mRNA_7917 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351561
Unique NamemRNA_7917
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A836C801_9STRA (PhoD-like phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C801_9STRA)

HSP 1 Score: 936 bits (2420), Expect = 0.000e+0
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 1
Query:    1 MVDVNDVDYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVDIKTVAANPLTIALINTDSWAGYKASQQQLLAAMENVQDVIILTGDIHTPFAMQVFQKANGQPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAERESWKYVTCSGTNTVVEAADAAC 1398
            MVDVNDVDYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVDIKTVAANPLTIALINTDSWAGYKASQQQLLAAMENVQDVIILTGDIHTPFAMQVFQKANGQPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAERESWKYVTCSGTNTVVEAADAAC
Sbjct:    1 MVDVNDVDYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVDIKTVAANPLTIALINTDSWAGYKASQQQLLAAMENVQDVIILTGDIHTPFAMQVFQKANGQPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAERESWKYVTCSGTNTVVEAADAAC 466          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: UPI001EF121A4 (alkaline phosphatase D family protein n=1 Tax=Marinobacter pelagius TaxID=379482 RepID=UPI001EF121A4)

HSP 1 Score: 270 bits (691), Expect = 1.760e-80
Identity = 168/445 (37.75%), Postives = 241/445 (54.16%), Query Frame = 1
Query:   16 DVDYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTD-----------TVDIKTVAANPLTIALINTDSWAGYKASQQQLLAAMEN--VQDVIILTGDIHTPFAMQVF-------QKANGQPYAAEYVTTSITSPGIGEFAQDGLGIGP-AIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQY 1287
            D D+ VKVD+  L+P T YYYQFSV  G  K+ VGRT+T P    A ++   A VSC+ YAYG F+ Y  ++E+  DLD +LHLGDYIYEYG     D                    G+  LP    + L DYRQR+A Y TD NL  +H+  P I + DDHE  ++ Y DGA  HD AT+G +  R  A ++A+ EW+P R+        R +R F+FG L +L+MLDTR +GRD Q   P     F D        +IM + QM+W+T+ LATSTA W++IG QV F +           T+ I  V+A    +  +N D W GY A ++++L  +E   + + +I TGDIHT +A +++       + +   P AAE+V  S+TSPG   F ++  G+   A+Q       LA+P++  +EL   G+ +   T     A++
Sbjct:  113 DRDFCVKVDMAGLQPDTWYYYQFSV--GGEKSPVGRTRTFPGSSGAAERARFAVVSCSNYAYGLFSVYKAVSEQ-SDLDFILHLGDYIYEYGPGEYGDFP------------------GRDPLPAHEIIELSDYRQRHAQYKTDANLQSVHQQFPMICIWDDHESANDSYRDGAENHDEATEGGWSERREAAIQAYFEWLPIRESGTETG--RVWRKFEFGGLIDLLMLDTRLEGRDLQVSSPADPGRFDDQ------RRIMSEEQMSWLTEGLATSTASWRMIGQQVMFAELNIVRTLDAARTLGIDDVSAFNGQLLSLNMDQWDGYVADRKRILDTLEGGKIDNTVIFTGDIHTSWANEIYADPGNLLENSLAPPLAAEFVAPSVTSPG---FPEEIAGLAEVAVQ-------LANPHMKYVELKTPGFILVDVTTERTQAEF 518          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A095UP56_9GAMM (Twin-arginine translocation pathway signal n=2 Tax=Alcanivorax nanhaiticus TaxID=1177154 RepID=A0A095UP56_9GAMM)

HSP 1 Score: 267 bits (682), Expect = 9.880e-80
Identity = 169/448 (37.72%), Postives = 238/448 (53.12%), Query Frame = 1
Query:   16 DVDYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTD---------TVDIKTVAANPLTIALINTDSWAGYKASQQQLLAAME--NVQDVIILTGDIHTPFAMQVFQKANG-------QPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDI 1305
            D DY VK+D   L+P   YYYQFSV  G  ++ VGRT+T PA  + +D+   A VSCA Y YG F+ Y  +AE + DLD VLHLGDY+YEYG     D  E                  +  LPP   V+L DYRQR+A Y TD +L  LH+  P I V DDHE  DN Y DGA  H P T+G ++ R     +A+ EW+P R  R P  Y   YR FQ+G L +L MLDTR +GRD+Q   P      +D A+ +    ++   QM ++ D L+ S AQW+ IG QV F           T D   + +N   ++ IN D W GY A + ++L  ++  N+ +V++LTGDIHT +A ++++  +        +P AAE+VT ++TSPG  + A +  GI   + N         P++  +E    G+ +   T     A++Y    I
Sbjct:   57 DGDYCVKIDADGLQPDHWYYYQFSV--GGERSPVGRTRTFPASGSFIDRARFAVVSCANYPYGFFSVYRAVAE-HADLDFVLHLGDYLYEYGPGEYGDFPE------------------RDPLPPQEMVTLADYRQRHAQYKTDDDLQALHQQFPMIAVWDDHESTDNSYRDGAENHQPLTEGDWEARKAVSQQAYFEWLPIRP-REPGNYSVIYRQFQYGDLIDLTMLDTRLEGRDEQLTVP------LDPARNSEDRHLISADQMDFLLDSLSQSNAQWRFIGQQVMFGQLNIAELPSLTEDQAQLRSN---LSAINMDQWDGYAADRLKILNHIDDNNIDNVVVLTGDIHTSWASEIYRNPSSLLGDLFDKPLAAEFVTPAVTSPGFPDGAAELAGILIPVVN---------PHIRYVEAKSRGFILVDVTRARAQAEFYYAQSI 464          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A0L0HF06_SPIPD (Uncharacterized protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HF06_SPIPD)

HSP 1 Score: 266 bits (681), Expect = 3.900e-79
Identity = 175/444 (39.41%), Postives = 243/444 (54.73%), Query Frame = 1
Query:   16 DVDYTVKVDVKQLEPATVYYYQFSVA--KGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNK-IMGDVQMAWITDKLATSTA---QWKVIGNQVPFTDTVDIKTVAANPLTIA--LINTDSWAGYKASQQQLLAAM--ENVQDVIILTGDIHTPFAMQV---------FQKANGQ-PYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQY 1287
            DVDYTVKVDVK L+PAT YYY+F V    G   + +G+T TLP EDA V+   +A VSC+   YG F AY  I+ +  D+D+VLHLGDYIYEY N    DGT                 +G+   P    V+L DYR R+A Y TD +L   H+ +PWI V DDHE  DN ++DGA  H+P+TQGP++ R  A +RA+ E++P R         + YR+F  G L +LIMLDTR  GRDK   + T         +I A  + I+G  Q +W+ ++L+ S+    QW+++GNQV F           +P+ I   L   DSW GY AS+ +L++ +   N+Q+ +ILTGDIHT FA  V         +   +G+     E+V TS+TSPG G  A  GL              ++ P++       HGY + T TA +V+ +Y
Sbjct:  136 DVDYTVKVDVKGLQPATTYYYRFVVQTPSGTATSPIGKTHTLPTEDADVESYKLAVVSCSNLPYGFFNAYNGISHR-TDVDVVLHLGDYIYEYANKKYGDGTA----------------IGRIPQPDKDIVTLSDYRTRHAQYKTDPDLQLAHQNVPWITVWDDHEFADNAWKDGAGNHNPSTQGPWEERKLAAMRAYFEYMPIRSAVIDGK-GKIYRSFHVGKLLDLIMLDTRIAGRDKTDLRKTQ--------EINAPGRSILGADQESWLYNELSKSSQGGKQWRLLGNQVTF-----------SPMKILGQLTGADSWDGYPASRARLMSHLTDNNIQNTVILTGDIHTAFAFDVPEDPYNIFKYGPISGRGSVLVEFVGTSVTSPGAGAVAVAGLR-------------MSQPHLKFGNGKDHGYMVVTVTAEKVSTEY 529          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A366G5P9_9GAMM (Alkaline phosphatase D n=2 Tax=Marinobacter pelagius TaxID=379482 RepID=A0A366G5P9_9GAMM)

HSP 1 Score: 265 bits (677), Expect = 2.030e-78
Identity = 168/450 (37.33%), Postives = 239/450 (53.11%), Query Frame = 1
Query:   16 DVDYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVDIKTV-AANPL----------TIALINTDSWAGYKASQQQLLAAM--ENVQDVIILTGDIHTPFAMQVFQKANG-------QPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDI 1305
            D+D+ VKVDV  L P T YYYQFSV  G+ K+ VGRT+T P      ++   A VSC+ +AYG F+ Y  ++E+  DLD +LHLGDYIYEYG     D                    G+  LP    + L DYRQR+A Y TD NL  +H+  P I + DDHE  ++ Y DGA  HD AT+G +  R  A ++A+ EW+P R+        R +R FQFG L +L MLDTR +GRD Q   P     F D        +IM + QM+W+T  L+ STA W++IG QV F +   ++T+ AA  L           +  +N D W GY A ++ +L  +  E++ + +I TGDIHT +A +V+  +          P AAE+VT S+TSPG   F ++  G+  A         LA+P++  +EL   G+ +   T     A++  +  I
Sbjct:  113 DLDFCVKVDVTGLRPDTWYYYQFSV--GSAKSVVGRTRTFPDTRMPAERARFAVVSCSNHAYGLFSVYKAVSEQ-ADLDFILHLGDYIYEYGPGEYGDFP------------------GRDPLPAHEIIELSDYRQRHAQYKTDANLQAVHQQFPMICIWDDHESANDSYRDGAENHDEATEGGWSERRAAAIQAYFEWLPIREIGTERG--RVWRKFQFGKLIDLFMLDTRLEGRDMQVSSPADPGRFDDQ------RRIMSEEQMSWLTRGLSDSTATWRMIGQQVMFAELNIVRTLDAARTLGMEDTSAFNGQLLSLNMDQWDGYVADRENILQTLAGESIGNTVIFTGDIHTSWANEVYADSGNLLENSLTAPLAAEFVTPSVTSPG---FPEEIAGVAEAAVQ------LANPHMKYVELKSPGFILVDVTMARTQAEFLYVQSI 524          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A507ENS7_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507ENS7_9FUNG)

HSP 1 Score: 263 bits (672), Expect = 8.450e-78
Identity = 183/483 (37.89%), Postives = 251/483 (51.97%), Query Frame = 1
Query:    1 MVDVNDVDYTVKVDVKQLEPATVYYYQFSVA--KGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATST---AQWKVIGNQVPFTDTVDIKTVAANPLTIALINT--DSWAGYKASQQQLLAAM--ENVQDVIILTGDIHTPFAMQVFQKA-NGQPYA---------AEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAERESWKYVTC-SGTNTVVEAAD 1389
            +V   DVDYTVKVDVK L+P T YYY+F V    G   + VG+T TLP EDA ++   +A VSC+    G F AY  I+ +  D+D+VLHLGDYIYEYGN    DGT                 +G+   P    V+L DYR R+A Y TD +L   HR +PWI V DDHE  DN ++DGAA HDPATQGP++ R  A +RA+ E++P R         + YR+F  G L +L+MLDTR  GRDK        D+  D         ++G  Q +W+ ++L+ S+    +W+++GNQV F            P+ I    T  DSW GY AS+ +L++ +   N+ + ++LTGDIHT FA  V +   N   Y           E+V TS+TSPG G  A  GL              L+ P++       HGY + T T  +V+ +Y  +  I   T A   ++    T  SG  T V+  D
Sbjct:  132 VVTTGDVDYTVKVDVKGLQPTTTYYYRFVVETPSGTATSPVGKTHTLPTEDADIESYKLAVVSCSNLPQGFFNAYNGISRR-TDVDVVLHLGDYIYEYGNKKYGDGTA----------------IGRIPQPDKDIVTLSDYRTRHAQYKTDPDLQLAHRNVPWITVWDDHEFADNSWKDGAANHDPATQGPWEARKLAAMRAYFEYMPIRSALIDGK-GKIYRSFHVGKLLDLMMLDTRIIGRDK-------TDEKKDQVINAPGRTLLGAEQESWLYNQLSESSQGGTKWRLLGNQVTFA-----------PMKILGQTTFGDSWDGYPASRARLMSHLIDNNIHNTVVLTGDIHTAFAFDVPENPYNPFKYGPISGRGSVLVEFVGTSVTSPGAGFAAVAGLR-------------LSQPHLKFGNGKDHGYMLVTVTEEKVSTEYVIVGAIDRRTRAEFTDAIVETTSGSGRITSVQTFD 565          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A2D9T5H0_9DELT (Uncharacterized protein n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9T5H0_9DELT)

HSP 1 Score: 262 bits (670), Expect = 1.180e-77
Identity = 169/447 (37.81%), Postives = 243/447 (54.36%), Query Frame = 1
Query:   22 DYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVDIKTVAANPLTIALINTDSWAGYKASQQQLLAAMENVQDVIILTGDIHTPFAMQV---------FQKANGQ-PYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLA-SPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAE 1329
            D+TVKVDV  L+PAT YYYQFS A     + +GRT+T P+   AVD++  A +SC+ + +G F AY  +AE+  DLD VLHLGDYIYEYG            + +   A+           PP   V+LEDYRQRYA Y  D +L  +H+  P+IVV DDHE  DN + DGA  HDPAT+G ++ R     +A+ EW+P R+   P    + +R+  +G L EL+MLDTR   RD +A Q    DD  D  +     +I+G+ Q AW+ D+L  +TAQWKV+G QV F     +    A+  T   IN D W G+ A++++L+       DV++LTGDIH+ + M +         +    G    A E+V++++TSP          GI  A+  +I +   A +P++  + L   GY++   TA    A Y+ +D I     A E
Sbjct:  118 DFTVKVDVTGLQPATTYYYQFSGA--GTSSRIGRTRTAPS--GAVDRVRFAVMSCSSFNHGYFHAYRYVAER-ADLDAVLHLGDYIYEYGPDE---------YGRTRAAE-----------PPHEIVTLEDYRQRYAQYRRDGDLQAVHQQHPFIVVWDDHETADNSFRDGAENHDPATEGDWEARKAVAFQAYLEWMPIRETGVPL---QIWRSIPYGDLVELLMLDTRIYARDAEATQ----DDRHDPER-----QILGEEQEAWLVDRLENTTAQWKVLGQQVMFGQFEGM----ASDGTWDAINLDQWDGFTAARERLMGHFAATADVVVLTGDIHSSWVMDITPTPHDAATYDPTTGDGSVAVEFVSSAVTSP----------GIPGAVGEVIAETARADNPHIHYVNLGQRGYYVLDITADRAQADYFLLDGIEVDEGAQE 513          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A831M8K8_9BACT (Alkaline phosphatase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A831M8K8_9BACT)

HSP 1 Score: 260 bits (664), Expect = 2.610e-77
Identity = 181/465 (38.92%), Postives = 246/465 (52.90%), Query Frame = 1
Query:   22 DYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAP--QPTSADDFVDYAKITATNKIMGDVQMAWITDKLATST---AQWKVIGNQVPFTDTVDIKTVAANPLTIALINTDSWAGYKASQQQLLAAMEN--VQDVIILTGDIHTPFAMQV----FQKANGQPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAERESWKYVTCSGTNTVVEA 1383
            D+TVKVDV +L+P   YYYQF+ A     + +GRT+TLP    A  ++ +A  +CA   YG F AY  +A    DLD V+H+GDY YEY N    DG  SAL              G+  +P    ++L DYRQRYA Y TD +L E HR+ PWIVV DDHE  +N Y DGA  H+PAT+GP+ +R    L+AW+EW+P R+   P      YR F+FG+LA LIMLDTR  GR  Q P   P   D          +  I+G  Q  W+  +LA S    A W ++G QV       ++    +PL     NTD W GY AS+++LL  +E   + +V+IL+GDIH+ +A ++    FQ  N  P A E+V   ITSPGI E  Q G      I    V+A    P+V  + LF  GY +     + V AQ++ +  +  P    E      +T  G+N +  A
Sbjct:   88 DFTVKVDVARLKPGMTYYYQFASANAL--SPIGRTRTLPL--GATPRLRLALAACANLPYGYFHAYRHMAAL-PDLDAVVHVGDYFYEYANSAYGDG--SAL--------------GRVPIPDKELITLSDYRQRYAQYRTDPDLQEAHRLHPWIVVYDDHETANNSYTDGAENHNPATEGPWSVRRAVALQAWNEWLPVRE--QPFLDGNIYRTFRFGSLATLIMLDTRLAGRSAQLPASSPLLND---------PSRSILGHHQEQWLQRELAASVEHGALWHMVGQQVMMGQ---LRNTDGSPL-----NTDQWDGYPASRERLLRFIEANAIPNVVILSGDIHSSWANEIAIDPFQP-NAAPLAVEFVAPGITSPGIAEGTQAG------ILQRFVEAT--HPHVKYVNLFRRGYTLIDADESRVQAQWFHVVSLTTPQPDMELAR-TLITRVGSNRITPA 502          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A2E7J8J9_9GAMM (Twin-arginine translocation pathway signal n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E7J8J9_9GAMM)

HSP 1 Score: 262 bits (670), Expect = 3.480e-77
Identity = 166/459 (36.17%), Postives = 244/459 (53.16%), Query Frame = 1
Query:   22 DYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYE-DLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVDIKTVAANPLTIAL--------INTDSWAGYKASQQQLLAAME--NVQDVIILTGDIHTPFAMQVFQKA-------NGQPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAERESWK 1344
            DYTVKVD   L+P T YY+ F    G V + VGRT+T PA+   +++   A+VSCA YAYG F+AY  +A+    DLD VLHLGDY+YEY     A GT               +   +S  P    VSL DYR R+A Y TD +L  +H+  P I + DDHE  ++ Y+DGA  H P ++G +  R    ++A+ EW+P R+   P   +  +R+FQ+G L +L MLDTR +GRD+Q   P   D+           K++ D QM W  D +  S + W++IG QV F      +    + L+  L        +N D W GY AS+ ++L+ +E  N+ +VI+ TGDIHT +A ++++           +  A E+VT S+TSPG  E      G  PA+   I    +A+P++   EL   G+ +T  T     A+YY +  I DP+ A + ++ K
Sbjct:  112 DYTVKVDASGLDPDTWYYFSFGA--GNVVSPVGRTRTFPAKTQRIERARFATVSCANYAYGHFSAYQALADVNRWDLDFVLHLGDYLYEY-----APGT-----------YDDPSVPNRSHEPANEIVSLSDYRIRHAQYKTDTHLQAIHQQYPMICIWDDHESTNDSYKDGAENHQPESEGDWPSRKARAIQAYMEWMPVRE--KPEDPESIWRSFQYGDLIDLWMLDTRLEGRDQQVSSPVGLDNNA------PDRKLISDQQMNWWLDGMTQSQSVWRMIGQQVMFAQLNIAELPTPDALSEILPFGTLQQGLNMDQWDGYTASRNRVLSHIEENNIDNVIVFTGDIHTSWANEIYRNPATLIGDLTDEALAVEFVTPSVTSPGFPE------GTSPAVSTAIS---IANPHIKYSELETRGFVVTDATRQRTQAEYYYVTSIADPSRAGDLDNSK 535          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A2D9URE9_9GAMM (Alkaline phosphatase n=10 Tax=Alcanivorax TaxID=59753 RepID=A0A2D9URE9_9GAMM)

HSP 1 Score: 262 bits (669), Expect = 3.510e-77
Identity = 165/443 (37.25%), Postives = 237/443 (53.50%), Query Frame = 1
Query:   22 DYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDAAVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVNGADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDVNLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRAWHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTSADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVDIKTVAANPLT------IALINTDSWAGYKASQQQLLAAME--NVQDVIILTGDIHTPFAMQVFQKAN-------GQPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVLASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDI 1305
            D+ VK D   LE    YYY+FSVA    ++ +GRT+TLPA D  VD+   A VSCA  ++G F+ Y  +AE + DLD VLHLGDY+YEYG     D  +             R PV     PP   V+LEDYRQR+A Y  DV+L  +H+  P IV+ DDHE  ++ Y+DGA  H P T+G ++ R N   R + EW+P R+ + P  +   YR FQFG L +L MLDTR +GRD+    P       D A+     +++ D QM W+ D L+ STA+W+ IG QV F      +  + N         ++ IN D W GY A + ++L  ++  N+ +V+ILTGDIHT +A ++++            P AAE+VT ++TSPG  E A +  G+   + N         P++  +E    G+ +         A++Y   DI
Sbjct:  119 DFCVKQDATGLEAGRWYYYRFSVADQ--RSPIGRTRTLPAADRYVDRARFAVVSCANISHGYFSVYKTLAE-HGDLDFVLHLGDYLYEYGIGEYGDVPD-------------RDPV-----PPHEMVTLEDYRQRHAQYKGDVDLQAVHQQYPMIVIWDDHESTNDSYQDGAENHQPLTEGDWETRKNIARRVYFEWMPIRE-QNPGDFATIYRRFQFGDLIDLSMLDTRLEGRDEPLSLP------FDPARNDPERRLISDTQMQWLLDGLSASTARWRFIGQQVMFAQLNIAEIPSLNEHAPQLRGNLSAINMDQWDGYAADRLKILNHLDDNNIDNVVILTGDIHTSWASEIYRNPGTLLGDLFDAPLAAEFVTPAVTSPGFPEGAAELAGVAVPVVN---------PHIRYVEAKSRGFILMDVNHQRAQAEFYYARDI 524          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A835YT37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT37_9STRA)

HSP 1 Score: 1185 bits (3066), Expect = 0.000e+0
Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 1
Query:    1 MRASPQEYVCRSLKDTLDENASELLGAVNGFAAGSWPLLLSAAKLDAARLPPASAAEEAVARGERAAAPKSGGALRPPRLPPLPPLDVFEGDGQEAMARSERAAAAAAAAVGVSEGEAQXXXXXXXXXXXXXXQTAPXXXXXXXXXXXRVRKPXXXXXXXXXXXXXXRDCELPMRLPXXXXXXXXXXXXXGRPPTRSRVLLLRLLLEFSLVLEEQGPLGMQIDIVELPGGGRRLLVAGLVPGAQVNTNFSYNFKLRNRKYAVEQGMLLGAGLVPGAEAERQLGSAASEVVGSELVGLGSERLDDRPLEHCLTLLRDAPRPVKIVTPADVIRVSFTDQSLGLRFKPSPLHGPTATEIAGFARAPDGTERVAEACGQVAPGQVLWAINGNRVLGVAFQQVVQQLKGLPRPIEFALLDVPDVHVEFTAPPLDLRLQYMQGHIVVIDIVKVESPLCEKLQQCHMLLAVTNLSLPSPHHQYACKQASQSALTTADLRIGGLCAPALCAEGLSISRVSIPEGHVLLTVNGLSLPSPHGKYDKDVAMLSAPTMYPLKLRFARDNSAATGATPPGSXXXXXXXXXXXXXXXXXXADGYMGSGYVTSYKRSMGRAVEVTVADPEDMAMAFEKGKDGRPRIKALSLVDGPARHSNRVQVGMVLMAINGVPLSKKANTCASCRQLLAATSYPATITFRNMSAFLAAAQRL 2097
            MRASPQEYVCRSLKDTLDENASELLGAVNGFAAGSWPLLLSAAKLDAARLPPASAAEEAVARGERAAAPKSGGALRPPRLPPLPPLDVFEGDGQEAMARSERAAAAAAAAVGVSEGEAQXXXXXXXXXXXXXXQTAPXXXXXXXXXXXRVRKPXXXXXXXXXXXXXXRDCELPMRLPXXXXXXXXXXXXXGRPPTRSRVLLLRLLLEFSLVLEEQGPLGMQIDIVELPGGGRRLLVAGLVPGAQVNTNFSYNFKLRNRKYAVEQGMLLGAGLVPGAEAERQLGSAASEVVGSELVGLGSERLDDRPLEHCLTLLRDAPRPVKIVTPADVIRVSFTDQSLGLRFKPSPLHGPTATEIAGFARAPDGTERVAEACGQVAPGQVLWAINGNRVLGVAFQQVVQQLKGLPRPIEFALLDVPDVHVEFTAPPLDLRLQYMQGHIVVIDIVKVESPLCEKLQQCHMLLAVTNLSLPSPHHQYACKQASQSALTTADLRIGGLCAPALCAEGLSISRVSIPEGHVLLTVNGLSLPSPHGKYDKDVAMLSAPTMYPLKLRFARDNSAATGATPPGSXXXXXXXXXXXXXXXXXXADGYMGSGYVTSYKRSMGRAVEVTVADPEDMAMAFEKGKDGRPRIKALSLVDGPARHSNRVQVGMVLMAINGVPLSKKANTCASCRQLLAATSYPATITFRNMSAFLAAAQRL
Sbjct:    1 MRASPQEYVCRSLKDTLDENASELLGAVNGFAAGSWPLLLSAAKLDAARLPPASAAEEAVARGERAAAPKSGGALRPPRLPPLPPLDVFEGDGQEAMARSERAAAAAAAAVGVSEGEAQXXXXXXXXXXXXXXQTAPXXXXXXXXXXXRVRKPXXXXXXXXXXXXXXRDCELPMRLPXXXXXXXXXXXXXGRPPTRSRVLLLRLLLEFSLVLEEQGPLGMQIDIVELPGGGRRLLVAGLVPGAQVNTNFSYNFKLRNRKYAVEQGMLLGAGLVPGAEAERQLGSAASEVVGSELVGLGSERLDDRPLEHCLTLLRDAPRPVKIVTPADVIRVSFTDQSLGLRFKPSPLHGPTATEIAGFARAPDGTERVAEACGQVAPGQVLWAINGNRVLGVAFQQVVQQLKGLPRPIEFALLDVPDVHVEFTAPPLDLRLQYMQGHIVVIDIVKVESPLCEKLQQCHMLLAVTNLSLPSPHHQYACKQASQSALTTADLRIGGLCAPALCAEGLSISRVSIPEGHVLLTVNGLSLPSPHGKYDKDVAMLSAPTMYPLKLRFARDNSAATGATPPGSXXXXXXXXXXXXXXXXXXADGYMGSGYVTSYKRSMGRAVEVTVADPEDMAMAFEKGKDGRPRIKALSLVDGPARHSNRVQVGMVLMAINGVPLSKKANTCASCRQLLAATSYPATITFRNMSAFLAAAQRL 699          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: D8LTI7_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI7_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 2.840e-39
Identity = 142/496 (28.63%), Postives = 218/496 (43.95%), Query Frame = 1
Query:  688 GGRRLLVAGLVPGAQVNTNFSYNFKLRNRKYAVE---QGMLLGAGLVPGAEAERQLGSAASEVVGSELVGLGSERLDDRPLEHCLTLLRDAPRPVKIV-------------------------TPADVIRVSFTDQSLGLRFKPSPLHGPTATEIAGFARAPDGTERVAEACGQVAPGQVLWAINGNRVLGVAFQQVVQQLKGLPRPIEFALLDVPDVHVEFTAPPLDLRLQYMQGHIVVIDIVKVESPLCEKLQQCHMLLAVTNLSLPSPHHQYACKQASQSALTTADLRIGGLCAPALCAEGLSISRVSIPEGHVLLTVNGLSLPSPHGKYDKDVAMLSAPTMYPLKLRFARDNSAATGATPPGSXXXXXXXXXXXXXXXXXXADGYMGS-GYVTSYKRSMGRAV-EVTVADPEDMAMAFEKGKDGRPRIKALSLVDGPARHSNRVQVGMVLMAINGVPLSKKANTCAS-CRQLLAATSYPATITFRNMSAFLA 2082
            GG    +AGL  GA        N +     + V+   + +L   G V     +   G    EV G+EL+ +G   ++       L LLR +PRPV+++                          P  ++  +F  +SLG++F+ S   G   T + GF+R  +G  R AEA G + PGQ+L+++NG RV+G  F  +V+ L+ +PRP+ F L    DV V   APPL+L L+ + G + V    +V +                                                  AL A G      ++  G  L++VNG+ LP   G Y KD A+L AP M+P++LR  R  +AA  A                       A    GS   +  Y+ ++  +  EV  A PED+++  E+GKDGRP + ++  V G       +Q GMVL+AI+G P++       S CR+ L A +YP T+TFR+M  +L+
Sbjct: 1088 GGVMASIAGLAGGATGAAAVVVNHRALEEAFVVQGEGRRVLNLKGFV-----QEDFGVVFDEV-GAELLSVGGASVEGLEGTKVLGLLRSSPRPVQMMFRCYVPDVAEAVAASALGKDAEALPPPDGLVTATFKQRSLGVKFRASSTLGTRVTTVGGFSRDLEGRMREAEASGLLVPGQLLYSVNGRRVIGQEFADLVRGLQKVPRPVTFGLAPSIDVRVTVDAPPLELELRRVSGRVTVTGFCEVPT--------------------------------------------------ALEASG------AVQPGDTLISVNGIPLPGA-GCYRKDAALLEAPGMFPMRLRIRRAGAAAEDAD------GGDAEGFVDPARGGRGAQALEGSLSRLKQYQNAVSASPSEVLAATPEDLSLKVEEGKDGRPVVLSMPYVRGKLEKGGVIQPGMVLVAIDGAPIAGGHFASVSDCRRSLDAVAYPCTLTFRDMPKWLS 1514          
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Match: A0A7S2WE33_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WE33_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.060e-8
Identity = 84/307 (27.36%), Postives = 118/307 (38.44%), Query Frame = 1
Query:  628 LVLEEQGPLGMQIDIVELPGGGRRLLVAGLVPGAQVNTNFSYNFKLRNRKYAVEQGMLLGAGLV-PGAEAERQLGSAASEVVGSELVGLGSERLDDRPLEHCLTLLRDAPRP--VKIVTPADVIR--------------------------VSFTDQSLGLRFKPSPLHGPTATEIAGFARAPDGTERVAEACGQVAPGQVLWAINGNRVLGVAFQQVVQQLKGLPRPIE------FALLDVPDVHVEFTAPPLDLRLQYMQG----HIVVIDIVKVE---SPL--CEKLQQCHMLLAVTNLSLPSP 1416
            LVL ++GPLG+ +DI                                 R Y    G + G   V P  E E+  G  A    G+ LVG+    L ++ +   L L++   RP  +  V PA  +                           V F   +LGLR   S L  P   E+AGFARAP+G+   AEAC  + PG +L  +N  ++  +   QV   L+      E       A L  P V V+F  PPLD+ L  +      H+ VI   +      P+    KL+    LLA   L+ P P
Sbjct:  269 LVLPDEGPLGLHLDIST------------------------------KRSYVRFSGPVEGGQAVRPVQELEKDFGPLA----GAFLVGVDDVNLSNKSVAEALVLIKQPTRPKIMTFVLPAPKLESDQPGGTSSQHTQPSPQGGTDLSPIFVEFRSTTLGLRLNASRLI-PELVEVAGFARAPNGSLLPAEACQVLEPGMLLLGVNNVKIWKMPLSQVAALLRDAALATEKGTTVRLAFLPSPLVTVDFKEPPLDMVLAQVPAPGGRHLTVITGFQPSHHPGPMERSGKLRPGDALLAANGLTFPGP 540          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C801_9STRA0.000e+0100.00PhoD-like phosphatase-domain-containing protein n=... [more]
UPI001EF121A41.760e-8037.75alkaline phosphatase D family protein n=1 Tax=Mari... [more]
A0A095UP56_9GAMM9.880e-8037.72Twin-arginine translocation pathway signal n=2 Tax... [more]
A0A0L0HF06_SPIPD3.900e-7939.41Uncharacterized protein n=1 Tax=Spizellomyces punc... [more]
A0A366G5P9_9GAMM2.030e-7837.33Alkaline phosphatase D n=2 Tax=Marinobacter pelagi... [more]
A0A507ENS7_9FUNG8.450e-7837.89Uncharacterized protein n=1 Tax=Spizellomyces sp. ... [more]
A0A2D9T5H0_9DELT1.180e-7737.81Uncharacterized protein n=1 Tax=Sandaracinus sp. T... [more]
A0A831M8K8_9BACT2.610e-7738.92Alkaline phosphatase n=1 Tax=Bryobacteraceae bacte... [more]
A0A2E7J8J9_9GAMM3.480e-7736.17Twin-arginine translocation pathway signal n=1 Tax... [more]
A0A2D9URE9_9GAMM3.510e-7737.25Alkaline phosphatase n=10 Tax=Alcanivorax TaxID=59... [more]

Pages

back to top
BLAST of jgi.p|Trimin1|351561 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YT37_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTI7_ECTSI2.840e-3928.63Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2WE33_9STRA1.060e-827.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:49275..53952 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351561|estExt_Genemark1.C_Ctg_940006
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00017
KEGG ReactionR04620
KEGG ModuleM00126
KEGG Pathwayko00790,ko01100,ko02020,map00790,map01100,map02020
KEGG koko:K01113
EC3.1.3.1
Descriptionalkaline phosphatase
COG categoryP
Max annot lvl1236|Gammaproteobacteria
EggNOG OGsCOG3540@1|root,COG3540@2|Bacteria,1MWAF@1224|Proteobacteria,1RNY4@1236|Gammaproteobacteria,464EY@72275|Alteromonadaceae
Evalue5.27e-81
Seed ortholog1318628.MARLIPOL_02250
Hectar predicted targeting categoryother localisation
TranscriptId351883
TrackFilteredModels1
ProteinId351561
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351561gene_7917Tribonema minus UTEX_B_3156 geneContig_94 49275..53952 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351561Trimin1|351561|estExt_Genemark1.C_Ctg_940006Tribonema minus UTEX_B_3156 polypeptideContig_94 49375..53952 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7917_7exon_7917_7Tribonema minus UTEX_B_3156 exonContig_94 49275..49745 -
exon_7917_6exon_7917_6Tribonema minus UTEX_B_3156 exonContig_94 50092..50160 -
exon_7917_5exon_7917_5Tribonema minus UTEX_B_3156 exonContig_94 50793..51025 -
exon_7917_4exon_7917_4Tribonema minus UTEX_B_3156 exonContig_94 51654..51874 -
exon_7917_3exon_7917_3Tribonema minus UTEX_B_3156 exonContig_94 52681..52919 -
exon_7917_2exon_7917_2Tribonema minus UTEX_B_3156 exonContig_94 53331..53583 -
exon_7917_1exon_7917_1Tribonema minus UTEX_B_3156 exonContig_94 53938..53952 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_7917UTR3_7917Tribonema minus UTEX_B_3156 three_prime_UTRContig_94 49275..49374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7917CDS_7917Tribonema minus UTEX_B_3156 CDSContig_94 53938..53952 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7917 ID=mRNA_7917|Name=jgi.p|Trimin1|351561|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1501bp|location=Sequence derived from alignment at Contig_94:49275..53952- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGACGTGAACGATGTGGATTACACCGTCAAGGTGGATGTCAAACA
ACTGGAGCCCGCAACTGTGTACTACTACCAGTTCAGCGTTGCAAAAGGCG
CAGTGAAAACGGCGGTCGGGCGCACAAAGACACTGCCTGCGGAAGACGCT
GCTGTTGATAAAATAGCCATTGCCTCCGTCAGCTGCGCCTACTACGCATA
TGGAGAGTTCACGGCCTACGGGAAGATTGCTGAGAAGTACGAGGACTTGG
ATATTGTGCTGCACTTGGGCGACTACATCTATGAGTACGGCAACGTCAAC
GGCGCCGACGGCACGGAGTCTGCGCTGTTCAGCAAGGTCCTCCTGGCTCA
GCAGTCGCGCGCGCCCGTGGGCAAGAGCATGCTGCCGCCCACCACGTGCG
TCAGCCTGGAGGACTACCGGCAGCGCTATGCCCTCTACCACACAGATGTC
AACCTGGTCGAGCTGCACAGGGTGCTGCCCTGGATTGTGGTGCCGGATGA
TCACGAGGTCGTTGACAATGGCTATGAGGACGGTGCCGCTGCCCACGACC
CTGCCACCCAGGGGCCCTACCAGCTGCGCGTAAACGCAGGCCTCAGAGCG
TGGCACGAGTGGGTCCCCAACCGCCAGTTTCGCGCGCCCGCTGCCTATCA
GCGCTTCTACCGCGCGTTCCAGTTTGGGACGCTCGCAGAGCTGATCATGC
TGGACACGCGCTACGACGGCCGAGACAAGCAGGCACCCCAGCCTACATCT
GCCGATGACTTTGTTGACTATGCTAAGATCACCGCCACCAACAAGATCAT
GGGCGATGTTCAGATGGCTTGGATCACCGACAAGCTAGCCACGTCCACTG
CGCAGTGGAAGGTCATTGGCAACCAAGTGCCCTTCACTGACACCGTGGAC
ATCAAGACAGTGGCGGCAAACCCCTTGACCATTGCGCTGATCAACACTGA
CTCTTGGGCCGGTTACAAAGCGTCCCAGCAGCAGCTGCTGGCAGCGATGG
AAAATGTTCAAGATGTCATCATCCTGACAGGCGACATCCACACGCCGTTC
GCGATGCAAGTCTTCCAGAAAGCCAACGGCCAGCCGTACGCCGCAGAGTA
CGTGACCACCAGCATCACCTCTCCCGGCATTGGCGAATTCGCACAGGACG
GCCTGGGCATCGGCCCCGCCATTCAGAACATCATTGTTGACGCAGTTCTC
GCAAGCCCAAATGTCGTCAACCTTGAGCTCTTCTGTCACGGCTACCACAT
CACCACGTACACGGCCACGGAGGTCACAGCACAGTACTACTGCATGGATG
ACATACACGACCCGACCAACGCCGCGGAGCGCGAGTCGTGGAAGTACGTC
ACATGCAGCGGCACCAACACCGTGGTGGAGGCTGCGGATGCTGCGTGCTG
AGCGGTGTGTGCTGGTGATGAGCGCTGATGACTATGGCAGCAGCAGCAGC
AGTAGCAGCAGCAGCAGCAGCACAGCAGCGGCGGCAGTGGCAACAGCAGC
A
back to top

protein sequence of jgi.p|Trimin1|351561

>Trimin1|351561|estExt_Genemark1.C_Ctg_940006 ID=Trimin1|351561|estExt_Genemark1.C_Ctg_940006|Name=jgi.p|Trimin1|351561|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=467bp
MVDVNDVDYTVKVDVKQLEPATVYYYQFSVAKGAVKTAVGRTKTLPAEDA
AVDKIAIASVSCAYYAYGEFTAYGKIAEKYEDLDIVLHLGDYIYEYGNVN
GADGTESALFSKVLLAQQSRAPVGKSMLPPTTCVSLEDYRQRYALYHTDV
NLVELHRVLPWIVVPDDHEVVDNGYEDGAAAHDPATQGPYQLRVNAGLRA
WHEWVPNRQFRAPAAYQRFYRAFQFGTLAELIMLDTRYDGRDKQAPQPTS
ADDFVDYAKITATNKIMGDVQMAWITDKLATSTAQWKVIGNQVPFTDTVD
IKTVAANPLTIALINTDSWAGYKASQQQLLAAMENVQDVIILTGDIHTPF
AMQVFQKANGQPYAAEYVTTSITSPGIGEFAQDGLGIGPAIQNIIVDAVL
ASPNVVNLELFCHGYHITTYTATEVTAQYYCMDDIHDPTNAAERESWKYV
TCSGTNTVVEAADAAC*
back to top

mRNA from alignment at Contig_94:49275..53952-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7917 ID=mRNA_7917|Name=jgi.p|Trimin1|351561|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4678bp|location=Sequence derived from alignment at Contig_94:49275..53952- (Tribonema minus UTEX_B_3156 )
ATGGTGGACGTGAACGTGCTGCCTCGGATTATGCTGTGTCTGAATCTACA CTGCAGCTAACCAGTATCTGCCTCCCAATGTACATTGACTAGTCATCAGG TGCTAAGATTGTGGTGACAGATCACTTGCAGAGCACACGAAACTCGTGTC ACGGCGGTTGACAGCTGCGGGGTCATGCTGTGCTCTGGTCGCCAACCACT GCCTGCTGCAGTGCAATGCACCTTTGTAAATCATGCTCTGCACTCATCAT AATCACTGCTCAGGTCGTGAGGACCATTCCAGTGCCTGGCTGCTGCTGCT GCCGCGTTTCTGCATATACATACGTTCACCGTCCTCCTGTGCCTGACATG CCTGGTCGATTCACTACAGGATGTGGATTACACCGTCAAGGTGGATGTCA AACAACTGGAGCCCGCAACTGTGTACTACTACCAGTTCAGCGTTGCAAAA GGCGCAGTGAAAACGGCGGTCGGGCGCACAAAGACACTGCCTGCGGAAGA CGCTGCTGTTGATAAAATAGCCATTGCCTCCGTCAGCTGCGCCTACTACG CATATGGAGAGTTCACGGCCTACGGGAAGATTGCTGAGAAGTACGAGGAC TTGGATATTGTGCTGCACTTGGGTGAGTGCTCGTTGTCAACAACTGGTCA TTTGCGGCTTTTTCTGTTGTGCATGAGCTGTACAAGGTGATATTCGTGGA ACAGCTGGGCTAAGCTTGTCTGTAAGCGGACAGAGCACGTTGCACTCTGC TTGTCATGTTTGATTGCTTCTCGCAGACAAGTATCGTTGCACTTTGATGT GCACACTGCACCCTGCACTAGTACGAAGTATGCCTATTGCGTGCACCGCG ACACACCGATAATGCTGCAGCACCCGTCTGTGACTGTTCACAGAGCACAT GATGATGATCACTCAGTAACGTCACCCCAGCGCTCAGCATCACTCGCGTC TGCACCGTGACAGCTGAGCGACTCACTTACATGCACTCGTGCGTGTCCTG TCTGCCATCAACGCTCACCACACGCCCCCGCAGGCGACTACATCTATGAG TACGGCAACGTCAACGGCGCCGACGGCACGGAGTCTGCGCTGTTCAGCAA GGTCCTCCTGGCTCAGCAGTCGCGCGCGCCCGTGGGCAAGAGCATGCTGC CGCCCACCACGTGCGTCAGCCTGGAGGACTACCGGCAGCGCTATGCCCTC TACCACACAGATGTCAACCTGGTCGAGCTGCACAGGGTGCTGCCCTGGAT TGTGGTGCCGGATGATCACGAGGTGAGCGCTGAGCACTGTATAGGGTAGG TATCATGGAGCAGGGTATGTAGGCAGCAGGCTCATAGGGTATGTGTATGC TAGAGCAGAGTAGGTGGGTATCGTGGAGCACTGTGTGTTGGGGGCAGCAG GTGAAGGTGGTCGTGATCTGCAGCTGCAAATTTTGCGGTGGCATGGAATC TAATCTGAAGGACAATTCTTTCTGTAACATGCGTACGCCAGATAGTGAGG CTAACTGGCCACAAGCATGAGGGCGACATGCCGACTCATGACTCATGCCT AATGACTCAATACCATGGCGCATACATGACGCATACCTATCAAGTCATGC TTGGGCCACAAACGTGTGTTGCAGTTTCAGCAGAGATGTGCGCTATCGAC CGACTCTTGCAGAGCGCTTTTCCTGTGTGGACATGCACATCGCTGCTGCG CCGAAGTTAAGATCAGGTTTAGGGTTCAAGCAGCGATGCCTGGTGCAGAA ACAACCTTGCAAACAAGCATGGCATGCTGTGCAGCACGCGTCAGGGCTGC TCATTATGATCTCCACAAGCATGGTGTCGAACAAAGTCATACTAATATTC GCAACGCCAGCGGACCCCATGTCATGTTATCATACGTGACCCTTTGTACG CAATGTATACATGACACTGCACCTGCGACTCACATACCCCGCAGAAGCTG GCCAAGAGCTCATTTGTGCCGCCCTTGAGACCCTGCACCATCCAACAGTT TACCATCCAGCCACACATATGAAGCAAACCAGCCAGGCAGCTCTCTTATG CATGCCCCCCTTCTGCCCCCCTTGCCAGGTCGTTGACAATGGCTATGAGG ACGGTGCCGCTGCCCACGACCCTGCCACCCAGGGGCCCTACCAGCTGCGC GTAAACGCAGGCCTCAGAGCGTGGCACGAGTGGGTCCCCAACCGCCAGTT TCGCGCGCCCGCTGCCTATCAGCGCTTCTACCGCGCGTTCCAGTTTGGGA CGCTCGCAGAGCTGATCATGCTGGACACGCGCTACGACGGCCGAGACAAG TGAGCCTTGCATACCAAAGTTAACCCTGACCCCATAGCCCGAACCCTCAC CTCAACCCTACTGCCTCATACCGGTACACATAGGTCTACTCATGGACAGA CCTCACTCCTTGACGTTTTGTGTGTGCACTTTGGAGTATATGCAGCGAAG CACAGGAGTCAGGCATGGGGGCATGTACGTGGCGTGGGCCTGATACCTGT ACCGTGTGTCCTGACATTAGACATTAGCAGCACACCAGGCCACGCCGTGA GTGTGGCGTTGTGCCTCTGGGATGTCTGCAGCCAGCGCTTGCGTCTGCAT ACGGCTTCAACACTGCTGGTTGGGCATTCCGTCGCGAATTCAAGGCGTCT CGGTGGGGCACCATGTGCATCTGAAGATGAGGTGAAGCAGACACCTTGAT ATGGCGAGCATCAAATCACCGTCCTCATGTTATAGGGTCATGAACATGTG AGATATGTGTAAGTGTGTGTGTGTGTGTGTGTGAGTGTGGGGGATATATG CTATTGCAGAGTTCTGGTCTAATTTGTCACCACCACTGTTGCCCCATGTA CAGATTGCTCGTCAGCTTCGTTCTTCTCAACGAACGCCGCGTGCTCATCA AACCCACTGCAACCACTGCAAATGCAGGCAGGCACCCCAGCCTACATCTG CCGATGACTTTGTTGACTATGCTAAGATCACCGCCACCAACAAGATCATG GGCGATGTTCAGATGGCTTGGATCACCGACAAGCTAGCCACGTCCACTGC GCAGTGGAAGGTCATTGGCAACCAAGTGCCCTTCACTGACACCGTGGACA TCAAGACAGTGGCGGCAAACCCCTTGACCATTGCGCTGATCAACACTGAC TCTTGGGCCGGTGAGTCCTTCAACCCCAACTTCAACGTTAAAACTCAAGT ACATGAGCAGTTCATGGCCCTGCGATGCACCTTTTAGCGCCTTATCAAGG CATTTACGCATTTGCCTGCTAGTCATCTTGGTTCTGTGTCATTGCTTTGC TGGCCGTTTGTATGTTACAGGCTTTAGACCACAGTTTGTTGTGTGTGTAC ATGTTACTACGCTGATAATTACTGATGCTAAGTGGTCAGGTCTTGCTACA GCTTTGATTCACGCATGGCAAGTGGACCACTGCGTAAGGCTTGGGGGACG AATTTGCAATGGCATTGCAATGTCAATGCACACACAGCCTCTGTATTGAT TGCAGACTTGCTGTTTGCAGGATGCCAGTGGGTCATTGTGCAGTAAGCCT CGTGTGTAGGTCCACGCAATTCTGCTGTTGTGTCCCATTTCATTTGCGCT TTCTTGAATGTCAAGCAACTACTTCACTTGTGTGCTGTACATCACGCACT TGTCATGTCTTTATCATCTGTCCCCTTGTGCATCAGCTACACACAAGACA TACGTCATCGTCACCAGTGCCACCTACAGCATGTGACACTCACTCATGTG TAATGAGTGACTCACCGCTCGCGCTGCTCACGTTGCGTGCAGGTTACAAA GCGTCCCAGCAGCAGCTGCTGGCAGCGATGGAAAATGTTCAAGATGTCAT CATCCTGACAGGTATGTATGGACTACGAACATCTGCTTTTCTGGCAACAC TTGTCAAGGTTAAGTGGCAAGTACCCTATGATGCGAACCCCTTGCGCTTT GCAATGAGTGTACACTTGTCAGTACCTTGGTATGCACCAAGTAAGACGAT CTGCCTGCTTTCCATATGCAGCTACTGTGCTCAAGCCTACGCATGATGCA ATCCATGCAGTAAGGGGACATCTGTTGCTTCAAGGAGCTGCACCGTCTTT GAGAGCCCACATGCCATTCTCATCTCATGCTCCCCTCTTTCAACTGCTGG CTGCATATGCCTTACTTCAACCCTAATCCTTCAACCCTAACCCTTGCTAA CGCGCAGGCGACATCCACACGCCGTTCGCGATGCAAGTCTTCCAGAAAGC CAACGGCCAGCCGTACGCCGCAGAGTACGTGACCACCAGCATCACCTCTC CCGGCATTGGCGAATTCGCACAGGACGGCCTGGGCATCGGCCCCGCCATT CAGAACATCATTGTTGACGCAGTTCTCGCAAGCCCAAATGTCGTCAACCT TGAGCTCTTCTGTCACGGCTACCACATCACCACGTACACGGCCACGGAGG TCACAGCACAGTACTACTGCATGGATGACATACACGACCCGACCAACGCC GCGGAGCGCGAGTCGTGGAAGTACGTCACATGCAGCGGCACCAACACCGT GGTGGAGGCTGCGGATGCTGCGTGCTGAGCGGTGTGTGCTGGTGATGAGC GCTGATGACTATGGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAC AGCAGCGGCGGCAGTGGCAACAGCAGCA
back to top

Coding sequence (CDS) from alignment at Contig_94:49275..53952-

>mRNA_7917 ID=mRNA_7917|Name=jgi.p|Trimin1|351561|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1401bp|location=Sequence derived from alignment at Contig_94:49275..53952- (Tribonema minus UTEX_B_3156 )
ATGGTGGACGTGAACGATGTGGATTACACCGTCAAGGTGGATGTCAAACA
ACTGGAGCCCGCAACTGTGTACTACTACCAGTTCAGCGTTGCAAAAGGCG
CAGTGAAAACGGCGGTCGGGCGCACAAAGACACTGCCTGCGGAAGACGCT
GCTGTTGATAAAATAGCCATTGCCTCCGTCAGCTGCGCCTACTACGCATA
TGGAGAGTTCACGGCCTACGGGAAGATTGCTGAGAAGTACGAGGACTTGG
ATATTGTGCTGCACTTGGGCGACTACATCTATGAGTACGGCAACGTCAAC
GGCGCCGACGGCACGGAGTCTGCGCTGTTCAGCAAGGTCCTCCTGGCTCA
GCAGTCGCGCGCGCCCGTGGGCAAGAGCATGCTGCCGCCCACCACGTGCG
TCAGCCTGGAGGACTACCGGCAGCGCTATGCCCTCTACCACACAGATGTC
AACCTGGTCGAGCTGCACAGGGTGCTGCCCTGGATTGTGGTGCCGGATGA
TCACGAGGTCGTTGACAATGGCTATGAGGACGGTGCCGCTGCCCACGACC
CTGCCACCCAGGGGCCCTACCAGCTGCGCGTAAACGCAGGCCTCAGAGCG
TGGCACGAGTGGGTCCCCAACCGCCAGTTTCGCGCGCCCGCTGCCTATCA
GCGCTTCTACCGCGCGTTCCAGTTTGGGACGCTCGCAGAGCTGATCATGC
TGGACACGCGCTACGACGGCCGAGACAAGCAGGCACCCCAGCCTACATCT
GCCGATGACTTTGTTGACTATGCTAAGATCACCGCCACCAACAAGATCAT
GGGCGATGTTCAGATGGCTTGGATCACCGACAAGCTAGCCACGTCCACTG
CGCAGTGGAAGGTCATTGGCAACCAAGTGCCCTTCACTGACACCGTGGAC
ATCAAGACAGTGGCGGCAAACCCCTTGACCATTGCGCTGATCAACACTGA
CTCTTGGGCCGGTTACAAAGCGTCCCAGCAGCAGCTGCTGGCAGCGATGG
AAAATGTTCAAGATGTCATCATCCTGACAGGCGACATCCACACGCCGTTC
GCGATGCAAGTCTTCCAGAAAGCCAACGGCCAGCCGTACGCCGCAGAGTA
CGTGACCACCAGCATCACCTCTCCCGGCATTGGCGAATTCGCACAGGACG
GCCTGGGCATCGGCCCCGCCATTCAGAACATCATTGTTGACGCAGTTCTC
GCAAGCCCAAATGTCGTCAACCTTGAGCTCTTCTGTCACGGCTACCACAT
CACCACGTACACGGCCACGGAGGTCACAGCACAGTACTACTGCATGGATG
ACATACACGACCCGACCAACGCCGCGGAGCGCGAGTCGTGGAAGTACGTC
ACATGCAGCGGCACCAACACCGTGGTGGAGGCTGCGGATGCTGCGTGCTG
A
back to top