9STRA) HSP 1 Score: 1144 bits (2958), Expect = 0.000e+0 Identity = 545/545 (100.00%), Postives = 545/545 (100.00%), Query Frame = 1
Query: 1 MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAATLNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGPPDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK 1635
MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAATLNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGPPDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK
Sbjct: 1 MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAATLNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGPPDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK 545
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A835YN73_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN73_9STRA) HSP 1 Score: 317 bits (813), Expect = 2.020e-96 Identity = 183/448 (40.85%), Postives = 242/448 (54.02%), Query Frame = 1
Query: 211 VFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYS-NYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNK-----------------------DAEYVTSLAATLN-------------LPAEPARR-----HPVPM------PNFCISEQ----CVKAGSYNCLTSYYPNLEDSLQLKAHITQSA-FNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVLAGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQSLGSVATMWFMVDGQ 1395
+F N W+DLPDGG AV R+L A+V QR F ++FTGISNTAGHDN+ Q+YP E +L PV AGV+ NGA+GN D LPYSYC+EAHAGAHPD+VSWEM MQI C +E +E WIR +ALPS+P+P++L + R C +RE + ++ + GRC G T + D M +YKD+GIH+L+L+ L++ TCG F+++ LYG K A Y+ L L+ L A R H VP P C + C ++GSY CLT+YYPN + S QL ++T + N +YLP EWQ++VNE I F F+N WPVDRKWVLAG AG LN F + AG P+++CRQ+ PQ T E AQ ++ M +DGQ
Sbjct: 1 LFHNAWYDLPDGGAAVKQRLLRAVVGQRNFTMAFTGISNTAGHDNLFAQSYPMVLERLLKPVLQLAGVELRVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMSMQIGNTPCTRTAELVETWIRTALALPSRPVPLLLNCQADRGRCARDREAPPTLSHTMEKAVGRCVGAERTRGTLQHDLMSWYKDYGIHSLNLETLMAAHTCGYPAFEKKRLYGGKVGTPRTKSWHPGPGAHRLMAEVLAANYLGLLRGALSELDAAAPGVTLQELQARERRLRQCAVHLVPQLWQSHAP--CCHRRFVLLCARSGSYRCLTTYYPNQDASTQLDRYVTDNTTLNRKPHFKYLPTNTSEWQVIVNEPMRGITGFQFDNPQWPVDRKWVLAGAASAGPLNFKFEVTELP------AGRMAPVVVCRQVPPQQTPSEIHAQPPYTLDNMVLSLDGQ 440
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A835YRS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS9_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.140e-75 Identity = 145/358 (40.50%), Postives = 199/358 (55.59%), Query Frame = 1
Query: 172 SSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNK-------------------------------DAEYVTSLAATLNLPAEPARRHP-VPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHITQSAFNATERTQYLPDVPE----EWQIVVNERA 1137
S K KYG + +F + W+DLPDGG+AV R+L AIV+QR F ++FTGISNTAGHDN ++YP E + PV AGV+F NGA+GN D LPYSYC+EAHAGAHPD+VSWEMGM++ C + +E WIR V++LPS+P+P++L + R C ++ F ++ GRC G ++ +Y+++G+H L+L+ LL+ CG+ LF +E LYG K D Y LA L L A P +P ++C E C AG++ CLTSYYPN ED QL H+ S F+ T + Q + P+ EW I + ERA
Sbjct: 3 SLKKKYGWQMKP-LFKDAWYDLPDGGRAVKQRLLHAIVHQRNFTMAFTGISNTAGHDNRITESYPMVLEQLFKPVLQLAGVNFHVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMGMEVGNRSCRQTAMAVEAWIRAVLSLPSRPVPLLLNCQADRGGCARGSNAPSAHRVFERVVGRCEGKEHSEYTEEHQLTQWYREYGLHGLNLEFLLAKHACGNPLFAKERLYGGKMGTPRTKSWHPGPPGHLLMAEVLMANYIGLLDVAYREELAKALGLQPYGASGPPRLPEASYCFQEHCTNAGAFTCLTSYYPNWEDHTQLTPHVVDSRFDPTPKFQVGLEKPDAAAAEW-IKMTERA 358
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A836CGX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX8_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.410e-34 Identity = 58/91 (63.74%), Postives = 76/91 (83.52%), Query Frame = 1
Query: 235 LPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDI 507
+PD G A++DRMLGAIVYQR+F V+FTG S TAGHDN++ Q+YP FE+I+AP+F +GV+FTA+N A+GNNDI+PY +C+EAH G PDI
Sbjct: 1 MPDDGAAIIDRMLGAIVYQRSFRVAFTGTSVTAGHDNLESQSYPMQFESIMAPIFEHSGVNFTATNSAMGNNDIVPYLWCLEAHVGIDPDI 91
BLAST of jgi.p|Trimin1|339673 vs. uniprot
Match: A0A836CG01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG01_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.810e-8 Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRESIVCVALSSK 180
M NRR ADDGK + LVR CR+ K G TRMR+CHDR F SA ATD R+S+V VA SS+
Sbjct: 1 MRNRRRADDGKCTFLVRRCRAXXXKWG--TRMRQCHDRDFTSAVATDRRDSVVYVAPSSQ 58
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | Trimin1|339673|MIX48436_57_40 |
Max annot lvl | 2880.D7FPX3|- |
EggNOG OGs | 2EABQ@1|root,2SGK3@2759|Eukaryota |
Evalue | 1.49e-38 |
Seed ortholog | 2880.D7FPX3 |
Hectar predicted targeting category | other localisation |
TranscriptId | 339995 |
Track | FilteredModels1 |
ProteinId | 339673 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14894 ID=mRNA_14894|Name=jgi.p|Trimin1|339673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2412bp|location=Sequence derived from alignment at Contig_98:151239..162002+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGAGCAACAGACGTCTTGCAGACGACGGAAAGCGCAGCATTCTTGTGCG ACTCTGTCGTTCAGACGACAGCAAGTGCGGCTGCCGCACTCGTATGCGAC GGTGTCACGACAGAGTTTTCATTAGCGCTGCCGCGACGGACTGTCGCGAG TCCATCGTCTGCGTTGCGCTGTCATCTAAGGACAAGTATGGCGAGAAGTA CAGCGACACGGTGTTCGCCAACGGCTGGCACGACCTGCCGGATGGGGGTC AGGCCGTCATGGACCGCATGCTGGGCGCGATTGTGTATCAGCGCACGTTC CACGTGTCCTTCACGGGCATCAGCAACACGGCCGGGCACGACAACATGAA AGAGCAGGCGTACCCCTGGCACTTTGAGACGATCCTCGCACCCGTCTTTG CGCGCGCCGGCGTTGACTTCACCGCCTCCAACGGCGCCATCGGCAACAAC GACATCCTGCCGTACAGCTACTGCATGGAGGCGCACGCGGGCGCGCACCC CGACATTGTCAGCTGGGAGATGGGCATGCAGATTGAGGGCGTCGAGTGCT TCCCCAAGAGCGAGTACCTGGAGTACTGGATCCGCAATGTCATAGCGCTG CCGAGTCAGCCCATCCCCGTTGTCCTGGAGGCAGTGTCGAAGCGGCGGTG GTGCCCGGGCAACAGGGAGCTGAGCTACAGCAACTACGACTTCAACCAGA TGTTTGGGCGGTGTTGGGGCGACCGCCCGACGGACGAGCAGCGGCGCAAG GACCAGATGGACTACTACAAGGACTTTGGGATACACGCGCTGCACCTGGA TGACCTCCTGTCCCACACCACTTGCGGCGACGACCTTTTTGACGAAGAGC ACCTCTATGGTAACAAGGACGCCGAATACGTGACATCATTGGCAGCAACG CTCAACCTGCCAGCAGAGCCCGCCAGGCGGCATCCAGTACCCATGCCCAA CTTCTGCATCTCGGAGCAGTGTGTCAAAGCCGGCTCCTACAACTGCCTGA CATCGTACTATCCCAACCTGGAGGACAGCCTGCAGCTGAAGGCCCACATC ACGCAGTCTGCATTCAACGCGACAGAGCGCACGCAGTACCTCCCCGACGT CCCTGAGGAGTGGCAGATCGTCGTCAACGAGCGCGCGACGGACATCGGCG AGTTCCACTTCAACAACGCGTCGTGGCCCGTGGACCGCAAGTGGGTGCTC GCGGGCGACAAGCGCGCGGGCGCGCTGAACATAGCCTTCACGACGCAGGG CGTGCACGAGAACGCGCTCGGGCACGCGGGCGCCACGGAGCCCATCATGC TGTGTCGGCAGCTGTCGCCGCAGCACACGCACGAGGAGGATGCTGCGCAG TCGCTCGGCAGCGTCGCCACCATGTGGTTCATGGTCGACGGCCAGCCATC GCCCCCCTGCACTGCTGCCGCGTGTCTCATCTTTGAACTGCTGCCACGTG TCTCGTCGCGCCTTCGCCGAACGCAGCCGTCCGGCGCGTCGCGCGGCCCG CCGGACCGCGGCATCCACAGCGTGTGCTGGACGCTGGACGTGCGCGTCGG CAACGGCGACCACCTGCTCACCATTGTGCCGCTCAAGGAGGGGCCGGAGA ACCTGGTCCGCATCTCGCACGTCATCGTGCCCAAGTAGCCGCGCGCGCGC GCGCCGCCTGCGCATGTCTGCGCGCTGATCGCGGACGCTGCTCGCGGTCT GCGAGCCGTCACCGCTGATATGGCGTTGCGTACGGCTGGGCTCAGCCTGG ACGCGGCAGTAGAAGTAGCCGCGAGCGTGCCTCGCCTGCAGATGCCTGCG CGCTGGCTGCGGCGCGCGGCGCTTGCGGTCTGCGAGCTGTCGCGATTGGT ATAAACCAGTGGCAGTGTGGCGTCACGTACGGCTGGGCTCAGCCTGGACG TGGCAGTAGAAGCTGGAAGCAGAACTGTATGCGTGTGCCGGGAGAGGGCA ATGGGTCCCAAAGTGCATACGCGCAGCGCTGAGCGTTGTGACGGTGTGTC GAAGTGCGTGGTGTGGGCGGCGCCTGCAGTGCAATGCCGTTCAGGTAGAG CGTACGCAGCACGGCTACTGCTGCGCACGTCGCACTGTGCGTTGCGCAGC AGCGGTGTCTCTGCGCAACGCATCATCAAAGCGTCTTTGTGTTTACATCC CATCCTGAATGTTTGCGACTGCAGCGGGGCGTACGTGCCATGCGTGTGAG TCGGCTTCACTTCCTCCACTGACCGACGAAAGTGCTCTGGATTCACACCT CCCAACAGCTATGGCTGGCTTGCAGGCAGAACCAGGCCAGCCTGGACCAC AAATTCTGATTGCGTGCGTGCCTCTGTGCTTGATAACTGCACAAGATGCC TGGTGGTTACAGTCAGCACAGATCCCTCTATTAGTTGGTAATACAGGTTT GAGTTCATCATG back to topprotein sequence of jgi.p|Trimin1|339673 >Trimin1|339673|MIX48436_57_40 ID=Trimin1|339673|MIX48436_57_40|Name=jgi.p|Trimin1|339673|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=546bp
MSNRRLADDGKRSILVRLCRSDDSKCGCRTRMRRCHDRVFISAAATDCRE SIVCVALSSKDKYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTF HVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNN DILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIAL PSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRK DQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEYVTSLAAT LNLPAEPARRHPVPMPNFCISEQCVKAGSYNCLTSYYPNLEDSLQLKAHI TQSAFNATERTQYLPDVPEEWQIVVNERATDIGEFHFNNASWPVDRKWVL AGDKRAGALNIAFTTQGVHENALGHAGATEPIMLCRQLSPQHTHEEDAAQ SLGSVATMWFMVDGQPSPPCTAAACLIFELLPRVSSRLRRTQPSGASRGP PDRGIHSVCWTLDVRVGNGDHLLTIVPLKEGPENLVRISHVIVPK* back to topmRNA from alignment at Contig_98:151239..162002+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_14894 ID=mRNA_14894|Name=jgi.p|Trimin1|339673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10764bp|location=Sequence derived from alignment at Contig_98:151239..162002+ (Tribonema minus UTEX_B_3156 ) ATGAGCAACAGACGTCTTGCAGACGACGGAAAGCGCAGCATTCTTGTGCG
ACTCTGTCGTTCAGACGACAGCAAGTGCGGCTGCCGCACTCGTATGCGAC
GGTGTCACGACAGAGTTTTCATTAGCGCTGCCGCGACGGACTGTCGCGAG
TCCATCGTCTGCGTTGCGCTGTCATCTAAGGTGTGAAAACCACAACACTA
CTGTCTAAGGTGTGAGCATGCGCGTCAGTGCGCGTGCGTTGCATGAAACG
CCGCGCATGTATAACCTAAACGTCAGCGATGTGTGCCATGGGCTTGCCAG
TGAAGTTCTCATGCGCGCAGCATGCCTGCCTCCCACCGCAGGACAAGTAT
GGCGAGAAGTACAGCGACACGGTGTTCGCCAACGGCTGGCACGACCTGCC
GGATGGGGGTCAGGCCGTCATGGACCGCATGCTGGGCGCGATTGTGTATC
AGCGCACGTTCCACGTGTCCTTCACGGGCATCAGCAACACGGCCGGGCAC
GACAACATGGTGAGCAACTTGAATCGAATTAAGTTCGGCCGCTGCGCAGC
CGATGATGGTCACCTTGCTTAATAATAAAATCCCAAATATGACGTATGCG
AGCCGCCAGTTCAAAGTTTGCGCTACATTGAAACTACAGACTTGATGCGA
GAAATGGCTAGCAGCGTTCGTGGCAGATGTTTCAGTGTATGTGGCATGCC
ATGTGCACGAAGGCATACAGCACAGAAGCCGTCAGGAGGTCACCTAACCT
CGAAGTTCATGTACCAGTGCTCAACCACCGTAGGTCGCCATTATAAATGC
ATGTACTATCATAATGACAACAGAGCTCAGGGAGATGTCGAGGTTCCGGA
GCCTCTGTTGACCAATATATACAAACACGAATGCAGAGCAAACACAGTCC
TTTTGCCGCCAGGTACGTCACGTCCTCGCCCACCTGATAATCGCCACGTC
ACATCGGTGATCCCGAAAGGACCATGCTGGCCTGGTACAAGTCGCCAAGG
ACACGCTGGCAGTGCGCTCTGCCACAGATCCCTCAAAGCACACACACATG
TTGCCGGGTTGAGCGTGGCCACTCTTGCACTGGAGTGCGCTCACAGTGGC
CCCCTGCCCCCCCCCCCCTCCCCCTTGTGTTCGGCGCGCTCCGCAACGGT
GCTTCGGCGTCGCAGGAGGAGAAGGCCTACTGCAGCAAGAGCAGGCCTGA
CCCTAGCGGTTTGAGTTGACTTTTGCACCCGTCTTTGCGAGAGCCGGCAC
CTAATGCACATAAGCACATTACTTACCTACCATTGCCCTTCGCCGTCACG
TCACTACCGCAGAAAGAGCAGGCGTGCTTGACCGCATGCAAAAATTAGCA
CATCACTGACCTACCACTGCTGTTCACCGTCGCTACATACCGCAGAAAGA
GCAGGCGTACCCCTGGCACTTTGAGACGATCCTCGCACCCGTCTTTGCGC
GCGCCGGCGTTGACTTCACCGCCTCCAACGGCGCCATCGGCAACAACGAC
ATCCTGCCGTACAGCTACTGCATGGAGGCGCACGCGGGCGCGCACCCCGA
CATTGTCAGCTGGGAGGTGCGTAATCAAGCGCGTGCTGTGCATACATAGA
AGTACATAGCCTTATCAAAAAGGCCACTGTATGATTCAATAGTCTCATGA
GGCCTGTGCCTCATGAGTGCGTGTCTCATGAGGCGTGCGCGCGCCACATC
GCGGCTGCAGCGGTGTGTGCGCACCGCCAGATTTTAATCGCAGTGACATG
TGCGCGCACTGCCAGATTGTAGTCGCTGTGGCGTGTGCGCGCACTGCCAA
ATTGTGACCATGTGTGCGCACTGCCAGAGTGTAACCGCAGTGACGTGTGC
ACGCACTGCCAGATTGTACGCGCGGTGACGCGTGCGCCCCGCCAGGCTGC
ACCTGCAGTGCTGTGTGAGCGCGCTGTATTTTGATTGCGTGGTGTGTGCC
TTAACCTTGCCAGGGCCCTTTTGATGGTCAATTTAGACCCCTAAAGCCCG
GGGACATGCTGCCTGTGCCAAGGTGGCTGCGTTGGTGGCAGCACCGCCGA
CCTACACTGATGAAGAACACAATCATGTTGCTCACGCTCTGGCACCACTG
CTTCATGCACCAGCTTGCAGCATCATTGGCAGAATGTATACCGACATCTG
TCTGCACACGCAAGTTGTGGATGTTTCCAAGCGCAGTGCGGCGCAAACTT
CACGTGCTAACCTCAACATTGTAGCCCCCCCGCTTTTCCTGTTGTGCAGA
TGGGCATGCAGATAGAGGGCGTCGAATGCTTCCCCAAAAGCGAGTACCTG
GAGTACTGGATTCGCAACGTCATAGCGCTGCCCAGTCTGTTTCCTAGCGC
AGTGTGGCGAAAACTTCACATGTGAACCTCAACGTTGTAACGCATCCCCC
CCCTTCCCCCCCTTCCTTGCCATGCGGATGGGCATGCAGATTGAGGGCGT
CGGATGCTTCCCCAAGAGCAAGTACCTGGAGTACTGGATACGAAACGTGA
TAGCTTCACATGTGAACCTCAACATTGAAGCACCTCCCCCTTTCTACCCC
CACCCCCCCCACCCCCGTTCCTTGTGTCGTGCAGATGGGCATGCAGATTG
AGGGCGTCGAGTGCTTCCCCAAGAGCGAGTACCTGGAGTACTGGATCCGC
AATGTCATAGCGCTGCCGAGTCAGCCCATCCCCGTTGTCCTGGAGGCAGT
GTCGAAGCGGCGGTGGTGCCCGGGCAACAGGGAGCTGAGCTACAGCAACT
ACGACTTCAACCAGATGTTTGGGCGGTGTTGGGGCGACCGCCCGACGGAC
GAGCAGCGGCGCAAGGACCAGATGGTGAGCGGAAGTGAGCGCGTGCGCTG
CGAACGCATGGACGCACTGCAACAGTGTGGGGAAAGGGCCTAACCTGTTT
GAGTGTGCTGTCCATGCTGGCGCACATCGCAGAAACTGCGATGCGTAGTG
GTTTCGGCAAGTGGGCCGTACACAACTCCTCTGCGGGAGTACGTTGTGAT
ATGAGTGCTTGTGAGGATGGCTGATGCAGGCAATGTTGTCGCCTCCGCAT
TGATCACTCGTGCACATGACTGTGGCATGCTGGCGTCATGGCAAGCGGCT
TGACGTTGGTAATGAAATGTAAGTCCATGAGCTACAAAATGGACCCTACT
AGTAGGCGCCACCTCATGCAAGCCCTTGCAGCCACTGCTGACAGTGGCAT
GGTATGAATAGTGCACAGTTGTGCTTGCGCTAAAGTTCATGGCTTGCAGC
GACCAAACTCCTCATCCGTGGAGACACTCTACGCACTTCACTCTACGCAC
TCTCTGGTACAGAGGTGCAGTGGTACTGGGGGATCTGCTGGGAAGCAGGG
GCGAGCCACGGCAGCTCTAGCCAGGTGTACACATCGTTCAGTGACGCAAG
GCATCAGGCTGCGCCAATGCCATCATTGAGGCAGGCATTTAATCGGAGTA
TTTGCTTGTTCTACTGCAACTTGCGAGCGCACGCTCTGTGACTCGTCATG
CATTCACTTATGCATTCGCTTGTGAGCACGTTTATCACCTTTGTGCGCAC
GAATGCCCACCTCACGACTCACAATGTCGTCACTGCTGCGCTATGCGGCA
GGACTACTACAAGGACTTTGGGATACACGCGCTGCACCTGGATGACCTCC
TGTCCCACACCACTTGCGGCGACGACCTTTTTGACGAAGAGCACCTCTAT
GGTAACAAGGTGAACTGGCCTGCAACACTTTGTGTCCTGTCTCACAGGCT
GTGTGATCTTGTAATTTGATGGGCAATGTTGCCAGCTAAACGAGCAGTCC
ATGTGGTGGCGTTGCGGAACAGCAGCCACTGCATTGCTGCCGTCAACTCC
GAACGCACTTATTAACCATGATCCGCCAACAGTGCTGCCGGCTGAGCACG
CACCTCATCTGCATACTCAAACTCTCAAATCAGATGTTTGAGATAGCAAT
TCCGCATGGCTGCAGCCAAAGCTTTGATCATAAGAGGTTGCCTTAGGGCC
TTCATATTTTGCCAAGGCCCGCTTTCAGACCATGACGATGCTGAGATGCG
CCGGTCACATGTGCTCAACGCCTTGGCCCTCATGATCCTCACTACCCTTC
GGCTGTGGTCCCTGACAGGGCACACCTCAGCACATGTTGAAGTTGGGTCC
TGCTGAGCACTGATGTGCCTGTACATGCAGCTTTTATGTTGCGGTTCTCA
AATGATCGCTCCTGGCAACACGCGCACTGACCGCGAGTCTTGTGTGTGCT
GGGCTCCGTTGATTGGCCATCTCTGGCACGCTCTCAGCCCCAAGGTGGCG
CCATGCGAAGGCTCCGCATGCATACATGCAGTACCGACTGCCATCAATAG
AGTAGTGCCACGCACACACTCAGGCGTGCCATCACGATGCTGCCATCACT
TCCGCGACGAACAACCTGTGGTAAGTGCTAATATGCTCACTTCTATCCCC
AAAAACTTGCAGCATACACGCCTGACCACCTCGTTACTGCTGGCGGGCCC
TATTTCTTGGCTGCAGCTCTGCACCAGCTGTTACCCACATTATGTGCTCT
CGGTGTCCGGACGGGGCGCTAGTGCAAAGGGCGGAATTCAACTTGCTCCT
GTGATGCAGTCAATTTATATGTGCTGTTGATCTGCATCATCATATGGCCT
AGGCCCAATGCGGCGACACTTCAATCAGTCTTGTAGGCCTATTCTGCCAT
CTAAACCCCTAAAGTTTAACTCCTTTGCTCCCGTGACAAAGGTCGGATCG
CCCTCCATGCGATCGTGGCACCCCGGCCCGGGAGGTCACCGGCTGATGGC
GGAGACGCTGGCGGCCAACTACATGCACCTGCTGCTGACAGCGCTCAGGC
GGTTGAGCGCTGCAGCACCGGGCCTGAAGAAACACAAGCTGCAGGCAAGG
CGAACACCCTACCTAGACTTGGCGTCAGTTACTGTGCAGGGGTGGTTTTG
GTTGTTCGTCTAGTGCAGCTGGTTCTGCTCTTGGCAGTGTGTCGGATTGA
TTCATGTGTGTTGAGTAATGTCGGCGCTCAAAACTCTGGCTCTGCGACGC
TGATGAATGAATTAATGTGTGTTGGTGATGGATGCCACGTTGCCGCTCAC
ATACAGCTGGCGCAGTCCGATCACCACAGCTTCTCTGCAACTAGTATGCG
TCTACAGCAATCATGTTTGATTTCTCTCGACAAAAACTTGATGTGGCTTT
GATAATAGCAGCCAGACCTCTTGCTACTTCGAGACCGTGTTGCTCGTGAT
TAGACTGCGTGGTGCCACTGGTTTCCCGTATGTGCAAGACTTATGCCTTA
TCTCATTGCCTCCATGTCTTTCAGGACGCCGAATACGTGACATCATTGGC
AGCAACGCTCAACCTGCCAGCAGAGCCCGCCAGGCGGCATCCAGTACCCA
TGCCCAACTTCTGCATCTCGGAGCAGTGTGTCAAAGCCGGTGCGTACATG
TGAACCTCACGGTACTGATGCGCACTGCTCCTCTACGCTATGTACTTCTA
TATGTAGAAGTATGTATGTATTTGACATTATTTTTGAGTGCGATGCCATC
GTGCGTGCACCTTTTTCGCTGGCACATGCGCAAGCGGCGGCGTGCGCATC
CTGTTTGCACCCGTGACATGCCAACATGACGCAGGCCTGCATGCGAGTGC
AGAGAGAGCGCTGACATGCAAATGTAGGCAGCGCTGATTGCGCAGCTGTC
TGCGACTTCCATGCGGGGGTCTATGCGCTCACCATATGCTTGGAGAACTT
GATACTGCCTTGCCCTAGTCGTCGCTCTCGGAGGCATCACGCAGTGTTTG
TCTGGTGTTTGCGTCTGCGCTCATGACGAGTGCAGCAAGGTTCCTTACTG
GCCATGTTGAAGTAGTGTTGTGGCTCAGCATTATGCTCTGTGGCGACGTA
TATAATGACCTCCACTGCGTATTTGTACAGTCCTGTTTGCACTCGAGACG
CTCAAGCCTGCATTCCTCGGACAAGCACACTTGATCAATCCCATGACTGA
CCTTGAATCCCCGCCCAACCATCAGCAAATGCAACTGCGGCCAGGCAGAT
GAGTTGTGTTACAAACAAAGCAACCGCGCAGAGACAGCCCGGTGGCACGT
ACGGTCGACTCATACATGTACTGTCATGGAGGTCATGGCAAGCTCACAAG
TCATCACTGCTTGCACATGTTGCAGTCCTGATTTCGATGGTTTGTGGTTG
CGTAGCTAACATTATGACGGTGGACACAAAGTCTGCAGGCCACTGCTGTA
TTCCACCAACATGCATCGATATGATGTACCACGGCTCTGTGTGCATGTTC
ACGATCGACCAACACTATCACCAGCTGCCCCTCATGCACATTCTGTACGG
CTTAGGCCATATCTCTCACTGAGCACCGATTACACGCACCACTGCTGCCT
GCTCTGCCCTCAGGCTCCTACAACTGCCTGACATCGTACTATCCCAACCT
GGAGGACAGCCTGCAGCTGAAGGCCCACATCACGCAGTCTGCATTCAACG
CGACAGAGCGCACGCAGGTGCGCGGCCACTTGACTGGCGCCTGAGATGCA
TGTCGCTGTGTGCAAATGTGTGGCGAGAATCCTGCTGCTGGCTGCTTGCA
TATTGGTGACAGGATGAACTCGAAAGTATTGAGGAGCATTAGTTGTTATT
GAAGGCCCAGGCGAGGCTGGATGTTTGGTGTGTGCCTACAGTCATGCCAT
ATTTGCAGTCACGCCATGTGCACACGATTGATCTGAGCTATCAAAGTACT
TCAAGAATTAAAACATCAACAGGAGCAGATGTCATAACTCAGTCAAAGGC
TTTGTCGTGACGGGCTGATCGTTGATGAGCCTTTGAGAGTCTGCTGCCGT
CACTGACAGGAACAACTCTGCTCTGGGCAAAAAAACATAACATGTAAACA
GAACTGATAGTTACTCGTGAGAGCATGCAGCCGGCGAGCACGAGGTCCAA
TGTAGTAGTGCATGTTGCAAGTTTGCAGCTTGGCTGATGGACTCCTGCAA
GTAACATCTATCTGTACACAACTGCTTCAACAACTGCTGATTGGCTGCAG
AATGCAAGGCTACACACCTTGCGGCCTACACCAACAGCTGCTCCTTGGCC
CACAATTCACTCAGCACCACCTGAAACTCATTCAGATACGCCCCCCCCCC
TTCCACAAGTTAACCAACCCCCATCTGCCTCAAATGCCAACCCCTGTGTG
CCGTCGCGCAGTACCTCCCTACTGTGAACACCCCTTTGACATGTATGTCA
GGCCGCAACCTTCGCATTCCACAGTTTAACCAACCACCATCTGCCTCAAA
TGCCAACGCCCCCGTGCGGCGTGCAGTACCTGCCTGACGTCCCCGAGGAG
TGGCAGATCTCGTCCAAGAGCGCTGCGGACTGCAGGCCATACACGCCGCA
GTCTGATCAACTGCTGCTCCCTGGCCTCCACAATGTACTCATTGCCACCT
ACTGTACAACACTAATCCTTATAGTCCACACCTCCCCCCTTCCACGAGTT
AACCAGCCCCCACCTCAACTGCCACCCCCCCCCCCCCCCCTCCCCCCCCC
CGTGCGCCGCCACTGCAGTACCTCCCCGACGTCCCTGAGGAGTGGCAGAT
CGTCGTCAACGAGCGCGCGACGGACATCGGCGAGTTCCACTTCAACAACG
CGTCGTGGCCCGTGGACCGCAAGTGGGTGCTCGCGGGCGACAAGCGCGCG
GGCGCGCTGAACATAGCCTTCACGACGCAGGGCGTGCACGAGAACGCGCT
CGGGCACGCGGGCGCCACGGAGCCCATCATGCTGTGTCGGCAGCTGTCGC
CGCAGCACACGCACGAGGAGGATGCTGCGCAGTCGCTCGGCAGCGTCGCC
ACCATGTGGTTCATGGTCGACGGCCAGGTGCGCGTGCACGGGCTCTTTTA
CCGGTGTTTTGCAGTGCCTGGCTTCAGTGTTTTGCAGTGTCTGGCTTCAC
CTGAGAGCTGAAAAGCTTGTGCACTTGGCGGGGTAGCCGTCCCCATCTGA
AGTGCGCGCGGGCGGTGGCGGCGGCGGGATGAGCGCTGCGGCGCGCCGCG
CGTCGACCCCTGAACTTCAAATTTGAAGTTGAACTTGGCGGTTGAAGTAT
AGTTGGTAGCTAGCTAATATGTGGTTCATGGTCGACGGCAAGGTGCGGTG
CGTCTGACTTTGTTATCAGTGTTTTGCAGTGTCTGGCTTCACCAGTGAGG
CGCTGAAAAGCTTGCGCACACTTGGCAGGGTAGCCGTCCCCTGCTGGGGT
GCCAGGATACCGCAAGAGCGCGCGGGCTGTGGCGGGATGAGCGCTGTGGT
GCGCCGCGCGTCAACCCCTGAACTTCGATCTTGGAGTTGAACTTTGCAGT
TGAGGTACAGTTGGTAGACGGCTGCTGCGCAGTCATGCAGTCATGACTGC
CACCGCCGCTCACGTGAAGATGGTCGGTGTGCAGCTCTCGCTGGACAGCA
TCGGCTATGTGTGCTTCATTGGCGAGTTGCACCGCCTTGTGGAGACGAAT
GTCAGAAAGAAGGCATAGGGGCTCACAACCTGCCTGTGGGCACGGTGTTA
ATAACTCTATTGTGCAGCTCGTGTTCGCAGCACAATGAGCTTCATGTAAG
CTGGCACTGATGCCTCAGTGTATGTGTGTGGCAGGATGAGGGCCAGGAGC
TTTTGGTGGAATGGCTTGACAGCCAGTGCAACTTGCCAGACGCATCTAGC
GTTTTGTCGCAGATCGAAGTGCGACAACGGACTGCAGTTTTCATGGTACA
TTGGCGCTGATGCGCGTGCAGCTGCTGCAGTGCTCAACGCAGCGTGCCGA
AATTAGCGGACTCATACATGTTGGTGTGTGTTGCTTTGTCAAGTATGCAT
TCATTGAGGTCACAAGAGCCGACTACCTTGGCTGCAAAGGCTCCAGTGAC
TGGCATGAGGGCTGACAGAGTTATCTTGCGTTATACTTCAATTGCAGGGT
TCTGGTGCGCGCTGAGACTCCGCATCACAACAAGTTCGGCACAATCAACT
GGCACGTGTGTATACCGAGATGCGCCGGAATCATTGCGAGCTCGCACTTT
GTCAAGGGCCGCCATTTCATCAAGTTTGTCCCATCAAACACCAGCAGCTT
CTGTGATGTCAGGGCATGTGATGCTTCCAACGGCCCTTCACCCCCGCCCC
CCCCACCCCCCGCCCCCCCCCGCGCGTGCGCGCCCTGTATGCCGTCCGTC
TTCCCTGTGCGTTGTCAACACCACATCTAGGTCCAATGTCCCCCCTCCGT
ACTGCTGCCGCACGTGTCTCGCCGCACCTTCGCCCCGCGCAGCCATCGGG
CACATGGCACGGGCCTGTTTGCTGCCCGTCCTCCCCTGTGCGTCGCGAAC
ACCACCTCTACATAGGTCTGATGCATGCTGCTGCCATGTGTCTCTTTGTA
CTGCTGCCATGTGTCTCGCCGCACCTTCGCCCCACACAGCCGTCGGGCGC
GACGCGCGACCCTGTTTGCCGCCCGTTTTCCCCGTGTGCGTTGTCAACAC
CACATCTACTTAGGTCTGATGCACTGTGCTGCGATGTGTCTCTCCGTACC
GCTGCCACGCATGTGTTGCCGCACTTTCGCCTCGCGCAGCCATCCGGCGC
GATGCGCGGCCCTGCTTGCCGCCCGTTTTCCCCCTGTGCACGTCGCCAAC
ACCACATCTACTTAGGTCTGAAGCCCCCCCCCTGCGCTGCTGCCATGTGT
CTCTTTGTGCTGCTGCCGCGTGTCTCGCCAACCTTCGCCCCGCGCAGCCA
TCGCCCCCCTGCACTGCTGCCGCGTGTCTCATCTTTGAACTGCTGCCACG
TGTCTCGTCGCGCCTTCGCCGAACGCAGCCGTCCGGCGCGTCGCGCGGCC
CGCCGGACCGCGGCATCCACAGCGTGTGCTGGACGCTGGACGTGCGCGTC
GGCAACGGCGACCACCTGCTCACCATTGTGCCGCTCAAGGAGGGGCCGGA
GAACCTGGTCCGCATCTCGCACGTCATCGTGCCCAAGTAGCCGCGCGCGC
GCGCGCCGCCTGCGCATGTCTGCGCGCTGATCGCGGACGCTGCTCGCGGT
CTGCGAGCCGTCACCGCTGATATGGCGTTGCGTACGGCTGGGCTCAGCCT
GGACGCGGCAGTAGAAGTAGCCGCGAGCGTGCCTCGCCTGCAGATGCCTG
CGCGCTGGCTGCGGCGCGCGGCGCTTGCGGTCTGCGAGCTGTCGCGATTG
GTATAAACCAGTGGCAGTGTGGCGTCACGTACGGCTGGGCTCAGCCTGGA
CGTGGCAGTAGAAGCTGGAAGCAGAACTGTATGCGTGTGCCGGGAGAGGG
CAATGGGTCCCAAAGTGCATACGCGCAGCGCTGAGCGTTGTGACGGTGTG
TCGAAGTGCGTGGTGTGGGCGGCGCCTGCAGTGCAATGCCGTTCAGGTAG
AGCGTACGCAGCACGGCTACTGCTGCGCACGTCGCACTGTGCGTTGCGCA
GCAGCGGTGTCTCTGCGCAACGCATCATCAAAGCGTCTTTGTGTTTACAT
CCCATCCTGAATGTTTGCGACTGCAGCGGGGCGTACGTGCCATGCGTGTG
AGTCGGCTTCACTTCCTCCACTGACCGACGAAAGTGCTCTGGATTCACAC
CTCCCAACAGCTATGGCTGGCTTGCAGGCAGAACCAGGCCAGCCTGGACC
ACAAATTCTGATTGCGTGCGTGCCTCTGTGCTTGATAACTGCACAAGATG
CCTGGTGGTTACAGTCAGCACAGATCCCTCTATTAGTTGGTAATACAGGT
TTGAGTTCATCATG back to topCoding sequence (CDS) from alignment at Contig_98:151239..162002+ >mRNA_14894 ID=mRNA_14894|Name=jgi.p|Trimin1|339673|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1638bp|location=Sequence derived from alignment at Contig_98:151239..162002+ (Tribonema minus UTEX_B_3156 ) ATGAGCAACAGACGTCTTGCAGACGACGGAAAGCGCAGCATTCTTGTGCG ACTCTGTCGTTCAGACGACAGCAAGTGCGGCTGCCGCACTCGTATGCGAC GGTGTCACGACAGAGTTTTCATTAGCGCTGCCGCGACGGACTGTCGCGAG TCCATCGTCTGCGTTGCGCTGTCATCTAAGGACAAGTATGGCGAGAAGTA CAGCGACACGGTGTTCGCCAACGGCTGGCACGACCTGCCGGATGGGGGTC AGGCCGTCATGGACCGCATGCTGGGCGCGATTGTGTATCAGCGCACGTTC CACGTGTCCTTCACGGGCATCAGCAACACGGCCGGGCACGACAACATGAA AGAGCAGGCGTACCCCTGGCACTTTGAGACGATCCTCGCACCCGTCTTTG CGCGCGCCGGCGTTGACTTCACCGCCTCCAACGGCGCCATCGGCAACAAC GACATCCTGCCGTACAGCTACTGCATGGAGGCGCACGCGGGCGCGCACCC CGACATTGTCAGCTGGGAGATGGGCATGCAGATTGAGGGCGTCGAGTGCT TCCCCAAGAGCGAGTACCTGGAGTACTGGATCCGCAATGTCATAGCGCTG CCGAGTCAGCCCATCCCCGTTGTCCTGGAGGCAGTGTCGAAGCGGCGGTG GTGCCCGGGCAACAGGGAGCTGAGCTACAGCAACTACGACTTCAACCAGA TGTTTGGGCGGTGTTGGGGCGACCGCCCGACGGACGAGCAGCGGCGCAAG GACCAGATGGACTACTACAAGGACTTTGGGATACACGCGCTGCACCTGGA TGACCTCCTGTCCCACACCACTTGCGGCGACGACCTTTTTGACGAAGAGC ACCTCTATGGTAACAAGGACGCCGAATACGTGACATCATTGGCAGCAACG CTCAACCTGCCAGCAGAGCCCGCCAGGCGGCATCCAGTACCCATGCCCAA CTTCTGCATCTCGGAGCAGTGTGTCAAAGCCGGCTCCTACAACTGCCTGA CATCGTACTATCCCAACCTGGAGGACAGCCTGCAGCTGAAGGCCCACATC ACGCAGTCTGCATTCAACGCGACAGAGCGCACGCAGTACCTCCCCGACGT CCCTGAGGAGTGGCAGATCGTCGTCAACGAGCGCGCGACGGACATCGGCG AGTTCCACTTCAACAACGCGTCGTGGCCCGTGGACCGCAAGTGGGTGCTC GCGGGCGACAAGCGCGCGGGCGCGCTGAACATAGCCTTCACGACGCAGGG CGTGCACGAGAACGCGCTCGGGCACGCGGGCGCCACGGAGCCCATCATGC TGTGTCGGCAGCTGTCGCCGCAGCACACGCACGAGGAGGATGCTGCGCAG TCGCTCGGCAGCGTCGCCACCATGTGGTTCATGGTCGACGGCCAGCCATC GCCCCCCTGCACTGCTGCCGCGTGTCTCATCTTTGAACTGCTGCCACGTG TCTCGTCGCGCCTTCGCCGAACGCAGCCGTCCGGCGCGTCGCGCGGCCCG CCGGACCGCGGCATCCACAGCGTGTGCTGGACGCTGGACGTGCGCGTCGG CAACGGCGACCACCTGCTCACCATTGTGCCGCTCAAGGAGGGGCCGGAGA ACCTGGTCCGCATCTCGCACGTCATCGTGCCCAAGTAG back to top
|