Trimin1|351551|estExt_Genemark1.C_Ctg_930053 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351551
Unique NameTrimin1|351551|estExt_Genemark1.C_Ctg_930053
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length505
Homology
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A835YRS7_9STRA (TAF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS7_9STRA)

HSP 1 Score: 898 bits (2320), Expect = 0.000e+0
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0
Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAVKEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAPLLLF 504
            MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAVKEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAPLLLF
Sbjct:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAVKEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAPLLLF 504          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A6H5KPB7_9PHAE (TAF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPB7_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.500e-42
Identity = 140/398 (35.18%), Postives = 195/398 (48.99%), Query Frame = 0
Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP--------SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSD--RSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEMEI-----MPAAMTVLLCATL---GPDTD--IDSD------------------HWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLG 360
            ++S  ++  + AA  VG VS DV  FL++SAEYHL D++ +A     R KR R+T DDV  +LE+R  E       +++V A             + +  DSAT D +V+  +VANA LP CP+EP   +HWLAVDG+QP +PQNP         +  XXXXXXXXX         +      LSEE   YL R  +A+L   +  RS  L     SL+ DPGLQ++LPH+C FI+ +    +K                   QL AL++  +C+L N +F  +EI     +P  M+ LL       GPD     +SD                  HW +RD  A ++  +C ++G  +P LQA    M    + R     T L TLYGA+ GV  LG
Sbjct:    8 LVSHDSLRIITAAAQVGEVSEDVLSFLSASAEYHLLDVINDASNFRARGKRSRLTVDDVTASLELRGAE-------TSLVCA--------GGGSKSKDSDDSATADGKVDLRKVANATLPVCPIEPGFHMHWLAVDGQQPLLPQNPLPSSGRGKGKSXXXXXXXXXXXXXXXXXXXSSAVRARLSEELTTYLRRCCDAILSRDEPKRSRALA----SLREDPGLQQLLPHLCTFIQTKVPEYLKRQKEPD-------------QLAALLQMLQCLLNNKNFAFLEIYLDRLLPPLMSCLLHIDFERAGPDNGGAANSDYSSFGGIGVHSAARPKWTHWDVRDYAAELLRAICDKHGNTYPTLQARANDMFDTHVARPK---TRLTTLYGAITGVACLG 370          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A6A5C846_NAEFO (TAF domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C846_NAEFO)

HSP 1 Score: 167 bits (423), Expect = 3.270e-42
Identity = 127/441 (28.80%), Postives = 210/441 (47.62%), Query Frame = 0
Query:    4 RQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPS---------RQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPV-FDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFH-EM---EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSA---AVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQ--------QQER 419
            ++ +  +A +L +  + +D+A+ LA   EY +++++Q+A K  R SKR+ +T DDVN+AL M+++E LYG+R  +   +                       D  ++  +     LPK P+ P+   HWLA+ G QP+IPQNPS         + +           +   +   P  +  LSEE Q Y ++V +A+   S++   L     +SL  DPG+ +++P+  +FI       ++                 L  LY LM   + +L+N + H E+   ++MP+ +T ++  TL  + +   +HW+LRD +A I+AY+CR++G ++  LQ  +   L  A        T   T YGA+VG+  LG H+    LL L  P  ++L      +   L S D+  R  A  C   L  AAG+F  Q        QQER
Sbjct:   11 KETVQVIAQSLGINKLKDDIAQTLALDVEYRIREIIQDASKFMRHSKRKLLTTDDVNHALSMKNIEPLYGFRGQSSQPSRFRRVKQTKDLYF--------LEDVELDLKDCLEKPLPKVPIGPSIFTHWLAIQGIQPKIPQNPSIEDTESDRKKPKEKDQSKKVSTSQDPNVEFKPLVKHVLSEELQMYYEKVTDAIKDLSNQKRDLRKAAIESLANDPGINQLIPYFTQFIASEVTNNLRN----------------LTLLYRLMEMTKALLVNPNIHIELYLHQLMPSILTCIVGKTLCENPN--DNHWSLRDFSANIIAYICRKFGSSYHTLQPRITKTLLHAFLDPKRSRT---THYGAIVGITALGSHV--TQLLFLEPPKNSNLKIFCNLLLPELVSPDMHTRHNAFMCFKALLTAAGTFFTQLSRFFKLEQQER 420          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: D8RG19_SELML (TAF domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RG19_SELML)

HSP 1 Score: 164 bits (416), Expect = 1.740e-41
Identity = 128/424 (30.19%), Postives = 204/424 (48.11%), Query Frame = 0
Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQN---------PSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGS 411
            ++ ++ I  +A ++ +  + +DVA  LA   EY +++++QEA+K  R SKR  +T DDVN AL +R+VE LYG+ +                    G        DR ++  E+  A L K P++   M HWLA++G QP IP+N         P  ++            +D+       +  LS E Q Y +++ E ++  +D    L  VF SL  D GL  ++P+  +FI +                    G + L  L++LMR AR +LLN H H      ++MP+ +T L+   LG    ++  HW LRD TA ++A++C+R+G A+ NLQ  V   L  A    D K  A+   YGA+ G+  LG  ++  ++LP L  +  +L      S    +  +R EA+R    L  AAG+
Sbjct:    3 IVPKETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDDVNTALSLRNVEPLYGFASG----------DPLRFRRAVGHSDLFFIDDRELDCKEITEAPLTKAPLDTAVMAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLKLPV---KHVLSRELQLYFEKITELIVTGAD-DVLLKDVFASLATDSGLHPLVPYFTQFIADEVTR----------------GLNDLPLLFSLMRVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVN--HWELRDFTATLIAFICKRFGHAYYNLQTRVTKTLLHAFL--DPK-RAMTQHYGAVKGIAALGSKLVRLLILPNLE-VYINLLLPEMSSQDQANELKRYEAIRVYGALQAAAGN 390          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A1Y1VM90_9FUNG (DUF1546-domain-containing protein n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VM90_9FUNG)

HSP 1 Score: 162 bits (410), Expect = 4.110e-41
Identity = 121/391 (30.95%), Postives = 196/391 (50.13%), Query Frame = 0
Query:   19 VSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGE---QELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARR-EEALRC 401
            VS+  A+ LA   EY ++++ +EA K  R S R  +T  D+NYAL +R+VE +YG  +   +                G+D   A  D  ++  ++ N  LP  P++ T   HWLA++G QP IPQNPS Q+           ++ + +   + +     LS+E + Y +++ E+V+ SSD +     VFDSLK+DPG+ +++P+  +FI E                     R  L  L+++M+    +L N H +      ++MP+ +T ++   LG       DHW LRD  A +VA +C+++G A+  LQ  V   L  A+      G    T YGA++G+  LG  +I  ++LP+++P     SA +   +KSG    R EEA RC
Sbjct:   24 VSDSAAKLLAQDVEYRIREIAEEARKFMRHSHRDILTTSDINYALRVRNVEPMYGLNSKEEL----------RFQPIVGQDIYYAD-DEELSLDDLINTLLPPVPLDVTFTGHWLAIEGVQPAIPQNPSPQEIEILKKQASNDKLLLQQDKSSNDIVQNMLSKELRIYYEKLTESVV-SSDETLQQA-VFDSLKQDPGIHQLVPYFVKFIIENVTK----------------NRKNLQVLWSVMKMIGSLLENTHIYMEPYLHQLMPSILTCVVTKHLGEKAS--EDHWALRDYAASLVALICKQFGSAYHTLQPRVSKTLLHAIMDP---GKPFTTSYGAIIGLSLLGEEVIRVLILPIIKPF----SARIENEIKSGSKPSRIEEAKRC 376          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A1Y1HNQ6_KLENI (Transcription initiation factor TFIID subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HNQ6_KLENI)

HSP 1 Score: 163 bits (413), Expect = 1.000e-40
Identity = 126/426 (29.58%), Postives = 203/426 (47.65%), Query Frame = 0
Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP----------SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHE----MEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVV-LMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGS 411
            ++S+ +I   A +L +  + ++VA+ LA   EY ++++ QEA+K  R SKR  +T DDVN AL +R+VE LYG+ +                    G        D+ ++  E+ +A LPK P++ T + HWLAVDG QP I +NP           +++         A E   +   P  +  +S+E Q Y +++ E V   +D S  L     SL  D G+  ++P+  +FI++  Q  +                H L  L+ LMR A  +L N H H      +++P+ +T L+   LG   +    HW LRD +A IVA +C RYG ++ N+Q  +   ++   L  K       P  YG++ G++ LG  ++  ++LP L      L   +    K  D  RR EA R   +L +AAG+
Sbjct:    3 LVSKNSIQVAAQSLGIPNLGDEVAQALAPDVEYRIREICQEAIKCMRHSKRSTLTTDDVNSALSLRNVEPLYGFSSD----------DPLRFRKALGHSDLFYLDDKELDFSEIIDAPLPKPPIDTTVIAHWLAVDGVQPAIQENPPPGAELTLPTEQKKKIEGQPGLGAPEDLPVEVKPAVKHVISKELQLYFEKIMELVTSGTD-SKLLNDAVRSLASDSGIHPLVPYFIQFIQDEVQRSL----------------HDLPLLFTLMRVAEALLANPHVHIEGYLQQLIPSVVTCLVARRLGGRKN-GYRHWDLRDFSATIVATICHRYGHSYSNIQPRLTKTLVNSFLNPKQ----TYPQHYGSIKGLVALGNRVVRLLVLPNLATYLELLREDLDPQ-KQKDEVRRYEAQRVYGLLQVAAGN 395          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A485KP26_9STRA (Aste57867_9761 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KP26_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.210e-40
Identity = 125/423 (29.55%), Postives = 206/423 (48.70%), Query Frame = 0
Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP---SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLND----HFHEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAGSFAVQQ 416
            ++  ++IA +A ++ +  +S   A  LA   E+ L++++Q+AMK    ++R R+T  D+N+AL  R++E LYGY A                       G   T D  V   ++ NA LP CP+EP+  +HWLAV+G QP+IP+N    S            A   DV R  P  +  L++E Q Y ++V EA+   +D        F SL +DPGL ++LP+  +FI +                  K  +  L  L +++R ARC+L N       +  +++P+ +T +L   L  +     DHW +R   A ++A +C+R+G ++ N+Q  V     +A        T   T YGA+VG + LG  ++  +L P +    A L   ++ +  + ++ +R EAL CV +L  AAG +   Q
Sbjct:    3 VLREESIAVIAQSIGLDNLSKGCAAELAPEIEFRLREIIQDAMKFKSHARRDRLTTKDINHALSTRNMEILYGYGAGTGNVTFRKI-----------SPGLYVTDDPEVPVADILNAPLPVCPLEPSVHMHWLAVEGVQPKIPENDVDDSSTATYITSISDPAFTGDVQR-KPLVKHVLTDEMQLYYEKVTEAI--KADDFNRQQAAFASLTKDPGLHQLLPYFSKFIYDEV----------------KNSQRDLVLLTSILRMARCLLSNQSLRIELYLEQLIPSILTCVLNRQLCENPA--DDHWAVRKSAAHLMAQICQRFGDSYENIQLRVSKTYHDAFLDPTRPFT---TQYGAIVGCLYLGPLVMETLLFPHVASYLARLEPTMSPT--NPNLVQRLEALHCVGILQHAAGQYMAMQ 388          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A7J7C9A9_TRIWF (Transcription initiation factor TFIID subunit 6 isoform X1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C9A9_TRIWF)

HSP 1 Score: 162 bits (411), Expect = 2.080e-40
Identity = 127/416 (30.53%), Postives = 198/416 (47.60%), Query Frame = 0
Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXA--GEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRCVAVLTLAAG 410
            ++ ++ I  +A ++ +  +S DVA  LA   EY +++++QEA+K  R S+R  +TADDV+ AL +R+VE +YG+ +                   AG        D+ V   +V  A LPK P++ +  +HWLA+DG QP IP+N   +             G + V    P  +  LS E Q Y D++ E  ++  D S        SL  D GL  ++P+   FI +     +                    +L+ALMR AR +LLN H H      ++MP+ +T L+   LG    I  +HW LR+  A +VA +C+R+G  + NLQ+ V   L  AL        +LP  YGA+ G+  LG  ++  ++LP L P    L   +    +  ++ +R EA R    L  AAG
Sbjct:    3 IVQKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSRRTTLTADDVDSALNLRNVEPIYGFASG----------DNLRFKRAAGHKDLFYVDDKDVEFTDVMEAPLPKAPLDTSIAVHWLAIDGVQPLIPENAPVEALSDGKISEYKEDGGLPVDVKLPV-KHVLSRELQLYFDKITELTVKRPD-SVVFKQALVSLATDSGLHPLVPYFTCFIADEVTRNLSNFP----------------RLFALMRVARSLLLNPHIHIEPYLHQLMPSIITCLVAKWLG--NRISDNHWELRNFAANLVASICKRFGHVYHNLQSRVTKTLLHALLDAT---KSLPQHYGAIQGLAALGPSVVRPLILPNLEPYLQLLEPEMLLERQKNEM-KRHEAWRVYGALIYAAG 384          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A2I0L9T5_PUNGR (TAF domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0L9T5_PUNGR)

HSP 1 Score: 158 bits (399), Expect = 2.140e-40
Identity = 113/367 (30.79%), Postives = 180/367 (49.05%), Query Frame = 0
Query:    1 MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQ---LYALMRAARCVLLNDHFHEM----EIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLG 360
            ++ ++AI  +A ++ +  +S DVA  +A + EY L++++QEA+K  R S+R  +T++DV+ A ++R+VE +YG+ +                   AG        ++ V   +V +A LPK P+E     HWLA++G QP IP+NPS +             I +    P  +  +S E Q Y D+++E  L  SD S        SL  D GL  ++P+I  FI +                      H L +   L+ALMR  R +L N H H      ++MP+ +T L+   LG    +  +HW LR+ +A +VA +C+R+G A+ NLQ+ V   L  A    +     LP  YGA+ G+  LG
Sbjct:    3 VVPKEAIEVIAQSIGINKLSPDVAAAVAPAVEYRLREIMQEAIKCMRHSRRTVLTSEDVDSAFKLRNVEPIYGFTSG----------DPLRFKRAAGHKDLFYIDEKDVEFKDVIDAPLPKAPLEAAVTAHWLAIEGVQPAIPENPSAEGSDGKKYEFKEDGIPIDVKLPV-KHVISRELQLYFDKIKELTLSKSD-SIMFKQALLSLATDSGLHPLVPYITHFISDEIP-------------------HNLTKIPLLFALMRVIRSILQNPHIHIEPYLHQLMPSVITCLVTKRLG--IKLSDNHWDLRNFSASLVASICKRFGHAYHNLQSRVARTLLHAFLDPN---KTLPQHYGAIQGLAALG 333          
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Match: A0A077WT57_9FUNG (TAF domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WT57_9FUNG)

HSP 1 Score: 160 bits (405), Expect = 3.270e-40
Identity = 123/412 (29.85%), Postives = 196/412 (47.57%), Query Frame = 0
Query:    4 RQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSKRRRVTADDVNYALEMRSVEALYGYRASAVVAAVAXXXXXXXXXXXAGEDGDSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNP----------SRQQXXXXXXXXXAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAGLGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNXXXXXXXXXKGGRHALWQLYALMRAARCVLLNDHF----HEMEIMPAAMTVLLCATLGPDTDIDSDHWTLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLYGAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALRC 401
            ++ +  +  +L +  + +D A  LA   EY + +L+QEA K  R SKR R+T DD+N AL  ++VE LYGY  S                  A  D    T D  ++   + +  LPK P++ T   HWLA++G QP IPQNP          S++          + ++DV    P  +  LS+E Q Y +R+ EAVL   +R       F+SL+ DPGL ++LP+  + I ++     K                 L  L A++  A  +L N H     +  +++P  +T L+  T+  D     DHW +R   A ++A +CR+YG+A+  LQ  +   L  AL         L T YGA++G+  LG  +   ++LP ++   AH    +  +L +G+  R +EA +C
Sbjct:    6 KETVKNIGESLGITNLKDDAASALAQDVEYRVHELIQEATKFMRHSKRTRLTVDDINSALRAKNVEPLYGYACSGT--------PKFRKTSVANTD-VYFTQDDELDFDTILSKPLPKIPLDVTFTAHWLAIEGVQPAIPQNPTPGDAKADLLSKRSKSHGGTSALSDQVDV---KPLVKHVLSKELQMYFERITEAVLSEDERLRS--QAFESLRMDPGLHQLLPYFVQHIHKKVTQNHKD----------------LDVLDAMLSMAHSLLNNQHLFVEPYLHQLIPPIITCLVGRTISEDPF--QDHWAVRRRAASLIANICRQYGKAYHTLQPRIAKTLVRALLDPS---RPLTTQYGAIIGLDALGTEVTRVLVLPHIKFFSAH---CLENALTNGNPQRVQEAEKC 379          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351551 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRS7_9STRA0.000e+0100.00TAF domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5KPB7_9PHAE1.500e-4235.18TAF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6A5C846_NAEFO3.270e-4228.80TAF domain-containing protein n=2 Tax=Naegleria Ta... [more]
D8RG19_SELML1.740e-4130.19TAF domain-containing protein n=2 Tax=Selaginella ... [more]
A0A1Y1VM90_9FUNG4.110e-4130.95DUF1546-domain-containing protein n=3 Tax=Neocalli... [more]
A0A1Y1HNQ6_KLENI1.000e-4029.58Transcription initiation factor TFIID subunit n=1 ... [more]
A0A485KP26_9STRA1.210e-4029.55Aste57867_9761 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7J7C9A9_TRIWF2.080e-4030.53Transcription initiation factor TFIID subunit 6 is... [more]
A0A2I0L9T5_PUNGR2.140e-4030.79TAF domain-containing protein n=1 Tax=Punica grana... [more]
A0A077WT57_9FUNG3.270e-4029.85TAF domain-containing protein n=1 Tax=Lichtheimia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainSMARTSM00803TAF_clscoord: 6..66
e-value: 6.6E-12
score: 55.6
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainPFAMPF02969TAFcoord: 2..63
e-value: 2.7E-13
score: 49.9
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..65
e-value: 1.0E-14
score: 56.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..74
IPR046344TAF6, C-terminal HEAT repeat domain superfamilyGENE3D1.25.40.770coord: 173..393
e-value: 5.3E-34
score: 119.5
IPR011442TAF6, C-terminal HEAT repeat domainPFAMPF07571TAF6_Ccoord: 281..372
e-value: 2.1E-13
score: 50.3
IPR011442TAF6, C-terminal HEAT repeat domainCDDcd08050TAF6Ccoord: 174..408
e-value: 1.79784E-44
score: 153.953
NoneNo IPR availablePANTHERPTHR10221:SF9TAF6-LIKE RNA POLYMERASE II P300/CBP-ASSOCIATED FACTOR-ASSOCIATED FACTOR 65 KDA SUBUNIT 6Lcoord: 2..458
IPR037796Transcription initiation factor TFIID subunit 6PANTHERPTHR10221TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6coord: 2..458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:349796..361825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351551mRNA_12055Tribonema minus UTEX_B_3156 mRNAContig_93 349796..361897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351551|estExt_Genemark1.C_Ctg_930053 ID=Trimin1|351551|estExt_Genemark1.C_Ctg_930053|Name=jgi.p|Trimin1|351551|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=505bp
MISRQAIAPVAAALAVGPVSNDVAEFLASSAEYHLKDLVQEAMKIARRSK
RRRVTADDVNYALEMRSVEALYGYRASAVVAAVAAATDKGGAGGGAGEDG
DSATGDRRVNTLEVANAGLPKCPVEPTCMLHWLAVDGRQPRIPQNPSRQQ
RAAAAAAAAAGEIDVIRGAPTGEQELSEESQRYLDRVREAVLRSSDRSAG
LGPVFDSLKRDPGLQEILPHICRFIKERTQACVKGNERTQACVKGKGGRH
ALWQLYALMRAARCVLLNDHFHEMEIMPAAMTVLLCATLGPDTDIDSDHW
TLRDMTAGIVAYVCRRYGQAFPNLQADVVLMLGEALKRKDFKGTALPTLY
GAMVGVITLGFHIIAAVLLPLLRPLQAHLSAAVAQSLKSGDVARREEALR
CVAVLTLAAGSFAVQQQERLIQGLPASMVALSAGASATAVAQLSDGIAAV
KEVFGGTVLEPFLRTAAARCHQDTSDLCASCDSLMLEPAIRRSRQPPAAP
LLLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004823TAF_TATA-bd_Histone-like_dom
IPR009072Histone-fold
IPR046344TAF6_C_sf
IPR011442TAF6_C
IPR037796TAF6