mRNA_8003 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|172563
Unique Name	mRNA_8003
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|172563 vs. uniprot
Match: A0A835YHI1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI1_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.010e-57
Identity = 595/595 (100.00%), Postives = 595/595 (100.00%), Query Frame = 1

Query:    1 MVDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGCTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEGGAKCTRVLCFGVPGGKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGAXXXXXXXXXXXXXKATXXXXXXXXXXXXXXXXXXXGVDAXXXXXXXXXXXXXXXEKARTXXXXXXXXXXXXXXXXXXXXXXXXGVAAFGVPGKAAMXXXXXXXXXXXXXXXXXXXXXDEGGVECTRRPTFRMPGXXXXXXXXXXXXXXXXXXQRKQYKTXXXXXXXXXXXXXXXXXGVLGGKATXXXXXXXXXXVDVKHKKXXXXXXXXXXXXXXXXXXMPGDEAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEATHXXXXXXXXXXXXXXXXXTGCTRLASFGVPGSKVPXXXXXXXXXXXXXXXXXXXXGVDEGGVK 1785
            MVDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGCTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEGGAKCTRVLCFGVPGGKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGAXXXXXXXXXXXXXKATXXXXXXXXXXXXXXXXXXXGVDAXXXXXXXXXXXXXXXEKARTXXXXXXXXXXXXXXXXXXXXXXXXGVAAFGVPGKAAMXXXXXXXXXXXXXXXXXXXXXDEGGVECTRRPTFRMPGXXXXXXXXXXXXXXXXXXQRKQYKTXXXXXXXXXXXXXXXXXGVLGGKATXXXXXXXXXXVDVKHKKXXXXXXXXXXXXXXXXXXMPGDEAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEATHXXXXXXXXXXXXXXXXXTGCTRLASFGVPGSKVPXXXXXXXXXXXXXXXXXXXXGVDEGGVK
Sbjct:    1 MVDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGCTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEGGAKCTRVLCFGVPGGKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPTYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGAXXXXXXXXXXXXXKATXXXXXXXXXXXXXXXXXXXGVDAXXXXXXXXXXXXXXXEKARTXXXXXXXXXXXXXXXXXXXXXXXXGVAAFGVPGKAAMXXXXXXXXXXXXXXXXXXXXXDEGGVECTRRPTFRMPGXXXXXXXXXXXXXXXXXXQRKQYKTXXXXXXXXXXXXXXXXXGVLGGKATXXXXXXXXXXVDVKHKKXXXXXXXXXXXXXXXXXXMPGDEAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEATHXXXXXXXXXXXXXXXXXTGCTRLASFGVPGSKVPXXXXXXXXXXXXXXXXXXXXGVDEGGVK 595

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BLAST of jgi.p|Trimin1|172563 vs. uniprot
Match: A0A835YU96_9STRA (EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU96_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.870e-12
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1

Query:    1 MVDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGM 132
            MV+V +KKC+GVDEGG +C+R+PTFGVPGGKA THCAAHK+P M
Sbjct:    1 MVNVTSKKCIGVDEGGAKCTRRPTFGVPGGKADTHCAAHKTPDM 44

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BLAST of jgi.p|Trimin1|172563 vs. uniprot
Match: A0A835ZAZ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.930e-9
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 1

Query:    4 VDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGM 132
            V V+ KKC GVDEGG QC++ P+FGV GGKA THCAAHK+PGM
Sbjct:   24 VGVRYKKCAGVDEGGTQCTKWPSFGVLGGKAATHCAAHKTPGM 66

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BLAST of jgi.p|Trimin1|172563 vs. uniprot
Match: A0A835ZG73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG73_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.110e-9
Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 1

Query:    4 VDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGM 132
            V V+ +KCVGVDEGG QC+++PTFG+PG K  THCAAHK+PGM
Sbjct:   17 VGVRDRKCVGVDEGGTQCTKRPTFGMPGVKVATHCAAHKTPGM 59

[Close]

BLAST of jgi.p|Trimin1|172563 vs. uniprot
Match: A0A835ZA00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA00_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.520e-7
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 1

Query:    4 VDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGM 132
            V  + + C GVDEGG +C +Q TFG+PGGK  THCAAHK+P M
Sbjct:   17 VKFRKRTCAGVDEGGAKCMKQSTFGMPGGKVATHCAAHKTPAM 59

[Close]

BLAST of jgi.p|Trimin1|172563 vs. uniprot
Match: A0A835ZA10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA10_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.260e-5
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 1

Query:   28 VGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGM 132
            VGVDE G +C++QP++ VPGGKA THCAAHK+PGM
Sbjct:  278 VGVDEAGAKCTKQPSYVVPGGKAATHCAAHKTPGM 312

[Close]

BLAST of jgi.p|Trimin1|172563 vs. uniprot
Match: A0A835Z7B4_9STRA (EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B4_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.220e-5
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 1

Query:   25 CVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGM 132
            C G DE G QC++ P+FGV GGK PTHCAAHK+PGM
Sbjct:    2 CAGADERGTQCTKWPSFGVLGGK-PTHCAAHKTPGM 36

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|172563 vs. uniprot

BLAST of jgi.p|Trimin1|172563 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
A0A835YHI1_9STRA	2.010e-57	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YU96_9STRA	3.870e-12	75.00	EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID...	[more]
A0A835ZAZ1_9STRA	1.930e-9	72.09	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZG73_9STRA	5.110e-9	69.77	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZA00_9STRA	4.520e-7	60.47	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZA10_9STRA	1.260e-5	71.43	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z7B4_9STRA	7.220e-5	69.44	EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_94	contig	Contig_94:515609..520910 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|172563\|e_gw1.94.16.1
Hectar predicted targeting category	other localisation
TranscriptId	172885
Track	FilteredModels1
ProteinId	172563

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|172563	gene_8003	Tribonema minus UTEX_B_3156	gene	Contig_94 515609..520910 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|172563	Trimin1\|172563\|e_gw1.94.16.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_94 515609..520910 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8003_1	exon_8003_1	Tribonema minus UTEX_B_3156	exon	Contig_94 515609..515899 +
exon_8003_2	exon_8003_2	Tribonema minus UTEX_B_3156	exon	Contig_94 515920..516408 +
exon_8003_3	exon_8003_3	Tribonema minus UTEX_B_3156	exon	Contig_94 516420..516679 +
exon_8003_4	exon_8003_4	Tribonema minus UTEX_B_3156	exon	Contig_94 516943..517158 +
exon_8003_5	exon_8003_5	Tribonema minus UTEX_B_3156	exon	Contig_94 519982..520381 +
exon_8003_6	exon_8003_6	Tribonema minus UTEX_B_3156	exon	Contig_94 520404..520910 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8003	CDS_8003	Tribonema minus UTEX_B_3156	CDS	Contig_94 515609..515899 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_94:515609..520910+
coding sequence from alignment at Contig_94:515609..520910+

spliced messenger RNA

>mRNA_8003 ID=mRNA_8003|Name=jgi.p|Trimin1|172563|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2163bp|location=Sequence derived from alignment at Contig_94:515609..520910+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCGACGTCAAAACCAAGAAGTGCGTTGGTGTGGACGAGGGGGGCGT
CCAGTGCTCGAGGCAGCCGACCTTTGGCGTGCCCGGGGGTAAGGCCCCCA
CGCACTGCGCCGCGCACAAATCGCCGGGCATGGTCGACGTCAGAAACAAG
CGGTGCGCTGGCGTGGACGAGAGGGGCACCCAGTGCACAAAGTTGCCAAG
CTTCGGCGTGCTCGGAGGGAAGGCCGCCACGCACTGCGCTGCGCACAAGA
CGTCGGGCATGGTCAACGTCACGAACAGGAGGTGCGTCGGCTGCACGAGG
GTGGCGGCATTCGGCGTGCCCGGTGTTAAGACCGCCACGCACTGCGCCGC
GCACAAGACGCCGGGCATGGTCAATGTGAGATACAAGAAGTGCGCTGGAG
TGGGCGAGGGGGGCGCCAAGTGCACGAGGGTACTGTGCTTCGGCGTGCCC
GGGGGTAAGGCCACGCAGTGCGCCGCGCACAAGGAGCCGGGCATGGTCAA
CGTCATTAACAAGCGATGCGCTGGCGTGGACAAGGCGGGCGTCAAGTGCA
CGAGGCACCCGGTCTTCGGCGTGCCCGGGGAAAAGGCCCCCACGTACTGC
GCTGCGCACAAGACGCCGGGCATGGTCAACGTCAAGCGCAAGAAGTGCGC
CGGTGTGGACGAGGGGGGCGTCAAGTGTTCGAGGCAGCCGACTTTTGGCG
TGCCCGGGGGTAAGGCCGCCACGCACTGCGCCGCGCACAAGACGCCGGAC
ATGGTAGATGTCAAAACCAAGAAGTGTTTGGGGGGCGCCAAGTGCACGAG
GGTGCCGTGCTTCGGCGTGCCCGGGGGTAAGGCCACGCACTGCGCTGCGC
ACAAGACGACGGGCATGATCAACGTCATCGACAAGAGGTGCGTCGGCGTG
GACGCGGGTGGCGCCAAGTGCACGAGGATACCGTCCTTCGGCATGCCCGG
GGAAAAGGCCCGCACGCACTGCGCCGCGCACAAGACGCCTGGCATGGTCG
ACGTCAAGCACAAGAAGTGCACCGGTTGTGGTGCCACTGGGGTGGCGGCC
TTCGGCGTGCCAGGTAAGGCCGCCATGCACTGCACTGCACACAAGACGCC
GGGCATGGTCGACGTCAAAAACAAGCGGTGCACCGGCGTGGACGAGGGGG
GCGTCGAGTGCACGAGGCGGCCAACCTTCCGCATGCCCGGGGGTAAGGCC
GCCACGCACTGCTCCGCGCACAAGACGCCGGGCATGGTCACCGTCCAACG
CAAGCAATATAAGACGTGCGCCGGTGTCGACGAGAGGGGCATCCAGTGCG
AAACGTGGCCGAGCTTCGGCGTGCTCGGAGGGAAGGCCACGCACTGCGCT
GCGCACAAGACGCCGGACATGGTCGACGTCAAGCACAAGAAGTGCGCCGG
TGTCGACGAGGCGGGCGTCAATTGCACGAGGCGGCCGAGCTTCGGCATGC
CCGGGGATGAGGCCGCCACGTACTGCGCCGTGCACAAGACGCCGGGCATG
GTCAACGTCACGAACAAGAAGTGCGTCGGTGTGGACGAGGCGGGCGTCAA
GTGCACGAGGCACCCGGTCTTCGGCGTGCCCGGGAATGAGGCCACACACT
GCTCTGCGCACAAGACGCCGGGCATGGTCAATGTCGTGAGCAAGAAGTGC
ACTGGTTGCACGAGGCTGGCGAGCTTCGGCGTGCCCGGGAGTAAGGTTCC
CACGCACTGTGCCGCACACAAGACGCCGGGCATGGTAGACGTAAAGAACA
AGCGGTGTGCTGGTGTCGACGAGGGGGGCGTCAAGTGCACGAAGCGGCCG
ACCTTCCGCATGCCCGGGGGTAAGGTCGCCACGCACTGCGCCACGCACAA
ATCGCCGGGCATGGTTGACGTCAAAAACAAGAAGTGCGTCGGCGTGGACG
AGGCGGGCGCCAAGTGCACGAGGATACCGTCCTTCGGCATGCCCGGGGAA
AAGGCCCCCACGCACTGCGCTGCGCACAAATCGCCGGGCATGGTCAACGT
CAAGCACAAGAAGTGCGCCGGTGTGGACGAGGGGGGCGTCAAGTGCACGA
GGCGGCCGACCTTCCGCGTGCCCGGGGGTAAGGCCACGCACTGCTCCGCG
CACAAGACGGCGGGCATGGTCGACGTCCAAAGCCAGCAGTTCGCAAGGCT
TGAAGGACACTAG

protein sequence of jgi.p|Trimin1|172563

>Trimin1|172563|e_gw1.94.16.1 ID=Trimin1|172563|e_gw1.94.16.1|Name=jgi.p|Trimin1|172563|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=721bp
MVDVKTKKCVGVDEGGVQCSRQPTFGVPGGKAPTHCAAHKSPGMVDVRNK
RCAGVDERGTQCTKLPSFGVLGGKAATHCAAHKTSGMVNVTNRRCVGCTR
VAAFGVPGVKTATHCAAHKTPGMVNVRYKKCAGVGEGGAKCTRVLCFGVP
GGKATQCAAHKEPGMVNVINKRCAGVDKAGVKCTRHPVFGVPGEKAPTYC
AAHKTPGMVNVKRKKCAGVDEGGVKCSRQPTFGVPGGKAATHCAAHKTPD
MVDVKTKKCLGGAKCTRVPCFGVPGGKATHCAAHKTTGMINVIDKRCVGV
DAGGAKCTRIPSFGMPGEKARTHCAAHKTPGMVDVKHKKCTGCGATGVAA
FGVPGKAAMHCTAHKTPGMVDVKNKRCTGVDEGGVECTRRPTFRMPGGKA
ATHCSAHKTPGMVTVQRKQYKTCAGVDERGIQCETWPSFGVLGGKATHCA
AHKTPDMVDVKHKKCAGVDEAGVNCTRRPSFGMPGDEAATYCAVHKTPGM
VNVTNKKCVGVDEAGVKCTRHPVFGVPGNEATHCSAHKTPGMVNVVSKKC
TGCTRLASFGVPGSKVPTHCAAHKTPGMVDVKNKRCAGVDEGGVKCTKRP
TFRMPGGKVATHCATHKSPGMVDVKNKKCVGVDEAGAKCTRIPSFGMPGE
KAPTHCAAHKSPGMVNVKHKKCAGVDEGGVKCTRRPTFRVPGGKATHCSA
HKTAGMVDVQSQQFARLEGH*

mRNA from alignment at Contig_94:515609..520910+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8003 ID=mRNA_8003|Name=jgi.p|Trimin1|172563|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5302bp|location=Sequence derived from alignment at Contig_94:515609..520910+ (Tribonema minus UTEX_B_3156 )
ATGGTCGACGTCAAAACCAAGAAGTGCGTTGGTGTGGACGAGGGGGGCGT
CCAGTGCTCGAGGCAGCCGACCTTTGGCGTGCCCGGGGGTAAGGCCCCCA
CGCACTGCGCCGCGCACAAATCGCCGGGCATGGTCGACGTCAGAAACAAG
CGGTGCGCTGGCGTGGACGAGAGGGGCACCCAGTGCACAAAGTTGCCAAG
CTTCGGCGTGCTCGGAGGGAAGGCCGCCACGCACTGCGCTGCGCACAAGA
CGTCGGGCATGGTCAACGTCACGAACAGGAGGTGCGTCGGCGTGGACGAG
GGGGCGCCAAGTGCACGAGGGTGGCGGCATTCGGCGTGCCCGGTGTTAAG
ACCGCCACGCACTGCGCCGCGCACAAGACGCCGGGCATGGTCAATGTGAG
ATACAAGAAGTGCGCTGGAGTGGGCGAGGGGGGCGCCAAGTGCACGAGGG
TACTGTGCTTCGGCGTGCCCGGGGGTAAGGCCACGCAGTGCGCCGCGCAC
AAGGAGCCGGGCATGGTCAACGTCATTAACAAGCGATGCGCTGGCGTGGA
CAAGGCGGGCGTCAAGTGCACGAGGCACCCGGTCTTCGGCGTGCCCGGGG
AAAAGGCCCCCACGTACTGCGCTGCGCACAAGACGCCGGGCATGGTCAAC
GTCAAGCGCAAGAAGTGCGCCGGTGTGGACGAGGGGGGCGTCAAGTGTTC
GAGGCAGCCGACTTTTGGCGTGCCCGGGGGTAAGGCCGCCACGCACTGCG
CCGCGCACAAGACGCCGGACATGGTAGATGTCAAAACCAAGAAGTGTTTG
GTGTGGACGAGGGGGGCGCCAAGTGCACGAGGGTGCCGTGCTTCGGCGTG
CCCGGGGGTAAGGCCACGCACTGCGCTGCGCACAAGACGACGGGCATGAT
CAACGTCATCGACAAGAGGTGCGTCGGCGTGGACGCGGGTGGCGCCAAGT
GCACGAGGATACCGTCCTTCGGCATGCCCGGGGAAAAGGCCCGCACGCAC
TGCGCCGCGCACAAGACGCCTGGCATGGTCGACGTCAAGCACAAGAAGTG
CACCGGTTGTGGTGCCACTGGGTAGTGTCACCTGCTTCAACTCTCTGTTT
CCTCAGGATTGGGACAGTCTGCTCAGCCAGAGACAGTTCTTGGTTGACGG
TTACAGGAAGTTGAGTTTGGTTGGTTGTTTTCTGTCACTTTGGAGTGAGC
GACAGCCTGATAACACACACACACTTGCTGGAGTGCTGCTGTGGGTGTCA
GTGTGCTGTCTGCTCTGTTTGTCAGTGCTCACGTGCAGTGCAAGCACGTC
ACGGTGTGGACGAGGGGGGCGTCAAGTGCACGAGGGTGGCGGCCTTCGGC
GTGCCAGGTAAGGCCGCCATGCACTGCACTGCACACAAGACGCCGGGCAT
GGTCGACGTCAAAAACAAGCGGTGCACCGGCGTGGACGAGGGGGGCGTCG
AGTGCACGAGGCGGCCAACCTTCCGCATGCCCGGGGGTAAGGCCGCCACG
CACTGCTCCGCGCACAAGACGCCGGGCATGGTCACCGTCCAACGCAAGCA
GTTCGCAACGCTCGAAGGACACTAGGCGCAGTGCTGCTGGAGACACCTCC
TGCCAGTACAAGGGAGCTTGTTTCCCTGCAGGAAAAGTTGAAGGACAGTG
CCCAAGCACTGCATGCATGCTATCAGGTTGCTTGGGGTGCTGACAACTCT
ATTTGCACCCCCCACACCACCTCTCGCCCCCATCGTATACTTTGTGTTTA
GGCCCACAGTGCCGTCGTACACTTCATTGATAATCATTTTCGTCACTGCA
TGGAAACGCTGTACGTCTACCTTTCCTTGGTTGCGTGTTTGTTGCTCCGC
TGCAAGTTGATCTAGTCAATCATGTGTTTGTTGAAACGGGTCATCTCAGG
CATCACTTGTGATGATACCAGCGGCGATCGTGTGCGTGTCGCACATTGCA
TGTCATGTTAGCGCGCACTTATTGTAATTCTCATTTCTACAGAACAAGTT
TTGGAATACAGAGCATCCAGTAAGTGGGAGCGTGTTGAAGATGAAGTTGC
GCCACTCTGGCCATCTCCTTTGGGACTCTCCAAGACATTGGTCCTATGTA
CATATGTTCGGCTGTCTTTATGCAGTTACCACAGCGCGCTGACACGTGTA
CACCACCGAGCTTGCCATTCACGGCAGCAACAAACTCGTGCAGCAGCAGA
TCCCCTGCCCTCGTACTGAGGCATTTTCATATCATGTACTTTGAGGCTCG
CGACGCTCGTCACTTTGCGGGTTCTGCTCAGTATGAACACTCCGACACCT
GAAGCGACCTGCGTTAATAATGCACACAAGCTGCAAGACGCATGCTAACC
CTAATGCGCACGTATTGTAGGGCGCCAGCCCCTCTCCCACCCTACCGCTA
GGTTTGTGAATCAGCTTGCTTACTCACAGTGTGTGTGTCATGCGCCTGTT
ACAGAGGCAGCCTGCTCCGGCGCGCCTCGCGGCAGCTGCAGAGGTGAGAG
AGATCATCTTTTACAGTCCTGCTACCAAGACAGCGCATGAGCGTCGCCAT
TTGCATCGCAGATGCAGATGCATGCACACAGCCATCTGTCGGTGAAGCAG
CACTAACAGCATATATTTTTTGCGTAGCATTCGATTGCTTGTGCGCTGGT
CCATTAGCGTTCTGTTCACAGTCTCTTGCCATGCGTTTGCCGTGTTCTCA
GCCACTGCAGGAGGTTCTCGCGAGCCTGGCACCGACCTCTCGGGTGCCTG
ATGACGAACTCAAATCGACAGTGCAGTGTGCAGCTGCGCTAGCTGGCGCA
AGTCGCAGCACCAGCTTGATGATCAGAGCGCAGCAGGCAGACACGAGCTG
ACAACGGCACAGGCGTGCCTGATGTTGCGGCAAGCCGCATTGTTGGCGGT
GTCGGCCTGCTTGCTGCCCTGTCAGGCTGGTGCGTGCATAGACAAAAGCG
CTGCCACAGCTAGCAGTCGAAACACGTGTGATGCGCCGGCGTCGCCGCAC
GTGTCGGCATCACACATTGCCATCGCATGCGCGTTATAGCAGAAGCGCAC
CTGCCAGGACTGCGGCTCACATGCTCACATGCCGCCCTTGTCGCGCACGT
CGTCATGGCCCATGTGCACCAATTGCAATGGAGGCGCCACTGCTTGCGAT
GCAGGTGCAGCTTTTAGTGCCGTTGCTGTCATGCTCAGTTACACTGATCA
TCTTCAGATGCCTGATTTGAATCATCTATTCATGACATGCATTTCGGATT
GCTGCATAAACAGCGCAGGTGTTTAAAACCCGTGACTTGCATAGTGTCCA
GTAAGAGTTGCTACGGCATCTGTCGGCTCTGGTCCTCTGCTCACTAGCAC
ATGGCAATGGAGAGCATTGGTGGTGTAATGGGGCAAGGGCATTGGCTTTG
CACGTTGTCGCCAGCAAAATACACTTGCTTTCGATAGCGCTCACTCCTGT
CAAGCCCATGGGCAGGATGTCCGAATTGTGGTGCCGCAAAGGCTATGCAA
CTCACGTGTTGGCTGGCGCTGTCAGCTCGAAATTGCGCACGGCCCTCCAC
CAACCGGCGTGTCCCTGTAGAACGGAGACCTCTGCCAGCTGGACACGAAG
TCCTGCTTACCGCAGCCAAGTGTCCTTACAGATTAATTCACTGCTCACAC
GCTGACAGTCCAGAAGGTCCTAGGTGCAGCCGCGCGCGATGCGCCACAGG
CCAATAGGCGTGCGTTCTGAAGGGCCTGCTATCTGTACACCGCTTTGCGT
GTTCACCCTTCCTGATCAGCACGCTTCGCTAGTTTACGTGAAATCCCGCG
CCCACTTCCAACACAGTTGCCGCTTTGCTTCGCCTTCCTGATCACGAGCA
CTCCACGTGAACCCACTTCAAACGCATGTTGAAGTTCAGATGGGGAAAAG
CAATGCGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGA
GAGAGTGCACGATCTAGAGCTATCAGTCTTTCCTCGTCCTCCTGACGACA
AGCTTTTCATTAGTCGTAGAGTGCAGGCTGCAAGCCGACGAACGCATCGA
TGAACTACGCGTTCAGAATAGGCTTTGTTACCGCGGCACGCGTACCGAAG
CCAGCAGCGGTCTTCGCTGCACCTCGCTGTATAGGATGGCAGCGAACGGC
CCTACCAACTGTGATCGTCGCGCCATTCAGGTTGCTGTCAAGCAGTCAGG
GGCGGCCTGTGACCCGGCGAAGAGCCAGGACACCCTCGCTCGTCATGGGC
ACAGATACCCTGGAGCAGCTGGCTCATGCGGCATTGCAAAGAGTGATGGC
CGCAGTGGACAGGATGAAGGCGGACAAAGCAATTTTTTTTCGGCGCCAGA
AACAAGAAGCGCGTCGGCTTCAGATATAAGACGTGCGCCGGTGTCGACGA
GAGGGGCATCCAGTGCGAAACGTGGCCGAGCTTCGGCGTGCTCGGAGGGA
AGGCCACGCACTGCGCTGCGCACAAGACGCCGGACATGGTCGACGTCAAG
CACAAGAAGTGCGCCGGTGTCGACGAGGCGGGCGTCAATTGCACGAGGCG
GCCGAGCTTCGGCATGCCCGGGGATGAGGCCGCCACGTACTGCGCCGTGC
ACAAGACGCCGGGCATGGTCAACGTCACGAACAAGAAGTGCGTCGGTGTG
GACGAGGCGGGCGTCAAGTGCACGAGGCACCCGGTCTTCGGCGTGCCCGG
GAATGAGGCCACACACTGCTCTGCGCACAAGACGCCGGGCATGGTCAATG
TCGTGAGCAAGAAGTGCACTGGTGTGGACGAGAGTGGGCGCCGAGTGCAC
GAGGCTGGCGAGCTTCGGCGTGCCCGGGAGTAAGGTTCCCACGCACTGTG
CCGCACACAAGACGCCGGGCATGGTAGACGTAAAGAACAAGCGGTGTGCT
GGTGTCGACGAGGGGGGCGTCAAGTGCACGAAGCGGCCGACCTTCCGCAT
GCCCGGGGGTAAGGTCGCCACGCACTGCGCCACGCACAAATCGCCGGGCA
TGGTTGACGTCAAAAACAAGAAGTGCGTCGGCGTGGACGAGGCGGGCGCC
AAGTGCACGAGGATACCGTCCTTCGGCATGCCCGGGGAAAAGGCCCCCAC
GCACTGCGCTGCGCACAAATCGCCGGGCATGGTCAACGTCAAGCACAAGA
AGTGCGCCGGTGTGGACGAGGGGGGCGTCAAGTGCACGAGGCGGCCGACC
TTCCGCGTGCCCGGGGGTAAGGCCACGCACTGCTCCGCGCACAAGACGGC
GGGCATGGTCGACGTCCAAAGCCAGCAGTTCGCAAGGCTTGAAGGACACT
AG

Coding sequence (CDS) from alignment at Contig_94:515609..520910+

>mRNA_8003 ID=mRNA_8003|Name=jgi.p|Trimin1|172563|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2163bp|location=Sequence derived from alignment at Contig_94:515609..520910+ (Tribonema minus UTEX_B_3156 )
ATGGTCGACGTCAAAACCAAGAAGTGCGTTGGTGTGGACGAGGGGGGCGT
CCAGTGCTCGAGGCAGCCGACCTTTGGCGTGCCCGGGGGTAAGGCCCCCA
CGCACTGCGCCGCGCACAAATCGCCGGGCATGGTCGACGTCAGAAACAAG
CGGTGCGCTGGCGTGGACGAGAGGGGCACCCAGTGCACAAAGTTGCCAAG
CTTCGGCGTGCTCGGAGGGAAGGCCGCCACGCACTGCGCTGCGCACAAGA
CGTCGGGCATGGTCAACGTCACGAACAGGAGGTGCGTCGGCTGCACGAGG
GTGGCGGCATTCGGCGTGCCCGGTGTTAAGACCGCCACGCACTGCGCCGC
GCACAAGACGCCGGGCATGGTCAATGTGAGATACAAGAAGTGCGCTGGAG
TGGGCGAGGGGGGCGCCAAGTGCACGAGGGTACTGTGCTTCGGCGTGCCC
GGGGGTAAGGCCACGCAGTGCGCCGCGCACAAGGAGCCGGGCATGGTCAA
CGTCATTAACAAGCGATGCGCTGGCGTGGACAAGGCGGGCGTCAAGTGCA
CGAGGCACCCGGTCTTCGGCGTGCCCGGGGAAAAGGCCCCCACGTACTGC
GCTGCGCACAAGACGCCGGGCATGGTCAACGTCAAGCGCAAGAAGTGCGC
CGGTGTGGACGAGGGGGGCGTCAAGTGTTCGAGGCAGCCGACTTTTGGCG
TGCCCGGGGGTAAGGCCGCCACGCACTGCGCCGCGCACAAGACGCCGGAC
ATGGTAGATGTCAAAACCAAGAAGTGTTTGGGGGGCGCCAAGTGCACGAG
GGTGCCGTGCTTCGGCGTGCCCGGGGGTAAGGCCACGCACTGCGCTGCGC
ACAAGACGACGGGCATGATCAACGTCATCGACAAGAGGTGCGTCGGCGTG
GACGCGGGTGGCGCCAAGTGCACGAGGATACCGTCCTTCGGCATGCCCGG
GGAAAAGGCCCGCACGCACTGCGCCGCGCACAAGACGCCTGGCATGGTCG
ACGTCAAGCACAAGAAGTGCACCGGTTGTGGTGCCACTGGGGTGGCGGCC
TTCGGCGTGCCAGGTAAGGCCGCCATGCACTGCACTGCACACAAGACGCC
GGGCATGGTCGACGTCAAAAACAAGCGGTGCACCGGCGTGGACGAGGGGG
GCGTCGAGTGCACGAGGCGGCCAACCTTCCGCATGCCCGGGGGTAAGGCC
GCCACGCACTGCTCCGCGCACAAGACGCCGGGCATGGTCACCGTCCAACG
CAAGCAATATAAGACGTGCGCCGGTGTCGACGAGAGGGGCATCCAGTGCG
AAACGTGGCCGAGCTTCGGCGTGCTCGGAGGGAAGGCCACGCACTGCGCT
GCGCACAAGACGCCGGACATGGTCGACGTCAAGCACAAGAAGTGCGCCGG
TGTCGACGAGGCGGGCGTCAATTGCACGAGGCGGCCGAGCTTCGGCATGC
CCGGGGATGAGGCCGCCACGTACTGCGCCGTGCACAAGACGCCGGGCATG
GTCAACGTCACGAACAAGAAGTGCGTCGGTGTGGACGAGGCGGGCGTCAA
GTGCACGAGGCACCCGGTCTTCGGCGTGCCCGGGAATGAGGCCACACACT
GCTCTGCGCACAAGACGCCGGGCATGGTCAATGTCGTGAGCAAGAAGTGC
ACTGGTTGCACGAGGCTGGCGAGCTTCGGCGTGCCCGGGAGTAAGGTTCC
CACGCACTGTGCCGCACACAAGACGCCGGGCATGGTAGACGTAAAGAACA
AGCGGTGTGCTGGTGTCGACGAGGGGGGCGTCAAGTGCACGAAGCGGCCG
ACCTTCCGCATGCCCGGGGGTAAGGTCGCCACGCACTGCGCCACGCACAA
ATCGCCGGGCATGGTTGACGTCAAAAACAAGAAGTGCGTCGGCGTGGACG
AGGCGGGCGCCAAGTGCACGAGGATACCGTCCTTCGGCATGCCCGGGGAA
AAGGCCCCCACGCACTGCGCTGCGCACAAATCGCCGGGCATGGTCAACGT
CAAGCACAAGAAGTGCGCCGGTGTGGACGAGGGGGGCGTCAAGTGCACGA
GGCGGCCGACCTTCCGCGTGCCCGGGGGTAAGGCCACGCACTGCTCCGCG
CACAAGACGGCGGGCATGGTCGACGTCCAAAGCCAGCAGTTCGCAAGGCT
TGAAGGACACTAG