mRNA_12055 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351551
Unique Name	mRNA_12055
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A835YRS7_9STRA (TAF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS7_9STRA)

HSP 1 Score: 898 bits (2321), Expect = 0.000e+0
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 1

Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAVKEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAPLLLF 1512
            MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAVKEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAPLLLF
Sbjct:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAVKEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAPLLLF 504

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A6H5KPB7_9PHAE (TAF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPB7_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.350e-42
Identity = 140/398 (35.18%), Postives = 195/398 (48.99%), Query Frame = 1

Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP--------SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSD--RSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEI-----MPAAMTVLLCATL---GPDTD--IDSD------------------HWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLG 1080
            ++S  ++  + AA  VG VS DV  FL++SAEYHL D++ +A     R KR R+T DDV  +LE+R  E       +++V A             + +  DSAT D +V+  +VANA LP CP+EP   +HWLAVDG+QP +PQNP         +  XXXXXXXXX         +      LSEE   YL R  +A+L   +  RS  L     SL+ DPGLQ++LPH+C FI+ +    +K                   QL AL++  +C+L N +F  +EI     +P  M+ LL       GPD     +SD                  HW +RD  A ++  +C ++G  +P LQA    M    + R     T L TLYGA+ GV  LG
Sbjct:    8 LVSHDSLRIITAAAQVGEVSEDVLSFLSASAEYHLLDVINDASNFRARGKRSRLTVDDVTASLELRGAE-------TSLVCA--------GGGSKSKDSDDSATADGKVDLRKVANATLPVCPIEPGFHMHWLAVDGQQPLLPQNPLPSSGRGKGKSXXXXXXXXXXXXXXXXXXXSSAVRARLSEELTTYLRRCCDAILSRDEPKRSRALA----SLREDPGLQQLLPHLCTFIQTKVPEYLKRQKEPD-------------QLAALLQMLQCLLNNKNFAFLEIYLDRLLPPLMSCLLHIDFERAGPDNGGAANSDYSSFGGIGVHSAARPKWTHWDVRDYAAELLRAICDKHGNTYPTLQARANDMFDTHVARPK---TRLTTLYGAITGVACLG 370

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A6A5C846_NAEFO (TAF domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C846_NAEFO)

HSP 1 Score: 167 bits (423), Expect = 5.090e-42
Identity = 127/441 (28.80%), Postives = 210/441 (47.62%), Query Frame = 1

Query:   10 RQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPS---------RQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPV-FDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFH-EM---EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSA---AVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQ--------QQER 1257
            ++ +  +A +L +  + +D+A+ LA   EY +++++Q+A K  R SKR+ +T DDVN+AL M+++E LYG+R  +   +                       D  ++  +     LPK P+ P+   HWLA+ G QP+IPQNPS         + +           +   +   P  +  LSEE Q Y ++V +A+   S++   L     +SL  DPG+ +++P+  +FI       ++                 L  LY LM   + +L+N + H E+   ++MP+ +T ++  TL  + +   +HW+LRD +A I+AY+CR++G ++  LQ  +   L  A        T   T YGA+VG+  LG H+    LL L  P  ++L      +   L S D+  R  A  C   L  AAG+F  Q        QQER
Sbjct:   11 KETVQVIAQSLGINKLKDDIAQTLALDVEYRIREIIQDASKFMRHSKRKLLTTDDVNHALSMKNIEPLYGFRGQSSQPSRFRRVKQTKDLYF--------LEDVELDLKDCLEKPLPKVPIGPSIFTHWLAIQGIQPKIPQNPSIEDTESDRKKPKEKDQSKKVSTSQDPNVEFKPLVKHVLSEELQMYYEKVTDAIKDLSNQKRDLRKAAIESLANDPGINQLIPYFTQFIASEVTNNLRN----------------LTLLYRLMEMTKALLVNPNIHIELYLHQLMPSILTCIVGKTLCENPN--DNHWSLRDFSANIIAYICRKFGSSYHTLQPRITKTLLHAFLDPKRSRT---THYGAIVGITALGSHV--TQLLFLEPPKNSNLKIFCNLLLPELVSPDMHTRHNAFMCFKALLTAAGTFFTQLSRFFKLEQQER 420

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: D8RG19_SELML (TAF domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RG19_SELML)

HSP 1 Score: 164 bits (416), Expect = 2.680e-41
Identity = 128/424 (30.19%), Postives = 204/424 (48.11%), Query Frame = 1

Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQN---------PSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGS 1233
            ++ ++ I  +A ++ +  + +DVA  LA   EY +++++QEA+K  R SKR  +T DDVN AL +R+VE LYG+ +                    G        DR ++  E+  A L K P++   M HWLA++G QP IP+N         P  ++            +D+       +  LS E Q Y +++ E ++  +D    L  VF SL  D GL  ++P+  +FI +                    G + L  L++LMR AR +LLN H H      ++MP+ +T L+   LG    ++  HW LRD TA ++A++C+R+G A+ NLQ  V   L  A    D K  A+   YGA+ G+  LG  ++  ++LP L  +  +L      S    +  +R EA+R    L  AAG+
Sbjct:    3 IVPKETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDDVNTALSLRNVEPLYGFASG----------DPLRFRRAVGHSDLFFIDDRELDCKEITEAPLTKAPLDTAVMAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLKLPV---KHVLSRELQLYFEKITELIVTGAD-DVLLKDVFASLATDSGLHPLVPYFTQFIADEVTR----------------GLNDLPLLFSLMRVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVN--HWELRDFTATLIAFICKRFGHAYYNLQTRVTKTLLHAFL--DPK-RAMTQHYGAVKGIAALGSKLVRLLILPNLE-VYINLLLPEMSSQDQANELKRYEAIRVYGALQAAAGN 390

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A1Y1VM90_9FUNG (DUF1546-domain-containing protein n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VM90_9FUNG)

HSP 1 Score: 162 bits (410), Expect = 6.270e-41
Identity = 121/391 (30.95%), Postives = 196/391 (50.13%), Query Frame = 1

Query:   55 VSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGE---QELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARR-EEALRC 1203
            VS+  A+ LA   EY ++++ +EA K  R S R  +T  D+NYAL +R+VE +YG  +   +                G+D   A  D  ++  ++ N  LP  P++ T   HWLA++G QP IPQNPS Q+           ++ + +   + +     LS+E + Y +++ E+V+ SSD +     VFDSLK+DPG+ +++P+  +FI E                     R  L  L+++M+    +L N H +      ++MP+ +T ++   LG       DHW LRD  A +VA +C+++G A+  LQ  V   L  A+      G    T YGA++G+  LG  +I  ++LP+++P     SA +   +KSG    R EEA RC
Sbjct:   24 VSDSAAKLLAQDVEYRIREIAEEARKFMRHSHRDILTTSDINYALRVRNVEPMYGLNSKEEL----------RFQPIVGQDIYYAD-DEELSLDDLINTLLPPVPLDVTFTGHWLAIEGVQPAIPQNPSPQEIEILKKQASNDKLLLQQDKSSNDIVQNMLSKELRIYYEKLTESVV-SSDETLQQA-VFDSLKQDPGIHQLVPYFVKFIIENVTK----------------NRKNLQVLWSVMKMIGSLLENTHIYMEPYLHQLMPSILTCVVTKHLGEKAS--EDHWALRDYAASLVALICKQFGSAYHTLQPRVSKTLLHAIMDP---GKPFTTSYGAIIGLSLLGEEVIRVLILPIIKPF----SARIENEIKSGSKPSRIEEAKRC 376

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A1Y1HNQ6_KLENI (Transcription initiation factor TFIID subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HNQ6_KLENI)

HSP 1 Score: 163 bits (413), Expect = 1.540e-40
Identity = 126/426 (29.58%), Postives = 203/426 (47.65%), Query Frame = 1

Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP----------SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHE----MEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVV-LMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGS 1233
            ++S+ +I   A +L +  + ++VA+ LA   EY ++++ QEA+K  R SKR  +T DDVN AL +R+VE LYG+ +                    G        D+ ++  E+ +A LPK P++ T + HWLAVDG QP I +NP           +++         A E   +   P  +  +S+E Q Y +++ E V   +D S  L     SL  D G+  ++P+  +FI++  Q  +                H L  L+ LMR A  +L N H H      +++P+ +T L+   LG   +    HW LRD +A IVA +C RYG ++ N+Q  +   ++   L  K       P  YG++ G++ LG  ++  ++LP L      L   +    K  D  RR EA R   +L +AAG+
Sbjct:    3 LVSKNSIQVAAQSLGIPNLGDEVAQALAPDVEYRIREICQEAIKCMRHSKRSTLTTDDVNSALSLRNVEPLYGFSSD----------DPLRFRKALGHSDLFYLDDKELDFSEIIDAPLPKPPIDTTVIAHWLAVDGVQPAIQENPPPGAELTLPTEQKKKIEGQPGLGAPEDLPVEVKPAVKHVISKELQLYFEKIMELVTSGTD-SKLLNDAVRSLASDSGIHPLVPYFIQFIQDEVQRSL----------------HDLPLLFTLMRVAEALLANPHVHIEGYLQQLIPSVVTCLVARRLGGRKN-GYRHWDLRDFSATIVATICHRYGHSYSNIQPRLTKTLVNSFLNPKQ----TYPQHYGSIKGLVALGNRVVRLLVLPNLATYLELLREDLDPQ-KQKDEVRRYEAQRVYGLLQVAAGN 395

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A485KP26_9STRA (Aste57867_9761 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KP26_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.830e-40
Identity = 125/423 (29.55%), Postives = 206/423 (48.70%), Query Frame = 1

Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP---SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLND----HFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQ 1248
            ++  ++IA +A ++ +  +S   A  LA   E+ L++++Q+AMK    ++R R+T  D+N+AL  R++E LYGY A                       G   T D  V   ++ NA LP CP+EP+  +HWLAV+G QP+IP+N    S            A   DV R  P  +  L++E Q Y ++V EA+   +D        F SL +DPGL ++LP+  +FI +                  K  +  L  L +++R ARC+L N       +  +++P+ +T +L   L  +     DHW +R   A ++A +C+R+G ++ N+Q  V     +A        T   T YGA+VG + LG  ++  +L P +    A L   ++ +  + ++ +R EAL CV +L  AAG +   Q
Sbjct:    3 VLREESIAVIAQSIGLDNLSKGCAAELAPEIEFRLREIIQDAMKFKSHARRDRLTTKDINHALSTRNMEILYGYGAGTGNVTFRKI-----------SPGLYVTDDPEVPVADILNAPLPVCPLEPSVHMHWLAVEGVQPKIPENDVDDSSTATYITSISDPAFTGDVQR-KPLVKHVLTDEMQLYYEKVTEAI--KADDFNRQQAAFASLTKDPGLHQLLPYFSKFIYDEV----------------KNSQRDLVLLTSILRMARCLLSNQSLRIELYLEQLIPSILTCVLNRQLCENPA--DDHWAVRKSAAHLMAQICQRFGDSYENIQLRVSKTYHDAFLDPTRPFT---TQYGAIVGCLYLGPLVMETLLFPHVASYLARLEPTMSPT--NPNLVQRLEALHCVGILQHAAGQYMAMQ 388

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A7J7C9A9_TRIWF (Transcription initiation factor TFIID subunit 6 isoform X1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C9A9_TRIWF)

HSP 1 Score: 162 bits (411), Expect = 3.190e-40
Identity = 127/416 (30.53%), Postives = 198/416 (47.60%), Query Frame = 1

Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXA--GEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAG 1230
            ++ ++ I  +A ++ +  +S DVA  LA   EY +++++QEA+K  R S+R  +TADDV+ AL +R+VE +YG+ +                   AG        D+ V   +V  A LPK P++ +  +HWLA+DG QP IP+N   +             G + V    P  +  LS E Q Y D++ E  ++  D S        SL  D GL  ++P+   FI +     +                    +L+ALMR AR +LLN H H      ++MP+ +T L+   LG    I  +HW LR+  A +VA +C+R+G  + NLQ+ V   L  AL        +LP  YGA+ G+  LG  ++  ++LP L P    L   +    +  ++ +R EA R    L  AAG
Sbjct:    3 IVQKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSRRTTLTADDVDSALNLRNVEPIYGFASG----------DNLRFKRAAGHKDLFYVDDKDVEFTDVMEAPLPKAPLDTSIAVHWLAIDGVQPLIPENAPVEALSDGKISEYKEDGGLPVDVKLPV-KHVLSRELQLYFDKITELTVKRPD-SVVFKQALVSLATDSGLHPLVPYFTCFIADEVTRNLSNFP----------------RLFALMRVARSLLLNPHIHIEPYLHQLMPSIITCLVAKWLG--NRISDNHWELRNFAANLVASICKRFGHVYHNLQSRVTKTLLHALLDAT---KSLPQHYGAIQGLAALGPSVVRPLILPNLEPYLQLLEPEMLLERQKNEM-KRHEAWRVYGALIYAAG 384

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A2I0L9T5_PUNGR (TAF domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0L9T5_PUNGR)

HSP 1 Score: 158 bits (399), Expect = 3.210e-40
Identity = 113/367 (30.79%), Postives = 180/367 (49.05%), Query Frame = 1

Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQ---LYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLG 1080
            ++ ++AI  +A ++ +  +S DVA  +A + EY L++++QEA+K  R S+R  +T++DV+ A ++R+VE +YG+ +                   AG        ++ V   +V +A LPK P+E     HWLA++G QP IP+NPS +             I +    P  +  +S E Q Y D+++E  L  SD S        SL  D GL  ++P+I  FI +                      H L +   L+ALMR  R +L N H H      ++MP+ +T L+   LG    +  +HW LR+ +A +VA +C+R+G A+ NLQ+ V   L  A    +     LP  YGA+ G+  LG
Sbjct:    3 VVPKEAIEVIAQSIGINKLSPDVAAAVAPAVEYRLREIMQEAIKCMRHSRRTVLTSEDVDSAFKLRNVEPIYGFTSG----------DPLRFKRAAGHKDLFYIDEKDVEFKDVIDAPLPKAPLEAAVTAHWLAIEGVQPAIPENPSAEGSDGKKYEFKEDGIPIDVKLPV-KHVISRELQLYFDKIKELTLSKSD-SIMFKQALLSLATDSGLHPLVPYITHFISDEIP-------------------HNLTKIPLLFALMRVIRSILQNPHIHIEPYLHQLMPSVITCLVTKRLG--IKLSDNHWDLRNFSASLVASICKRFGHAYHNLQSRVARTLLHAFLDPN---KTLPQHYGAIQGLAALG 333

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BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A077WT57_9FUNG (TAF domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WT57_9FUNG)

HSP 1 Score: 160 bits (405), Expect = 4.950e-40
Identity = 123/412 (29.85%), Postives = 196/412 (47.57%), Query Frame = 1

Query:   10 RQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP----------SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHF----HEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRC 1203
            ++ +  +  +L +  + +D A  LA   EY + +L+QEA K  R SKR R+T DD+N AL  ++VE LYGY  S                  A  D    T D  ++   + +  LPK P++ T   HWLA++G QP IPQNP          S++          + ++DV    P  +  LS+E Q Y +R+ EAVL   +R       F+SL+ DPGL ++LP+  + I ++     K                 L  L A++  A  +L N H     +  +++P  +T L+  T+  D     DHW +R   A ++A +CR+YG+A+  LQ  +   L  AL         L T YGA++G+  LG  +   ++LP ++   AH    +  +L +G+  R +EA +C
Sbjct:    6 KETVKNIGESLGITNLKDDAASALAQDVEYRVHELIQEATKFMRHSKRTRLTVDDINSALRAKNVEPLYGYACSGT--------PKFRKTSVANTD-VYFTQDDELDFDTILSKPLPKIPLDVTFTAHWLAIEGVQPAIPQNPTPGDAKADLLSKRSKSHGGTSALSDQVDV---KPLVKHVLSKELQMYFERITEAVLSEDERLRS--QAFESLRMDPGLHQLLPYFVQHIHKKVTQNHKD----------------LDVLDAMLSMAHSLLNNQHLFVEPYLHQLIPPIITCLVGRTISEDPF--QDHWAVRRRAASLIANICRQYGKAYHTLQPRIAKTLVRALLDPS---RPLTTQYGAIIGLDALGTEVTRVLVLPHIKFFSAH---CLENALTNGNPQRVQEAEKC 379

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351551 vs. uniprot

BLAST of jgi.p|Trimin1|351551 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YRS7_9STRA	0.000e+0	100.00	TAF domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A6H5KPB7_9PHAE	2.350e-42	35.18	TAF domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A6A5C846_NAEFO	5.090e-42	28.80	TAF domain-containing protein n=2 Tax=Naegleria Ta...	[more]
D8RG19_SELML	2.680e-41	30.19	TAF domain-containing protein n=2 Tax=Selaginella ...	[more]
A0A1Y1VM90_9FUNG	6.270e-41	30.95	DUF1546-domain-containing protein n=3 Tax=Neocalli...	[more]
A0A1Y1HNQ6_KLENI	1.540e-40	29.58	Transcription initiation factor TFIID subunit n=1 ...	[more]
A0A485KP26_9STRA	1.830e-40	29.55	Aste57867_9761 protein n=1 Tax=Aphanomyces stellat...	[more]
A0A7J7C9A9_TRIWF	3.190e-40	30.53	Transcription initiation factor TFIID subunit 6 is...	[more]
A0A2I0L9T5_PUNGR	3.210e-40	30.79	TAF domain-containing protein n=1 Tax=Punica grana...	[more]
A0A077WT57_9FUNG	4.950e-40	29.85	TAF domain-containing protein n=1 Tax=Lichtheimia ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_93	contig	Contig_93:349796..361897 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351551\|estExt_Genemark1.C_Ctg_930053
BRITE	ko00000,ko00001,ko03021,ko03036
KEGG Pathway	ko03022,ko05168,map03022,map05168
KEGG ko	ko:K03131
GOs	GO:0000123,GO:0000124,GO:0000228,GO:0000428,GO:0000785,GO:0000790,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005694,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006352,GO:0006366,GO:0006367,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016569,GO:0016570,GO:0016573,GO:0016591,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019438,GO:0019538,GO:0030880,GO:0031248,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044798,GO:0046483,GO:0051276,GO:0055029,GO:0061695,GO:0070013,GO:0070461,GO:0071704,GO:0071840,GO:0090304,GO:0090575,GO:0097659,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902493,GO:1902494,GO:1905368,GO:1990234
Description	Transcription initiation factor TFIID subunit
COG category	K
Max annot lvl	35493\|Streptophyta
EggNOG OGs	COG5095@1\|root,KOG2549@2759\|Eukaryota,37MFK@33090\|Viridiplantae,3G92R@35493\|Streptophyta
Evalue	2.86e-42
Seed ortholog	88036.EFJ13670
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Histone-fold
Ec32 ortholog	Ec-15_000650.1
TranscriptId	351873
Track	FilteredModels1
ProteinId	351551

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351551	gene_12055	Tribonema minus UTEX_B_3156	gene	Contig_93 349796..361897 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12055_1	exon_12055_1	Tribonema minus UTEX_B_3156	exon	Contig_93 349796..349927 +
exon_12055_2	exon_12055_2	Tribonema minus UTEX_B_3156	exon	Contig_93 351003..351209 +
exon_12055_3	exon_12055_3	Tribonema minus UTEX_B_3156	exon	Contig_93 352371..352556 +
exon_12055_4	exon_12055_4	Tribonema minus UTEX_B_3156	exon	Contig_93 353714..353866 +
exon_12055_5	exon_12055_5	Tribonema minus UTEX_B_3156	exon	Contig_93 354892..354921 +
exon_12055_6	exon_12055_6	Tribonema minus UTEX_B_3156	exon	Contig_93 355366..355482 +
exon_12055_7	exon_12055_7	Tribonema minus UTEX_B_3156	exon	Contig_93 356317..356382 +
exon_12055_8	exon_12055_8	Tribonema minus UTEX_B_3156	exon	Contig_93 356963..357028 +
exon_12055_9	exon_12055_9	Tribonema minus UTEX_B_3156	exon	Contig_93 357293..357367 +
exon_12055_10	exon_12055_10	Tribonema minus UTEX_B_3156	exon	Contig_93 357801..357896 +
exon_12055_11	exon_12055_11	Tribonema minus UTEX_B_3156	exon	Contig_93 359051..359173 +
exon_12055_12	exon_12055_12	Tribonema minus UTEX_B_3156	exon	Contig_93 359883..359978 +
exon_12055_13	exon_12055_13	Tribonema minus UTEX_B_3156	exon	Contig_93 361658..361897 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12055	CDS_12055	Tribonema minus UTEX_B_3156	CDS	Contig_93 349796..349927 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_12055	UTR3_12055	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_93 361826..361897 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351551	Trimin1\|351551\|estExt_Genemark1.C_Ctg_930053	Tribonema minus UTEX_B_3156	polypeptide	Contig_93 349796..361825 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_93:349796..361897+
coding sequence from alignment at Contig_93:349796..361897+

spliced messenger RNA

>mRNA_12055 ID=mRNA_12055|Name=jgi.p|Trimin1|351551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1587bp|location=Sequence derived from alignment at Contig_93:349796..361897+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATATCCAGACAGGCGATTGCGCCTGTGGCGGCCGCCTTGGCTGTGGG
TCCAGTCAGCAATGATGTGGCGGAGTTTCTGGCGAGCTCTGCCGAGTATC
ACCTTAAGGACCTTGTACAAGAAGCCATGAAGATCGCGCGGCGCTCCAAG
CGGCGCCGCGTCACCGCGGACGACGTGAACTACGCGCTGGAGATGCGGAG
CGTTGAGGCGCTGTACGGCTACCGCGCGTCGGCGGTGGTGGCGGCGGTGG
CGGCGGCGACGGACAAGGGGGGGGCGGGGGGGGGGGCGGGGGAAGATGGG
GACTCTGCGACGGGGGATCGGCGCGTCAACACGCTGGAGGTGGCAAATGC
GGGCCTGCCAAAGTGCCCGGTGGAGCCCACGTGCATGCTGCACTGGCTGG
CGGTGGATGGCAGGCAGCCGCGCATACCGCAGAACCCGTCGCGGCAGCAG
CGCGCGGCGGCGGCCGCGGCGGCGGCGGCGGGAGAGATCGATGTTATCCG
GGGCGCGCCCACTGGCGAGCAGGAGTTGAGCGAAGAGAGCCAGCGCTACC
TTGACCGCGTGCGCGAAGCAGTGCTCCGGTCGTCCGATCGCTCGGCCGGC
CTGGGCCCCGTCTTTGACAGCCTCAAGAGGGACCCGGGCCTGCAGGAGAT
ACTACCACACATCTGCCGCTTCATCAAGGAGCGCACGCAGGCGTGCGTCA
AGGGCAACGAGCGCACGCAAGCGTGCGTCAAGGGCAAGGGCGGGCGGCAT
GCGCTGTGGCAGCTGTACGCGCTCATGCGCGCCGCGCGCTGCGTGCTGCT
CAACGACCACTTCCACGAGATGGAGATCATGCCTGCCGCGATGACAGTGC
TCCTGTGTGCAACTCTCGGGCCCGACACCGACATTGACTCGGACCACTGG
ACGCTGAGGGACATGACTGCCGGCATCGTCGCGTACGTTTGCAGACGCTA
TGGCCAGGCATTTCCAAATTTGCAAGCGGACGTGGTGCTGATGCTCGGTG
AGGCTCTGAAGAGGAAGGACTTCAAGGGCACGGCACTTCCAACCTTGTAC
GGCGCAATGGTTGGCGTCATAACCCTGGGGTTCCACATCATAGCAGCCGT
GCTGCTGCCGCTGCTGAGGCCTCTGCAGGCGCACCTGAGCGCTGCTGTGG
CACAGAGCCTGAAGAGCGGCGACGTCGCGCGGCGCGAGGAGGCGCTGCGC
TGCGTCGCCGTGCTGACGCTCGCCGCCGGCAGTTTTGCGGTGCAGCAGCA
GGAGAGACTCATACAGGGATTGCCCGCGTCCATGGTGGCGCTGAGTGCGG
GCGCCTCTGCTACCGCTGTGGCGCAGCTCTCCGACGGCATTGCAGCGGTG
AAGGAGGTGTTTGGTGGCACTGTGCTGGAGCCGTTTCTACGCACCGCTGC
CGCGCGCTGCCACCAAGACACAAGTGACCTCTGCGCCAGCTGCGACAGCT
TGATGCTGGAACCAGCAATACGGAGGAGTCGACAGCCGCCTGCAGCCCCC
CTGCTGCTTTTCTGAGTCGGCTACAGTGCGCTCAAATGAGATCCTACACG
TTTGTCTGGGTGTACTTGACACCACTGAGATGCCAAC

protein sequence of jgi.p|Trimin1|351551

>Trimin1|351551|estExt_Genemark1.C_Ctg_930053 ID=Trimin1|351551|estExt_Genemark1.C_Ctg_930053|Name=jgi.p|Trimin1|351551|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=505bp
MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSK
RRRVTADDVNYALEMRSVEALYGYRASAVVAAVAAATDKGGAGGGAGEDG
DSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQ
RAAAAAAAAAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAG
LGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNERTQACVKGKGGRH
ALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHW
TLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLY
GAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALR
CVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAV
KEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAP
LLLF*

mRNA from alignment at Contig_93:349796..361897+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12055 ID=mRNA_12055|Name=jgi.p|Trimin1|351551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12102bp|location=Sequence derived from alignment at Contig_93:349796..361897+ (Tribonema minus UTEX_B_3156 )
ATGATATCCAGACAGGCGATTGCGCCTGTGGCGGCCGCCTTGGCTGTGGG
TCCAGTCAGCAATGATGTGGCGGAGTTTCTGGCGAGCTCTGCCGAGTATC
ACCTTAAGGACCTTGTACAAGAAGCCATGAAGGTACTACATCTTGCAAAG
AGGTTGGCACGCGTAGGCCTCTGTGCGCAATTCTTAATTCTCTGTGCCGG
CATAGATGGTCGATTAGATCGAAATCAAGCGTACATGTGCAGCGCTGACA
TGCAGGCAGGTGGGCATCGCCACTAATGCACATTTTCGATGAACAACTTT
ACTTGTGTTGATGTTGAATAATGCTGCTGGGTTTCAAGTTCAACAACAAC
TGCAATCGCGAGCACTCTACAACATCACCGCAGCCTTGCCAGTGCAGCAG
CACATGATGGACCAGATATCATCAGGTGTGTCCGATGTGCATACAATTGC
CAACATTAAACACCACTAAGCAGCAGCCAGTTTGCCCAAGCTGCGCACTA
CACTAAACAGCAGAGATCGTCCACAGATTAGGGAATCGACCCAGTCCACG
TCCAACCCAATTGGCACATCAAGCCGCTTTTATCATTATGCATAGCTGTT
TGCGTGGCCAAATTTGCAGCTTTTTTGCAAATGTTGTGGTTTTAGAGTTT
ACAGCTATTCCTGCGCTTCAAGGCGCGCCAACACCGGCACAATCCTCATC
ACAGTCACATCCCAATGTTGTGGGCACTGACAGCACCACTTGATGGCGTG
GGAAAAACTACGCACCTGCGGCCGAGCCTGAACCACACATTGTCCAGGCA
CAGTTTTATGGCGAAGGCTTTCTTAGCGCAGTCGCAATTGCTAGTGTCGG
CAATGCCCCACGCTGCTGCTGCTGCGAAGGTCACCTGACAAATATGAAAT
CATCTGCCTTTGTGCAGTGCAGCGGCATGCGGTCCATACCACTTGCGTTT
GCCATCGACGACAGCTCTGCGCCGGAGCAGCGAAGCGCGGAGTCATTATA
CCACACGGAACATGTGGTACAGCAGCTGCAGCAGCGCCGTGGCGGCATGA
GCCAACGCCTTGGTTCCCATGTCTGCAGCAGGCGGCAATACTCCAGGCGC
CACCGCCTGACCGCCAACAACCTCCCCCATCGCTCGCACCATGCTCCATT
CACTCAATTTGACACATCTTCAACAGTGAAGTACCCAATCACGCGCGCGC
ACGCCAGATCGCGCGGCGCTCCAAGCGGCGCCGCGTCACCGCGGACGACG
TGAACTACGCGCTGGAGATGCGGAGCGTTGAGGCGCTGTACGGCTACCGC
GCGTCGGCGGTGGTGGCGGCGGTGGCGGCGGCGACGGACAAGGGGGGGGC
GGGGGGGGGGGCGGGGGAAGATGGGGACTCTGCGACGGGGGATCGGCGCG
TCAACACGCTGGAGGTGAGAATATCCATACATGGTTTCATGAATGCAGTC
GTGCATGCATGAGCACTGCGTTTTACAGTTCATGCGACATGATCTTGAAA
CATCAGTTGTATCAGCGCGCTTGCCCTCGACGGCCCGGCTCTAAACTCTT
CTGAGCCCGTTCGTGAAGCTCCAGTTCCTGCTGTTGGCGAAGAGGAGTAG
CATGGACGACCAGATAATTCTGTAGTTAGTGCTCAGCAGATGAGCTCATT
TTCACGTGAGTTCAACAGTGCAGAAAGCACGGTGAGTGCCGCTGTATGCC
TCGAGACAATGAGGTGGAAGTCAGTGCTCAGCAGGGGAGCTCTTCTTTTT
GCATGTAAGTTCACTACAGTAGTGCAGAAAGCGCGATGAGTGCCGCTGCA
TGCTCCGGTCTGTCGTCGTAGGGGGCGTTTGTGTGCATGGCATGTTCACT
GAAGACCTGGTAGACTAGACGCTGACCTAATGTATGCTGCTTAAGACACT
TGCGCCCCGTGGTTAGGGGCTCAGAAGGCTCGGCCAGTAACAAAACAGAA
ATGGCTGGAATTCCTTACACCTAACGGAGTTTTACTGTGATGAGATTGAA
GCACACAACACAACGTAGCAACTCAACTTGGGAACTTCAAGTGTTGCCAC
AGCTTCGCAACCTCAATCATCACTGGCAAACGTTTCAACTGAGCGCCATC
AACAGTAAAACTCATCGCCTTGCGCCTGAAGGTTGTTGGCGGTTTCAGCA
CAAATGCCCGCCTCACGCCAGTGTGAAAAACATGCATTTTTGTGATATTG
AAATTGCTGAATCATGACACTGACACCGACCGCCTGAAACACTGTATGCT
ACTGATATCAACAGCTACGACAGACTCAGCAACCACCGCTGCAACAACAA
TCATTCGTGTTCACGTACACATCAACAAGCACGTTCCCACGAAACCCTCC
TCTGCGTGTTAACATACACATCAACAAGCATGTCAACACACAAATCCCCC
CTCTGCATGTTCACATGTACATCAATGAGCATGTTCACACGAACCCCTCT
TTGCAGGTGGCAAACGCCGGCCTGCCAAAGTGCCCGGTGGAGCCCACATA
TACATCAGCGAGTAGACTCACACGAAACCATGTATACATCAGCGACTAGA
CTCACACGAACCCCCGCCTCTGCAGGTGGCAAATGCGGGCCTGCCAAAGT
GCCCGGTGGAGCCCACGTGCATGCTGCACTGGCTGGCGGTGGATGGCAGG
CAGCCGCGCATACCGCAGAACCCGTCGCGGCAGCAGCGCGCGGCGGCGGC
CGCGGCGGCGGCGGCGGGAGAGATCGATGTTATCCGGGGCGCGCCCACTG
GCGAGCAGGAGGTGAGGTTGGGAGTGTTTGCAGCGAACAGTGACGGTTAC
AGTGTGACTTTCAATAGTCGCAGTCGATGCCTCTGACTGACACGTTGCGG
GCGGGAACTTGAAGCCATTGATTAAATGGGCCACAGCGGCGGCGGGCAGC
AGTGGCGGCGGCGGGTACGCTCGAGGTGATCCGGACTGAGACCCTGGCAA
ACAGGAAGTGGGGTTGGGGTGTTGCGGTGGACACTGCCTGTTTCATGGTG
TAGAGGTGTGAGTTAGGCGAGTTGCTGTCAATGACTTTGGTGGGTTGCTG
GTGAGACACTGAATGCACCAATGACAAATATGATGAACGCGTGCTGACGC
CCTTCGGCAGTGCTCAGCAACAGCGGTGGAGAGCTGGACGTGTCTGGTGT
TGCGCTTAGTGGCCCACAATTGCCTGCCGATGTGCAGCTTCCTAGACAGT
ACACCAGCTTCATCCATCGGAGTGACATTTTGGTATCTGGAGTGCAGGGA
GGATGTTGACGCGATTATTTCGTGTGCCACAGGCTGTGGCCCACAGCCTA
CTGATTTGCATGTGACTTGAGAGAATCTTAGTGTTTGTCTTGTGCTCGCC
AGCAGCGCTCAGCAGCAGCAGCGGGCAGTCAGTTGGGGGCCTGCTTGTTT
TCAACTGCGCAGTGTGTCTGCCACTCGCGCTGTTTTGTGAAGTTGTCCAT
TGATCCAGCAGCATGGTGCTTTGTAACGCACCAGTAGCACATCAAGCGCC
CCTTTGTGACGATGCTCACCTACTGCTGCAGGAATTTTTTTTTAATTTCT
GATTGACAGACACTTACAGCGGGTGCTCACAGTCGTGGCACCCTGCACAG
TGCTCAACAACAGTGCTCAGCGCCAATGCTAACACGCTTTGCTGCGGGAC
CAGCTTGAACACACACTTGCAGTAGAGGCAGCATACTCTTTACGAGCAGC
AGTTGGCGCCAGCGCTCGGTAACCGCTGCTTAAATGCCAGTACCAATAAA
GCGCAACACCGAACCAGAGAGGGGTTGCCCCAACCCCAATTCCAGGCGCC
AATGCCTGCTGCTGTGAGCGGCAACAATTGCTCGTTGCAGCAGCTGACTT
GAACAAACATTTTTGAAGAATGACAAGCAGCACTATGGGCATCGATTTCT
CCTTTTTGCGCACCGCAGTTGAGCGAAGAGAGCCAGCGCTACCTTGACCG
CGTGCGCGAAGCAGTGCTCCGGTCGTCCGATCGCTCGGCCGGCCTGGGCC
CCGTCTTTGACAGCCTCAAGAGGGACCCGGGCCTGCAGGAGATACTACCA
CACATCTGCCGCTTCATCAAGGTGATGCGCCACATTCTGCCATTTTGCCA
AGGTGTACTGCCGCATCTGCCGTTGTGCCAAGGTATAGTGCTGTGCAGCT
GCCGCTTCACCGACGCACGCTGCCGCAATCTGCCGCTTTGTTTATGTATG
CTGTGGCGCCTTCAACACTTCATCGGGTAGACTGATGCAAAGCTGCCGCG
TCATTGAGTTACACTGCCGCAGCGCACCTGCCGACCTCATTCTTTGACAG
TGCACAGTCAAAATTGAACCCATCCGTCAACCACGCCTGTTGAACTGGCA
TGTTGTTGTGCAAATCCGCATGCACGATGCGCAGCAACGCCTCCTTTTTT
TTCTTTCAAATACATCACTTTGAAGTATATTATTTCTTAAACGGGTAGGC
CACATGCAGGAGGGTCAACCTGGGGCATTGTCCCAACATCTGTTTTTATA
GGAGTTTACGGCTGCACCGCTAGGCGCAGATGCTCAACGTGAAAGTCCGT
GGGTGCTGACATCATTGCGTGGGATAAGGGAGCCCACGTTACGCTGCAGC
ATCGGCTCCATTGACATCTGCCTTTGTGCACGATGCCGTGCAATCTGAGG
AACCGTATCATGACCCCATGCGCTGTGCAGTCGGCCTTGTCACTGCCCTC
TTGCTCAGCACATTGTGGCAGTTTGCTGCTGACTGTGTGCGGAAGAAGCA
CTGCCCGACGCCCATCGCCACCGCAGCTGTGCACTGCCTCCCCCGCTGCA
AGGAGCATTGAGCGTTGGTGGCTTATACCCCTTCCCCCATGCTCGGTGCT
CGCGTTTCCTCGCTGGATTTTGTTTTTATTGCTCATGTGCATCGTCACCG
CCGCTGTGCGTTGCCTCCTCCACCGCCATAAGCGAACGCAGAGGCGTGCG
TCAACGGCAACGGCGCACGGCACGCGCTGTGGCAGCTGGAGCAGCAGCTG
ATCTCGCTGCCTGCAAACCGCACTCACCAGCACATGCATCACTGTGAGCT
GATGTCAAGCGTCACTCCTGCTGTGCGCTGCATCCTCAATCCCCAGGAGC
GCACGCAGGCGTGCGTCAAGGGCAACGTCAGGCGGCACTCGCTGTGGCAG
CTGTAGCAGCAGCTTGTCGCTGCAAACCTCATACACCAGCACATGCATGA
AAAAGTGCTGATGTCAACCGCCACTCCTGCTGTGCACTGCCTCCCCGATC
ACCAGGAGCGGACGCAAGCGTGCGTCAAGGGCAAGGGCGGGCGGCACTCG
TTGCGGCACCTGTAGCAGCAGGTTGTCGCTGCAAACCTCATACACAAGCA
CACGCATTACTGAGAGCTGACGTCACTCGCTCGCTCCTGCTGTGCGCTGC
CTGTCCTATCACCAGGAGCGGACGCAGGTGTGCATTGAAGGCAAGGGCGG
GCGGCACGCCCCGTGGCAGCTGTAGCACAGTTTGTCGCTGCTTCCAACTT
TTACACACAAGCACACGAGTTACTGCGAACTGATGTCAATCGCCACTCCC
GCTGCCTCCCCAATCGCCAGGAGCGCACGCAAGCGTGCGTCAAGGGCAAG
GGCGGGCGGCATGCGCTGTGGCAGCTGTACGCGCTCATGCGCGCCGCGCG
CTGCGTGCTGCTCAACGACCACTTCCACGAGATGGAGGTCTACCTTGCAC
AGGCGAGTTGCGGTAATGATCATGCATTGTATGTTACTGAACACCCATGC
CTCGGACGCTAAACAGCTTGCACAGAGAGTAATTTGAATACTGTGGATAT
GATGGCACTATGTGACTCGTGGCCCATGGCGGCAGCAGCAGCAACCACGA
TTATTGGTGGAAGGCGCTTGCGGCTAACCACTCCTTGTCACCTAAACCTA
GACGATCTTTTGATTCGTCTGCATGTTAACTGCATGTATGGAGGCTTCTG
GTGGCCGTCAGAGGGTAGCCGTGCGCAGGCAAACTAAGCTGTCTCTTGCA
GTGCCACCTTTGATGCCAGATGCTGGGGTATCAAAACTTGCAGTAGCAGA
TTTGTGTTGTGATGCATGCCTGGTGCTAATTGATGCACTATCATCAGAAA
TAGGTGTGTTCTGGCGCTGGAGAGCGCCCTTGTCTTTTGGCGACAACAAT
GTTTGTGTGCGGCCATGTTGACCAACCTTGAAGTCGTCAAGCTCTTGGTG
GTGTAGGCAGTTGGACGCACATAGGCACAAGCTTGAGTGCGACAGGCGGC
AGCAGCGCTGCTGCAGCTGCACCGTACGCCAACGTGCAGCAACGTCAGCA
ACTGCGGTGAGCAAGTGCAACAAACCTCAAATTCGCAGCTTGGAGGCCTA
TCCTCGTGGCTGAAAAATGTACGTAAAGCTGGAGTAACTTATACGGTGTT
GGACGCTCAGAGTGCTCATGTGTGTCTGCCTCAATATTTAACAAAGCGTT
GGTGCTATCATTCTTTTTGTTCATGCAGTCAATCATACTGTTGATGATAT
TGTGCTCTGCTCCGTATTCAGATCATGCCTGCCGCGATGACAGTGCTCCT
GTGTGCAACTCTCGGGCCCGACACCGACATTGACTCGGTGAGTTCCAGCT
GCAGTCAGCGGCGCATAACACTGCTCAAAGTTTGAATACTTTGCATTGCG
TTGTGCGCTGCAGTCTGTTCAGTGCACGAGCGCGTCAAAATTGCTGGCGC
ACAGGCACATCAGGCGTTAGTTGCAGCACAGAGTCGCAGGGGCACAGCGG
CGCACTACGCTGTCTGCTCGGGGGGGGGGAGGGGCTTGCGAGGCCCCCTG
CGTTGACAGTCGAGCTGTAGCGCACTGGCCCGGAGTGGATGTTGAGCTAG
AGCTGCATGCTGCTGTCGGAGAAGTCACTGGACGCGTCGTAGTGGCGCTT
GGCTTACGCCATGCATTGCCTCGTCTTTCACAAGCAGCCTTCAAGCATCC
AATTCCTACTTCTCCTATAATATCTCTCAGCCCAGCCTGTGTCCATGGTG
CTCTACTTGTCAGGTATCGGTTCAAGCGCTTCGTCTATCGTTGAAGCAAA
AGTGCCCTCTCCGCATATCACAATGACAGAGGATATTAAGTCGCAGGAGA
AGTTTAAAAGCCATGACGTCACATGCACTTTATATCATGCGCATTCCGCT
GCGCTCTGCTGACGCAGGACCACTGGACGCTGAGGGACATGACTGCCGGC
ATCGTCGCGTACGTTTGCAGACGCTATGGCCAGGTGAGAATGCCGCAATT
TCTCTTTGGCATTTTTGTTGTTGTTGGCGTTTTCTGTGGCTCACATCTGC
ATGTTCGCATGTTCACATACGAGGCATGTGCATGCTGGCACCGTGGTCTT
ACTGGCGTCCCCGATCGCTGGCGGTTCCACATGAGCATGCGCAATTACTG
TGCACTGCCTTGTACATGCCTACCTCTGGCGCCCGTACCCCCCCTTTACC
CCCACACCCCCTCGCCCTCGCCCTCCCACCCGCTTGATTGCTCGCAGGCA
TTTCCAAATTTGCAAGCGGACGTGGTGCTGATGCTCGGTGAGGCTCTGAA
GAGGAAGGACTTCAAGGGCACGGTGAGCGCCAGTAGGCCTGTTCCATCAA
GTCGTGCAGTGAGGGCGGGCGCATTTGCATCAGGCTACAACACCTGGTAC
AGCAATGTCATTCTGTGAAGGACATTTGTGAAGTAGCTGGCACAGCTTTG
CACACGGAGCGCACCTCCTACTTGCACCCTGTCAGGTTTTGGTGCAACAA
TCAGTTTCAGGCAGCAATCCTCGTAGTTGTCAGGCGCTCATGAGCCTTCT
CAGTCATGCTTCATCCCACTTGTCACCTTGTCTGTCATTTATATAGCATT
CTTCAGAAGTATCCATTTTTGCGCCTTCACAAAAAATGTAACGTCCATCT
GGCGCCTTTCCAATGCTTCTGTACTTCGCCAACTTAATCTGTAATCAAGC
TGATGTCATTGACTAAGCTGCTCAACTTCTGCGCACTGTGACTCTCGGCT
GTCAGGCACTTCCAACCTTGTACGGCGCAATGGTTGGCGTCATAACCCTG
GGGTTCCACATCATAGCAGCCGTGCTGCTGCCGCTGCTGAGGCCTCTGCA
GGTGAAGCAAATTTTGTTTCGTTGGGGATGGTGAGGGAGCAATCGCCTAA
TTGGGGATCAGTGCGCAGAATTAGGAGTGTTGTTGCGGGCACACATGAAT
TAGCATACAGTTCTACTAACAATATGATGACCAATGTACAGCACCGTTCC
ACACGCCACTGGTACAAGGGTACCTGACTGCTTGGTTCTGAAGCAATTTC
TGTTGCGTGCCGTTGTAGCAGCGCTTATACCTTTACAGGTGCAGGAGAGC
TCAACAAGATGGCAGCCACAACAACATATTGTTTTCACGGCATAAATTAT
TGCGCTACAGTACCGGCATTGCATACGTAGGCCTATAAAATTGCTGAAAA
ACTGAAAGAAAACTTGGTAGAAGTGTCTTTCACAGAATGCGTTGCGCGCT
AACGTTGTTCAAGGTATCACTTGCTCATTCTGCAGAATACGCGCTTGCAT
TGACAATCCGCACGGAAGTGACAGTGAAGGTATCAGCTGCTGCGCCGCAG
AACGTTGATCAGAAGGTACTAGTCCGCCACATGTCACAGCGGCATTCTGG
CAGGTTTGTTAGAGTGCATTCGTGTATTGAGGCACTTGGTCAAGTGCCCT
CATCACTGACATACAATCTGATATTTGAGATGCACAAAAAATTGCTAGTT
TGTAGGAAGCGGATGCGTGTGCAAACAGAAAATGTGCAGATCACATGAAG
TGCGGAAATATTTTATTTTCAACAAGACAGCGTCTGTGAAACCTTTGCTA
CGGACACGATGCAGTCATCACATTTCATTTACATTTTGGTGACATGACGC
TGATGCCACATTTCACCCACAACAAAGCAAACACAGCACTGACGAGCGCA
CACTGACCCATGCCCTGACTGGCGACGCAGGCGCACCTGAGTTCTGCTGT
GCCACAGAGCCTGAACAGCGGCGACGTCATGCCACTGTTGCCACATTTCA
CCCATGATGATGCAATTACAGCACTGACTGGCGCACACTGACCCACGCCC
TGACCGGCGGCGCAGGTGCTTCTGAGCGCTGCTGTGACGCAGAGCGTTAA
CAGCGACGCCGCCATGACACATTGCCATATTTAAATCACGATAATGCCAT
TTCAGCACTGACCAATTCATACTGATGCTGACCCATGCCCCAATTATCAA
CGCAGGCGCACCTGAGCGCTGCTGTGGCACAGAGCCTGAAGAGCGGCGAC
GTCGCGCGGCGCGAGGAGGCGCTGCGCTGCGTCGCCGTGCTGACGCTCGC
CGCCGGCAGTTTTGCGGTGCAGCAGCAGGTACGCCGCCGCCCGGCACGCT
GATTACTACTGAACAGTGCATTTTCACGTGCCGCCATGCTTGCGATTAAT
TGGCGCACATTTAATGAAAAAATGTGTGCACCTTCATGTACCGCCATGCT
TACGTTTCATTGGCGCACATTTTATGATGAATGTATGTGCATTTTCACGT
GCACGCCATGGCTGCACATTTTCAACTCTACCCTCGTCTCGAAGTCAGCG
CAACTTGCTTTGTGTTCTGTACACAGCAGCAGGTTGTGGGCACCCGGATT
GCTGTGCTCAGGGACTGTGGCGTGCCGCTCTATCTATGCCTTGTGGTGCA
AAGCACATCACCGCCGCAGCTTGCAGTGAGGGGCAGTGTTGACAGCGGCA
CGGTGTGGTATCCTGGTTCACGGGCCTGAACTGAAAGGCAGCGTTTCTTC
AATTAACATCATCAATTGAACACCAGCGCTGCATCACGCAAGTGCGCTGC
AGTGTCATTTACAACTGTTTCAGCAAGTGGTAGCTGGGTCTCCGTCATTC
TCTATCATCTCCAACAGCTCTCAATATGTACGTGTGCTGTGCGTCCGCAT
CAGCAGAAACTGCGCTGCAGCATTAAATTCATTTGTGCAAACTTGAAAGA
GCCAGTTGCGCCGTCATCGCCGTCATCGCTCTCCATCACCTCCAGCAGTT
CACAGTACATTTGTACGCTGTACATCCGCATCCACAGGAGAGACTCATAC
AGGGATTGCCCGCGTCCATGGTGGCGCTGAGTGCGGGCGCCTCTGCTACC
GCTGTGGCGCAGCTCTCCGACGGCATTGCAGCGGTGCGTACATGCCTTCT
GAGAGAGTTGGATCAGTGTGGTGATGCTCCTGACCTACGCAGGTGGTACA
TACCAACATGGCATCACATGATGCCTCATGCATATGCCGGCCATCCACAG
CTCCTGGTGGCGCGGAGCTGGCGCATCTTGCTTTGGCGTTGCCTGAAGAT
TACGAGCCGCCAGCGGTGCTTGGAGTGGACCTGAGTAGCCTTGCAAGTAT
AGTATTATCTGAAGCTTGTTGATCATGCGCAATCACTCCTGTCACAGCAC
AACTGTGAAGACAAGTGAGCTTTCTAAAAGTTTCACACCTTAGACGACAT
GATGCTTTCACGACATAGTCGGTACAATATGTCGCGACGGTGCCGCCAGA
AATCATGTCGCGACACAGTCGCGCACCGTCTGCTTAGATCTTGTCGTCTA
GACGACGGTGTTGACGCACCGTTCATGAGGTTCATGTCGTCCATTCACGA
CACCGTTGCGCAAGGTTGGCGCTCTTTATGTTGTGTCATGTCGTGTATGT
CGTAGCATGTCGTGTATGCACATCAGTGCACACAGCATTGCTTCCGCGGT
GGCTTGCCGCAGTCAGAGCGTATTCGTTATAACGGATGACACTTACGCAT
GCTCTGATCTGATCTCTGAGTTACTCACGCCGCATCCGCATCGTGATGAT
CGTGATGATCCACGTCAAGCTCGGTGTATTCATCAGTTATCCCGAAAAGA
GCCTCCTTGCGTGAGGTAAGAGGTAAGACGCTGGGAGCTGGTGCAGATGT
TGGTGGTGCAGCGATTTGCCCCAGATGTGCTCTGCAGTGAATCCAGGGCC
CAATCAGCTAGAGCGTCTGGCAGTGAGACTGTGTTCCAAATCCGTTTCAG
CCGCTGTTGGAAACGCGTTTGAGAACATGATGATTACATCAGAGAGTAGG
CACCACTATGTAGTGTGAATTGGTGTAGCATGACACTACTTTCGCAGCAG
TTGTAGCAGCGCAATAGCTGCAACAACCGGCGTCTATCGCACTTCAACTT
CTAGCTTCAACTATGTCGTTCTGTGTCGTTGCTGTCACGACATGGTTGCG
TGCTCCTGGCAGAACCTATGTCGTCTAGACGACCATGTCGCGACATGCCT
GTCAAAGCTGATGTCGTCTAGACGACATATGTCGCTTGCCACTGCTGCAA
CCCCTGTCGTCTGGACGACCATGTCACGACATACCCTCAATGGAACATGT
CGTCTCGACGACTATGTCGCGACATGATGTCGTCTAAGGTGTGAAAAGTT
TGGTGCCTACGTCTATACTCTGAAGTTCGCATGTTCGGCGCTTGGACCTG
TTCCCAGAAGCAGTGGTCTTCGGCAATCTGCACTTGACCAGGGCAGGCTG
GTGTGCAAAGAAGTAATTATTGTGTAGGTGCTTATGCAAGCAGTGATTGT
TGTGTAGGTGCTTGTGCAAGTGGAAAAACAGTCCTGATGCACGGTTGGAA
CAGAACTGTACTGGTGCTGGACCAGTCCATGGTGGACTAACAAGAGTAAC
TTCACTGTGGTGAGAACCTGTGATTTGTAGGCACATGCAAAACAGGGTGT
GTGGGTATCATACCCTGTCGTATGTATCTGATGCAACAAAGCAGTAGGGA
TGTGAAGGCCTTGACAGTAGCTCTCACACTTAACTTTACGGCCTGTGCTG
TTGTACTTGCAGGTGAAGGAGGTGTTTGGTGGCACTGTGCTGGAGCCGTT
TCTACGCACCGCTGCCGCGCGCTGCCACCAAGACACAAGTGACCTCTGCG
CCAGCTGCGACAGCTTGATGCTGGAACCAGCAATACGGAGGAGTCGACAG
CCGCCTGCAGCCCCCCTGCTGCTTTTCTGAGTCGGCTACAGTGCGCTCAA
ATGAGATCCTACACGTTTGTCTGGGTGTACTTGACACCACTGAGATGCCA
AC

Coding sequence (CDS) from alignment at Contig_93:349796..361897+

>mRNA_12055 ID=mRNA_12055|Name=jgi.p|Trimin1|351551|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1515bp|location=Sequence derived from alignment at Contig_93:349796..361897+ (Tribonema minus UTEX_B_3156 )
ATGATATCCAGACAGGCGATTGCGCCTGTGGCGGCCGCCTTGGCTGTGGG
TCCAGTCAGCAATGATGTGGCGGAGTTTCTGGCGAGCTCTGCCGAGTATC
ACCTTAAGGACCTTGTACAAGAAGCCATGAAGATCGCGCGGCGCTCCAAG
CGGCGCCGCGTCACCGCGGACGACGTGAACTACGCGCTGGAGATGCGGAG
CGTTGAGGCGCTGTACGGCTACCGCGCGTCGGCGGTGGTGGCGGCGGTGG
CGGCGGCGACGGACAAGGGGGGGGCGGGGGGGGGGGCGGGGGAAGATGGG
GACTCTGCGACGGGGGATCGGCGCGTCAACACGCTGGAGGTGGCAAATGC
GGGCCTGCCAAAGTGCCCGGTGGAGCCCACGTGCATGCTGCACTGGCTGG
CGGTGGATGGCAGGCAGCCGCGCATACCGCAGAACCCGTCGCGGCAGCAG
CGCGCGGCGGCGGCCGCGGCGGCGGCGGCGGGAGAGATCGATGTTATCCG
GGGCGCGCCCACTGGCGAGCAGGAGTTGAGCGAAGAGAGCCAGCGCTACC
TTGACCGCGTGCGCGAAGCAGTGCTCCGGTCGTCCGATCGCTCGGCCGGC
CTGGGCCCCGTCTTTGACAGCCTCAAGAGGGACCCGGGCCTGCAGGAGAT
ACTACCACACATCTGCCGCTTCATCAAGGAGCGCACGCAGGCGTGCGTCA
AGGGCAACGAGCGCACGCAAGCGTGCGTCAAGGGCAAGGGCGGGCGGCAT
GCGCTGTGGCAGCTGTACGCGCTCATGCGCGCCGCGCGCTGCGTGCTGCT
CAACGACCACTTCCACGAGATGGAGATCATGCCTGCCGCGATGACAGTGC
TCCTGTGTGCAACTCTCGGGCCCGACACCGACATTGACTCGGACCACTGG
ACGCTGAGGGACATGACTGCCGGCATCGTCGCGTACGTTTGCAGACGCTA
TGGCCAGGCATTTCCAAATTTGCAAGCGGACGTGGTGCTGATGCTCGGTG
AGGCTCTGAAGAGGAAGGACTTCAAGGGCACGGCACTTCCAACCTTGTAC
GGCGCAATGGTTGGCGTCATAACCCTGGGGTTCCACATCATAGCAGCCGT
GCTGCTGCCGCTGCTGAGGCCTCTGCAGGCGCACCTGAGCGCTGCTGTGG
CACAGAGCCTGAAGAGCGGCGACGTCGCGCGGCGCGAGGAGGCGCTGCGC
TGCGTCGCCGTGCTGACGCTCGCCGCCGGCAGTTTTGCGGTGCAGCAGCA
GGAGAGACTCATACAGGGATTGCCCGCGTCCATGGTGGCGCTGAGTGCGG
GCGCCTCTGCTACCGCTGTGGCGCAGCTCTCCGACGGCATTGCAGCGGTG
AAGGAGGTGTTTGGTGGCACTGTGCTGGAGCCGTTTCTACGCACCGCTGC
CGCGCGCTGCCACCAAGACACAAGTGACCTCTGCGCCAGCTGCGACAGCT
TGATGCTGGAACCAGCAATACGGAGGAGTCGACAGCCGCCTGCAGCCCCC
CTGCTGCTTTTCTGA