mRNA_7947 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: A0A835YJY6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY6_9STRA) HSP 1 Score: 614 bits (1584), Expect = 1.680e-221 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 1
Query: 1 RAKLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAARCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFGRAGA 990
RAKLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAARCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFGRAGA
Sbjct: 1 RAKLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAARCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFGRAGA 330
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: D7FSH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH7_ECTSI) HSP 1 Score: 280 bits (716), Expect = 1.260e-81 Identity = 158/358 (44.13%), Postives = 210/358 (58.66%), Query Frame = 1
Query: 7 KLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALA------AAARRAAGT---LPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAARCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYE-QPGSDHADSGGXXXXXXXXXXXAV---------------------THVGIHEIGADGTRTLHRQFMRTADGAILELFGRAG 987
KLRY++ E+ +L WR E+WL V ALW R+Y+H LGQW L A+G PV+ PR +K+ + + FV G FV CF A+ ALA A + G +PE SRFVAAFGV A LDP L+F+VD GNH C+++C DYT+ C C EG++W LY RL+A EGAG++G +T ++YA V + +AL+L+ YLL AHMNGRMLD WRRLN + + F+PHD E+SAAEL+ AC AR+WRGP GARREV D+ D ++GG A THV I+++ D ++LHRQF++T+DG ILE+FG AG
Sbjct: 1262 KLRYIQQEVLLDLHPRGWRVVEYWLAVMVFVGALWLRVYIHALGQWFLLYALGVPVFSFTPRLWEFAIKYMDRSSSLGVEIAFVWWGPTFVMLCFAAVAALARLWGLAACGGKGGGGGEGVPEAFSRFVAAFGVAAGLDPYLLFIVDFMAGNHDCSSKCFDYTSPTCRCHEGDSWKLYVRLDAEEGAGISGALLTVMIYAFVSVTTALILHQYLLHAHMNGRMLDVWRRLNADEDNFFIPHDLELSAAELQHACVRARKWRGPNGARREVVFFDFHVSEEEDGQEAGGATPRSETGRGPAAXXXXXXXXXXXXXXXXGGGKTTHVVIYDVSVDSKKSLHRQFLQTSDGTILEVFGEAG 1619
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: A0A1V9ZG52_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG52_9STRA) HSP 1 Score: 254 bits (650), Expect = 3.840e-74 Identity = 145/326 (44.48%), Postives = 190/326 (58.28%), Query Frame = 1
Query: 7 KLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAA--RCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFG 978
KLRY++ EL +LG W FW+ A + ALW R+Y+HYLGQW YL+ PV+ AP LK+ ST+P+ V + VG +F F L+ LA +R G PE ASRF+A FG+G +LDP+LIFLVD N+ CA+ CAD TAAAC C EG+A+ LYAR EG G+ G +T L+Y +M +A++ Y YLL HMNGRMLD +RR++ +G FVPHDFEVSA E+ C A RW+ GA R+ V +YE D D H+ I + DGTR L+R F++ DG ILE+FG
Sbjct: 561 KLRYLKQELFADLGLSQWSSLHFWIMLAVLLVALWFRVYVHYLGQWIYLRGANVPVFTFAPALTTCVLKYIWSTVPSSVEVVSICVGVLFNMLMFTGLMLLAYVCQRVLGDFPELASRFIACFGLGTVLDPVLIFLVDLLEHNYACASLPECADPTAAACTCSEGDAFKLYARYVISEGTGIVGAVLTLLLYGILMSLAAVLFYTYLLHLHMNGRMLDVYRRVHAREGTFFVPHDFEVSAPEVRRLCDRAGRWKSITGASRKTAVCEYEL--RDPLDPA---------FVEKTVHIAIFTLELDGTRQLYRHFIQNPDGEILEVFG 875
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: A0A3R7WEX6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WEX6_9STRA) HSP 1 Score: 244 bits (624), Expect = 2.380e-73 Identity = 134/326 (41.10%), Postives = 194/326 (59.51%), Query Frame = 1
Query: 7 KLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAA--RCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFG 978
KLRY++ EL ++G +FWL ALW R+Y+HYLGQW YL+AV PV+ P+ V LK+ +T+PTP +G +AVG VF A F+ L+ +A+A ++ G P+ SRF+A FG+ + DP+L+ +D N+ CA+ C D ++++C C EG+A+ LY R ++ EG GV G +T LVY +M +A+V Y YLL HMNGRMLD +RR++ +G FVP+DFEVS A++ A C A RW+ G +R+ V +YE D D H+ I + DG+R L+R F++ DG ILE+FG
Sbjct: 181 KLRYLKQELFADMGFNKATTMQFWLMVVFLCLALWLRVYVHYLGQWLYLRAVNVPVFAFNPQMLTVVLKYTWNTVPTPTEIGVIAVGVVFNIATFIGLMGIASACQKLLGEFPDIGSRFIACFGLATVFDPMLVLAIDLVQHNYDCASIGECKDPSSSSCRCAEGDAFKLYQRFKSEEGTGVVGAVLTLLVYGFLMSVAAVVFYTYLLHFHMNGRMLDVYRRIHAREGVFFVPNDFEVSDADVAALCDRAARWKSMTGTQRKTAVCEYEL--RDPLDPA---------FVETTVHIAIFNLELDGSRQLYRHFIKNPDGEILEVFG 495
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: A0A7S1UH11_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH11_9STRA) HSP 1 Score: 238 bits (607), Expect = 3.070e-71 Identity = 137/328 (41.77%), Postives = 193/328 (58.84%), Query Frame = 1
Query: 1 RAKLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAAR--CA-DYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELF 975
R+KLRY+R E+ +L WR +FW+ ALW RMY+HY+ Q+ +L A+ PVY PR H +TLK+ S++ A +G VA+G + V + +A+ ++ G P++AS+F AA+G+GA+LDP LIFL+D N C R CA DYTA+ C C G+A+ LY R+ G+GV+GV +T +VY + ++LVLY YLL H +GRM D RRL+ ++FVPHDFE+S E+E C A++W+GP G + V+VTDY+ THV IH DG RTL R F+R+ GAI+ELF
Sbjct: 133 RSKLRYIRQEILSDLALRNWRSQDFWVTLWVYCMALWFRMYVHYIAQYLFLMALKVPVYNFGPRLHLMTLKYIMSSINPSAEIGVVAIGPLGVLYLMICFMAIGRLCQQLIGHFPDFASKFCAAYGLGAVLDPALIFLIDVASRNFNCEDRPECAEDYTASKCECFTGDAFKLYDRMADTNGSGVSGVLVTFMVYTFTVALASLVLYNYLLYIHFDGRMRDVHRRLHQVSAEIFVPHDFEMSLKEVEYICRKAKKWQGPHGETKRVSVTDYD-----------LTDPSAPKFRETTTHVAIHTHTLDGHRTLWRHFLRSPSGAIIELF 449
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: A0A7S3XI52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XI52_HETAK) HSP 1 Score: 234 bits (598), Expect = 5.070e-71 Identity = 142/333 (42.64%), Postives = 184/333 (55.26%), Query Frame = 1
Query: 4 AKLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCA---ARCA-DYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFGRAGA 990
+KLRY+R E+ +L WR AE W+ A W RMYLHY+GQ+ YL A+ PVY A H +TLK+ S++ +G + VG + F + + G LP+ S+F+AA+G +LDP LI LVD N+ C CA DYTA C C EG+AW L+ RLEA E AGV+G F+T ++YA + S LYAYLL HMNGRMLD +RRL G FVPHDFE+ AE+ A+RW GP G RR+V V++YE THV I++ +G RTL R F+R DGA+LELF GA
Sbjct: 50 SKLRYIRQEVVSDLALANWRSAEMWITLFIYAVAFWIRMYLHYIGQYLYLLALDVPVYGFAAHWHIMTLKYVFSSVTLGVEIGLILVGPLANLLVFGFFSLVGHSVNGLTGALPDNISKFLAAYGAATVLDPALICLVDLLARNYYCTDYYPACAEDYTANDCTCFEGDAWKLWVRLEAEESAGVSGGFLTLILYAGLTFVSFGALYAYLLHVHMNGRMLDVYRRLTGDSSCFFVPHDFELPLAEVNFIADKAKRWLGPRGERRQVAVSEYE-----------LRDPLLLGFRETTTHVAIYQTDLEGGRTLWRHFLRAGDGAVLELFDDLGA 371
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: W4HBU1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HBU1_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.190e-70 Identity = 134/326 (41.10%), Postives = 194/326 (59.51%), Query Frame = 1
Query: 7 KLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAA--RCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFG 978
KLRY++ EL ++G +FWL ALW R+Y+HYLGQW YL+AV PV+ P+ V LK+ +T+PTP +G +AVG VF A F+ L+ +A+A ++ G P+ SRF+A FG+ + DP+L+ +D N+ CA+ C D ++++C C EG+A+ LY R ++ EG GV G +T LVY +M +A+V Y YLL HMNGRMLD +RR++ +G FVP+DFEVS A++ A C A RW+ G +R+ V +YE D D H+ I + DG+R L+R F++ DG ILE+FG
Sbjct: 605 KLRYLKQELFADMGFNKATTMQFWLMVVFLCLALWLRVYVHYLGQWLYLRAVNVPVFAFNPQMLTVVLKYTWNTVPTPTEIGVIAVGVVFNIATFIGLMGIASACQKLLGEFPDIGSRFIACFGLATVFDPMLVLAIDLVQHNYDCASIGECKDPSSSSCRCAEGDAFKLYQRFKSEEGTGVVGAVLTLLVYGFLMSVAAVVFYTYLLHFHMNGRMLDVYRRIHAREGVFFVPNDFEVSDADVAALCDRAARWKSMTGTQRKTAVCEYEL--RDPLDPA---------FVETTVHIAIFNLELDGSRQLYRHFIKNPDGEILEVFG 919
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: A0A024UTC0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTC0_9STRA) HSP 1 Score: 244 bits (623), Expect = 3.480e-70 Identity = 135/326 (41.41%), Postives = 196/326 (60.12%), Query Frame = 1
Query: 7 KLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAA--RCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFG 978
KLRY++ EL ++G +FWL ALW R+Y+HYLGQW YL+AV PV+ +P+ V LK+ +T+PT +G +AVG VF F+ L+ +A+A++R G P+ SRF+A FG+G +LDP+L+F +D N+ CA+ C D ++++C C EG+A+ LY R ++ EG GV G +T LVY +M +A+V Y YLL HMNGRMLD +RR++ +G FVP+DFEVS A++ C A RW+ G +R+ V +YE D D H+ I + DG+R L+R F++ DG ILE+FG
Sbjct: 582 KLRYLKQELFADMGLNKAGTLQFWLMVIFLCMALWLRLYVHYLGQWLYLRAVNVPVFAFSPQLVTVVLKYTWNTVPTSTEIGVIAVGVVFNVLTFLGLMGIASASQRFLGEFPDIGSRFIACFGLGTVLDPVLVFAIDLLHHNYDCASLGTCTDPSSSSCKCSEGDAFKLYQRFKSEEGTGVVGAVLTLLVYGFLMGVAAVVFYTYLLHFHMNGRMLDVYRRIHAREGMYFVPNDFEVSNADVTVLCDKAARWKSMTGTQRKTAVCEYEL--RDPLDPS---------FVETTVHIAIFNLELDGSRQLYRHFIKNPDGEILEVFG 896
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: G4ZYM8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZYM8_PHYSP) HSP 1 Score: 228 bits (581), Expect = 1.170e-68 Identity = 133/333 (39.94%), Postives = 190/333 (57.06%), Query Frame = 1
Query: 1 RAKLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCA--ARCA-DYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFGRAGA 990
R K+ Y++ EL +LG W EFW A + A W R+Y+HYL QW +L+ PVY PR +K+ T+ T +G +++G + T FV L AA +R G LP + S FVA G+ +LDP L+ +VD ++GC+ + CA TA+ C C G+ + LY R +A+EG+G+ G+FI ++Y + S + LY YLL HMNGRMLD +RR++G + FVPHD E+S EL+ CA A RW+GP G +R+V V +Y SD D TH+ ++ + DG+R LHR F++ DGA+LELFG GA
Sbjct: 12 RRKMHYLKHELLVDLGFTNWHTLEFWRLVAMLMFACWIRLYVHYLTQWLFLRGNRVPVYDFQPRWTTCIVKYTWQTVATHIEIGLLSLGVLGNTMMFVFLSGAAAVGQRYVGDLPAFGSNFVACAGIATVLDPFLVLIVDMLSHHYGCSQLSECAVSLTASGCTCVTGDWFKLYVRFQAQEGSGLVGIFIVLILYVALTCLSLVGLYIYLLYIHMNGRMLDVYRRVHGHEDSFFVPHDAEISLQELQTVCAQATRWKGPRGTQRKVFVHEYAL--SDPLDP---------LFRETNTHIAVYNVELDGSRELHRHFLKMPDGAVLELFGELGA 333
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Match: A0A418BA73_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BA73_9STRA) HSP 1 Score: 235 bits (600), Expect = 2.900e-68 Identity = 128/305 (41.97%), Postives = 185/305 (60.66%), Query Frame = 1
Query: 70 EFWLGGAAAVAALWTRMYLHYLGQWAYLKAVGAPVYLLAPRTHYVTLKFASSTLPTPAMVGFVAVGAVFVTACFVALVALAAAARRAAGTLPEWASRFVAAFGVGALLDPLLIFLVDACVGNHGCAA--RCADYTAAACACQEGEAWALYARLEAREGAGVTGVFITALVYAQVMLASALVLYAYLLRAHMNGRMLDAWRRLNGADGDVFVPHDFEVSAAELEAACAAARRWRGPVGARREVTVTDYEQPGSDHADSGGXXXXXXXXXXXAVTHVGIHEIGADGTRTLHRQFMRTADGAILELFG 978
+FWL ALW R+Y+HYLGQW YL+AV PV+ +P+ V LK+ +T+PT +G +AVG VF F+ L+ +A+A++R G P+ SRF+A FG+G +LDP+L+F +D N+ CA+ C D ++++C C EG+A+ LY R ++ EG GV G +T LVY +M +A+V Y YLL HMNGRMLD +RR++ +G FVP+DFEVS A++ C A RW+ G +R+ V +YE D D H+ I + DG+R L+R F++ DG ILE+FG
Sbjct: 375 QFWLMVIFLCMALWLRLYVHYLGQWLYLRAVNVPVFAFSPQLVTVVLKYTWNTVPTSTEIGVIAVGVVFNVLTFLGLMGIASASQRFLGEFPDIGSRFIACFGLGTVLDPVLVFAIDLLHHNYDCASLGTCTDPSSSSCKCSEGDAFKLYQRFKSEEGTGVVGAVLTLLVYGFLMGVAAVVFYTYLLHFHMNGRMLDVYRRIHAREGMYFVPNDFEVSNADVTVLCDKAARWKSMTGTQRKTAVCEYEL--RDPLDPS---------FVETTVHIAIFNLELDGSRQLYRHFIKNPDGEILEVFG 668 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153545 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7947 ID=mRNA_7947|Name=jgi.p|Trimin1|153545|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_94:171144..172133- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGCGCCAAGCTGCGCTACGTGCGCGCGGAGCTCGGGCCGGAGCTCGGCGGback to top protein sequence of jgi.p|Trimin1|153545 >Trimin1|153545|gw1.94.158.1 ID=Trimin1|153545|gw1.94.158.1|Name=jgi.p|Trimin1|153545|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp RAKLRYVRAELGPELGGGAWREAEFWLGGAAAVAALWTRMYLHYLGQWAYback to top mRNA from alignment at Contig_94:171144..172133- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7947 ID=mRNA_7947|Name=jgi.p|Trimin1|153545|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_94:171144..172133- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_94:171144..172133- >mRNA_7947 ID=mRNA_7947|Name=jgi.p|Trimin1|153545|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_94:171144..172133- (Tribonema minus UTEX_B_3156 )back to top |