Trimin1|100003|CE100002_3409 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|100003
Unique NameTrimin1|100003|CE100002_3409
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length137
Homology
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: A0A835YGQ7_9STRA (Ribosomal protein L32e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGQ7_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.430e-90
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136
            MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA
Sbjct:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: D8LTG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTG6_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 2.330e-71
Identity = 107/136 (78.68%), Postives = 124/136 (91.18%), Query Frame = 0
Query:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136
            M   +PL K  VVKKRTKKFARHQ++RF+RI+NSSWR+PKGIDGRVRR+FKG +PMPN+GYGS+K+TRN+LPNGFYKFLVHNVK+LELL+MHNRKYAAEIAHNVS+RKRKEIVERA QL I+VTNA A+L  EEDA
Sbjct:    1 MGGVQPLNKVNVVKKRTKKFARHQTDRFMRIKNSSWRKPKGIDGRVRRRFKGCLPMPNVGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 136          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: A0A6S9KJY2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KJY2_HETAK)

HSP 1 Score: 207 bits (527), Expect = 8.700e-67
Identity = 105/135 (77.78%), Postives = 117/135 (86.67%), Query Frame = 0
Query:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEED 135
            MA   PL KP +VKKRTKKFARHQS++F+RI  SSWR+PKGID RVRR+FKG IPMP IGYGSNKKTRNVLPNGF KFLV+NV +LELLMMHNRKY AEIAHNVSA+KRK+IV RA QL I+VTNANARL  +ED
Sbjct:    1 MAKITPLSKPKIVKKRTKKFARHQSDQFMRIGKSSWRKPKGIDSRVRRRFKGTIPMPKIGYGSNKKTRNVLPNGFLKFLVNNVAELELLMMHNRKYCAEIAHNVSAKKRKDIVTRAEQLGIRVTNANARLEAQED 135          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: A0A7S2XAB1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XAB1_9EUKA)

HSP 1 Score: 204 bits (520), Expect = 6.020e-66
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0
Query:   17 TKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEED 135
            TKKFARHQS+RF RI +SSWRRPKGID RVRRKFKGAIPM N+GYGSNKKTRN+LPNGFYKFLVHNVK+LELLMMHNRKY AE+AH VS++KRKEIVERA QL IKVTNANA+LR EED
Sbjct:    1 TKKFARHQSDRFKRIADSSWRRPKGIDSRVRRKFKGAIPMANVGYGSNKKTRNLLPNGFYKFLVHNVKELELLMMHNRKYCAEVAHAVSSKKRKEIVERADQLGIKVTNANAKLRAEED 119          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: A0A7S2B874_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B874_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.430e-64
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 0
Query:    6 PLPKPA-VVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136
            PL KP  +VKKRTKKFARH SNRF+RIENSSWR+PKGID  VRR+FKG IPM  IGYGS+KKTRN++PNGFYKF V NV  LE+LMMHNRKY AEIAHNVS +KRKEIVERA+QL IKV+NANA+LR++EDA
Sbjct:   24 PLVKPKKIVKKRTKKFARHFSNRFMRIENSSWRKPKGIDSSVRRRFKGTIPMAKIGYGSDKKTRNLMPNGFYKFAVSNVDQLEMLMMHNRKYCAEIAHNVSTKKRKEIVERAAQLNIKVSNANAKLRSDEDA 155          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: A0A7S2SH78_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH78_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.960e-63
Identity = 98/131 (74.81%), Postives = 113/131 (86.26%), Query Frame = 0
Query:    6 PLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136
            PL KP VVKKRTKKF RH SNRF+RI  +SWR+P GID  +RR+FKG++P P +GYGS+K+TRN+LPNGFYKFLV NV+DLELLMMHNRKY AEIAHNVS  KR+EIV RA+QL IKVTNANA+LR EEDA
Sbjct:    6 PLTKPKVVKKRTKKFVRHFSNRFMRISRTSWRKPMGIDSSMRRRFKGSLPQPKVGYGSDKRTRNLLPNGFYKFLVSNVEDLELLMMHNRKYCAEIAHNVSTLKRQEIVTRANQLAIKVTNANAKLREEEDA 136          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: B7G3G9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3G9_PHATC)

HSP 1 Score: 196 bits (497), Expect = 3.230e-62
Identity = 97/136 (71.32%), Postives = 118/136 (86.76%), Query Frame = 0
Query:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136
            MA P PL K  +VKKRTKKFARHQS+ F+RI NSSWR+PKGIDGRVRR+FKG+IPMP+IGYGS+K+TRNV P+GF   +++NV +LE+LMMHNR YAA +AH+VS+R R+EIVERA QL I+VTNANA+LR EEDA
Sbjct:    1 MAGPTPLNKKTIVKKRTKKFARHQSDLFLRIANSSWRKPKGIDGRVRRRFKGSIPMPSIGYGSDKQTRNVHPHGFKTVVINNVSELEMLMMHNRTYAATVAHSVSSRIRREIVERAEQLAIRVTNANAKLRAEEDA 136          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: F0XYA0_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYA0_AURAN)

HSP 1 Score: 194 bits (494), Expect = 8.970e-62
Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0
Query:    7 LPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEE 134
            + KP +VKKRTKKFARH SNRF++I NSSWR+  GID RVRR+FKG IPMP IGYGS+KKTR+++P+GFYKF+V+NVK+LELLMMHNR YAAEIAH+VS +KRK I+ERA QL IKVTNANARLR EE
Sbjct:    7 MSKPTIVKKRTKKFARHFSNRFMKIRNSSWRKIHGIDSRVRRRFKGTIPMPKIGYGSDKKTRHMMPSGFYKFVVNNVKELELLMMHNRTYAAEIAHSVSGQKRKAIIERAEQLNIKVTNANARLRAEE 134          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: A0A1E7FQF0_9STRA (Ribosomal protein L32e n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FQF0_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.320e-61
Identity = 95/136 (69.85%), Postives = 117/136 (86.03%), Query Frame = 0
Query:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136
            MA P P+ K  +VKKRTKKFARHQS++F+RI +SSWR+PKGIDGRVRR+FKGA+PMP+IGYGS+K TRN+ PNGF   +V+NV +LE+LMMHNR YAA +AH+VS+R RKEIV+RA QL I+VTNA A+LR EEDA
Sbjct:    1 MAGPTPINKKTIVKKRTKKFARHQSDQFMRIRDSSWRKPKGIDGRVRRRFKGAVPMPSIGYGSDKATRNICPNGFKSVVVNNVSELEMLMMHNRTYAATVAHSVSSRIRKEIVQRAEQLAIRVTNAAAKLRAEEDA 136          
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Match: A0A6U0EGG2_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U0EGG2_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.650e-61
Identity = 96/136 (70.59%), Postives = 117/136 (86.03%), Query Frame = 0
Query:    1 MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKFKGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEIAHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA 136
            MA P PL K  +VKKRTKKFARHQS++FIRI +SSWR+PKGIDGRVRR+FKGA+PMP++GYGS+KKTRN+ P+GF   +V NV +LE+LMMHNR YAA IAH+VS+R R++IVERA QL +KVTNA A+LR EEDA
Sbjct:    1 MANPTPLNKKTIVKKRTKKFARHQSDQFIRIRDSSWRKPKGIDGRVRRRFKGALPMPSVGYGSDKKTRNIHPHGFKTVVVSNVSELEMLMMHNRTYAATIAHSVSSRVRRQIVERAEQLSVKVTNAAAKLRAEEDA 136          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|100003 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YGQ7_9STRA1.430e-90100.00Ribosomal protein L32e n=1 Tax=Tribonema minus Tax... [more]
D8LTG6_ECTSI2.330e-7178.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9KJY2_HETAK8.700e-6777.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XAB1_9EUKA6.020e-6684.87Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2B874_9STRA4.430e-6477.27Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2SH78_9STRA1.960e-6374.81Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
B7G3G9_PHATC3.230e-6271.32Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
F0XYA0_AURAN8.970e-6275.00Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A1E7FQF0_9STRA1.320e-6169.85Ribosomal protein L32e n=3 Tax=Bacillariaceae TaxI... [more]
A0A6U0EGG2_9STRA2.650e-6170.59Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 17..125
e-value: 5.8E-73
score: 258.4
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 17..125
e-value: 6.1E-51
score: 171.3
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 6..135
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 18..125
e-value: 1.48606E-59
score: 177.337
IPR018263Ribosomal protein L32e, conserved sitePROSITEPS00580RIBOSOMAL_L32Ecoord: 20..41
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 2..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:148864..150266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|100003mRNA_7941Tribonema minus UTEX_B_3156 mRNAContig_94 148846..150322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|100003|CE100002_3409 ID=Trimin1|100003|CE100002_3409|Name=jgi.p|Trimin1|100003|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
MAAPKPLPKPAVVKKRTKKFARHQSNRFIRIENSSWRRPKGIDGRVRRKF
KGAIPMPNIGYGSNKKTRNVLPNGFYKFLVHNVKDLELLMMHNRKYAAEI
AHNVSARKRKEIVERASQLFIKVTNANARLRTEEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR018263Ribosomal_L32e_CS
IPR036351Ribosomal_L32e_sf