mRNA_12021 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A835YHK4_9STRA (Mate-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHK4_9STRA) HSP 1 Score: 888 bits (2295), Expect = 0.000e+0 Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 3
Query: 81 MRWLTVVLTVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARAALPQSFLAIMWGFQXXXXXXXXXXPKSVKPVQSRPLAFQVLMVGRFVILARRYLSSRDARKGWWHLRAKVARSN 1736
MRWLTVVLTVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARAALPQSFLAIMWGFQXXXXXXXXXXPKSVKPVQSRPLAFQVLMVGRFVILARRYLSSRDARKGWWHLRAKVARSN
Sbjct: 1 MRWLTVVLTVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARAALPQSFLAIMWGFQXXXXXXXXXXPKSVKPVQSRPLAFQVLMVGRFVILARRYLSSRDARKGWWHLRAKVARSN 552
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A7S1XFH8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFH8_9RHOD) HSP 1 Score: 252 bits (644), Expect = 5.680e-74 Identity = 192/528 (36.36%), Postives = 265/528 (50.19%), Query Frame = 3
Query: 105 TVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASP-LHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARAALPQSFLAIMWGFQXXXXXXXXXXPKSVKPVQSRPLAFQVLMVGRFVILARRYLSSR 1685
T R D EI IA PA AT+ ++P+MSMVD AFVGRLG LG VG+A + +F+ SMF FL + TP+VA + G+PD SR+++ +WVA G +A L F LVS G+ AS + A+ Y+R R A PA+L Y +GAFRGF DT+TP+ +++IAN+V+L D +I WGV GAA AT SQ+ +A GL+ V ++ + L + P L + + S+ S+R+++IL +LA++ AA LG+V SAA+ I RQ WMF +ALD+ VAA +VA+ L A D R + ++RLLQLGL+ LGV++ R IP +FT+DP V+A + P+F L +P+ GLVFV+DGIFAAA DYK+ A V AG A C LL LA +W ++ VL V R +L RYLS R
Sbjct: 9 TFRPWRGDAEIARIAGPALATMTIDPLMSMVDTAFVGRLGVHALGAVGVAAALFKFSFSMFNFLAKTTTPLVARARVRGEPDRASRTIAQNIWVATMAGIIIATALGIFTRPLVSILVGSSPASQQMIDPAIRYVRWRLPAAPAILLTYVCSGAFRGFKDTQTPMYIAVIANIVHLALDYLMIFVFHWGVTGAALATAFSQILTAAGLILFMVRRKMLFLHDMVTKPDRETLSE-------------------IAASSIFSIRTMSILSAHTLASSLAARLGSVSSAAFAIGRQVWMFMAIALDSFEVAAQTMVAEKLGAGDRRGARKV-------------------------------------------------ASRLLQLGLVAGALLGVIVMVARSRIPLIFTSDPEVVALTSRVFPVFTLFQPISGLVFVYDGIFAAARDYKHTATAVFFAGLA-CVTSLLFCTNFTSLGLAGIW------------------------MSLNVLTVSRAFLLGARYLSRR 443
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: D7CWB4_TRURR (MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) TaxID=649638 RepID=D7CWB4_TRURR) HSP 1 Score: 222 bits (565), Expect = 1.110e-62 Identity = 179/471 (38.00%), Postives = 243/471 (51.59%), Query Frame = 3
Query: 108 VRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAA-GGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAG----RHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLL 1505
+R N +D +I +A+PA TLA +P++S+VD AFVGRLG+ L +G+ + A +F FL TP+VA S+ GD +A R+V AL +A GG A+A L L AP L +G + P A+ YLR+RALA PA+L A GAFRG+ DTRTP +++ NLVN+ D I G GWG+AGAAWATV +Q A ALG FVW R R L S AL + V G L VR+ A+L T +LATA A +G + AA+++ Q W+F + +DALAVAA ALVA+ A R RA+ +R+L + +G++LAAG +PR+FT+DPAV+ A P AL +PL LVFVWDG+ ED++Y+A +A +AACGAL+L
Sbjct: 5 LRVNPYDRDILALALPALGTLAADPLVSLVDTAFVGRLGSVPLAALGVNTALFSLAFVVFNFLAYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEELVGP----ALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGFGWGLAGAAWATVVAQWAGALG----FVWVLFARRRALGI--SVALPRF-------------AELRPFVRVGWELLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRGAGQPLRARAVADRLLA-----------------------------------------------------WGFGVGLVLAAGFALFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLA--LAMLVSAACGALVL 397
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A520PPV2_9DELT (MATE family efflux transporter n=1 Tax=Sandaracinaceae bacterium TaxID=2510337 RepID=A0A520PPV2_9DELT) HSP 1 Score: 218 bits (555), Expect = 3.010e-61 Identity = 167/454 (36.78%), Postives = 230/454 (50.66%), Query Frame = 3
Query: 144 IAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLL 1505
+A+PA LA +P++S+VD AFVGRLG A+LG +G+ + A +F FL TP+VA ++ GD A SR AL +A G AAL+L A + + G A+ L A A+ YLR+RALA PAVL G FRG+ DTRTPL V++ NLVNL D LI GLGWG+AGAAWAT +Q A AL V +++ + L R P A + H R G L++R+L++L F+ ATA AA LG + AA+++ Q W+F ++ +DALAVA ALV AL D A R + +N LL+ GL AL L A H +PR+FT++ VIA A + +P+ LVFVWDG+F A+D++++A + + ACG L L
Sbjct: 10 LAIPALGALAADPLVSLVDTAFVGRLGPAQLGALGVCASVFGLAFFVFNFLATGTTPLVADAVGRGDRSAASRVTMSALSLAVVAGVG-AALVLELAAEPILSLMG--ASGELRAPALAYLRVRALAAPAVLLVTVGHGVFRGYHDTRTPLWVTLGLNLVNLALDPLLIFGLGWGIAGAAWATTLAQWAGALVFVWLLLFRARETLGIERAWPRLADVTHLAR------------------VGGALALRTLSLLLVFTYATAVAARLGTLDVAAHQVAAQIWLFLSLVVDALAVAGQALVGSALGRGDRAEARHV-------------------------------------------------ANMLLRWGLGLGLALAALFALLAHPLPRLFTDEADVIARVADVYVFVVVSQPIGALVFVWDGLFQGAQDFRFLAVQMIVSALTACGILAL 393
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A6C1NP02_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6C1NP02_9BACT) HSP 1 Score: 214 bits (544), Expect = 1.600e-59 Identity = 173/482 (35.89%), Postives = 226/482 (46.89%), Query Frame = 3
Query: 111 RRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARAALPQSF--LAIMWG 1550
R FD EI +A+PA LA +P++SMVD AFVGRLG L +G+ + +F FL TP VA ++ GD R V AL +A G ALLL A ++S T L A+ YLRIRALA PAVL A G FRG DTRTPL +++ N+VNL D LI GLGWG+ GAAWATV +Q A AL V R+ L + P PA L + G L +R+ A++GT +LATA A +G AA+++ Q WM + +D+LAVAA A+V + R D +R ++NRLL G L L +PR+FT+DP + A AA LP +PL LVFVWDGIF AED++Y+A + + AA G LLL LP + + WG
Sbjct: 8 RGRRFDREITALAIPALGALAADPLVSMVDTAFVGRLGTVPLAALGVNASVFAMTFVVFNFLAYGTTPRVARALGRGDRGEVGRVVLQALVLAVAAGVVATALLLALAGPILSVMGAT---GELREPAMAYLRIRALAGPAVLLIMAGHGVFRGLQDTRTPLRITLALNVVNLVLDPILIFGLGWGLEGAAWATVVAQWAGALAFVRLIFGPRRAMLGESPRWPRPAEL------------------LPFLRVGGELLLRTGALIGTLTLATAVATRVGTAQVAAHQVAVQLWMLLALVVDSLAVAAQAMVGK-YRGADESR--------------------------------------------EGVAVLREVTNRLLLWGAGVGVVLLGLFWVAAPWLPRIFTDDPLTLLAVAAVLPFVVFMQPLNALVFVWDGIFMGAEDFRYLAVQMVLSALAAAGILLLV---LPMGWGLAGVWWG 420
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A2T2UF33_9BACT (MATE family efflux transporter n=3 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2T2UF33_9BACT) HSP 1 Score: 207 bits (527), Expect = 5.570e-57 Identity = 172/479 (35.91%), Postives = 228/479 (47.60%), Query Frame = 3
Query: 117 NEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRH-LRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARAALPQSFLAIMWG 1550
+D +I +AVPA TLA+ P++S+VD AFVG+LG L +G+ + A +F FL + TP VA++ GD + R+V AL +A G G A +L AP ++ A L A+ YLRIRALA PAVL A GAFRG+ DTRTPL VS+ N VN D LI GLGWG+ GAA AT +Q ALG + + +R+ L L P ALL W L+ R+LA+ GT +LATA AA +G AA+++ Q W F + +DALAVAA ALVA+ L RA+ +NRLL +G ALGV + +P +FT+DPA A +P AL +PL LVFV DG+F ED+ Y+A + A+ A A LLL L + WG
Sbjct: 6 TRYDRDILALAVPALGTLAVGPLVSLVDTAFVGQLGRVPLAALGVNASVFSLAFIVFNFLAYATTPRVASAYGRGDLEEAGRTVVQALMLATGLGLAATLVLEAGAPLILRAMG---AGGDLMTPALRYLRIRALAGPAVLLVLAGHGAFRGYQDTRTPLYVSLALNAVNAALDPLLIFGLGWGLTGAATATAGAQWTGALGFLWLLLGRRREALGVVLEWPRLRALLPFMKAGW-------------------TLASRTLALTGTMALATAVAARVGTAEVAAHQVAAQCWSFLALVVDALAVAAQALVARYLGENQPGEARAV-------------------------------------------------ANRLLVMGGAVGAALGVGFWLTQPVLPALFTDDPATTRLLLAVVPFVALMQPLNALVFVGDGVFLGLEDFSYLAKAMVASAAGAAAVLLLV-VPLGWGLAGVWWG 412
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A5J4Z3E4_PORPP (Protein DETOXIFICATION 43 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3E4_PORPP) HSP 1 Score: 210 bits (534), Expect = 7.710e-57 Identity = 166/473 (35.10%), Postives = 233/473 (49.26%), Query Frame = 3
Query: 96 VVLTVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARA 1514
+V +RN D +I +A+PA LAL+P++++ D A +GRLG+ LGGVGI+ + + ++F FL + TP +A GD SR+++ LW++A G ALL + Q+V+FF + +P AV YLR+R +A P L GAFRGF DT+TP ++I+AN VNL LI G G GV GA AT SQ+ GL V ++ + L L + P A L + +G++LSVR+ +IL T SLATA AA +G V SAA+E+ RQ W LDA++VAA +L+ L + R R + R+LQ LGL+F G+L G + +F+ DPAV+A AA P+ A EPL GLVFV DG F A + Y+AG + A A AL + RA
Sbjct: 132 LVTAFKRNPIDRDILRLALPAVGALALDPLVALADTALIGRLGSIALGGVGISNNVFNLSFTVFNFLGMATTPTIAQHYGRGDLAKASRTIARGLWISATVGLVAMALLSVASRQVVAFFGANELVAP---QAVRYLRMRLIAAPFFLGGMVCQGAFRGFQDTQTPFLMAILANTVNLSLFPLLIFGAGMGVQGAGLATALSQITLTSGLFILLVKKKMLNLTDLFRVPEFAKL------------------IPMLRTGAILSVRTFSILSTVSLATATAARMGNVESAAFEVTRQVWALFARLLDAVSVAAQSLIPVELGKKKYVRARQVSRRLLQVG---------------------------------------------FLLGLLFC---GILQGLGAK-MASIFSRDPAVVAMIAACFPLMAFFEPLNGLVFVLDGCFTAGRQFVYLAGAIFTASVCAWSALYVTRA 534
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A2T2TG51_9BACT (MATE family efflux transporter n=1 Tax=Bacteroidetes bacterium QS_8_68_15 TaxID=1919109 RepID=A0A2T2TG51_9BACT) HSP 1 Score: 206 bits (523), Expect = 1.870e-56 Identity = 170/464 (36.64%), Postives = 223/464 (48.06%), Query Frame = 3
Query: 117 NEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRH-LRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLL 1505
+D +I +AVPA TLA+ P++S+VD AFVGRLG L +G+ + A +F FL + TP VA + GD + R+V AL +AAG G +L AP ++ T L A+ YLRIRALA PAVL A GAFRG+ DTRTPL VS+ N VN D LI G GWG+ GAA AT +Q ALG + + +R+ L L P ALL W L+ R+LA+ GT +LATA AA +G AA+++ Q W F + +DALAVAA ALVA+ L A + + RA+ S RLL +GL LG + R A+P +FT+D A A P AL +PL LVFV DGIF ED+ Y+A + A+ A A L+L
Sbjct: 6 TRYDRDILALAVPALGTLAVGPLVSLVDTAFVGRLGRVPLAALGVNASVFSLAFIVFNFLAYATTPRVAGAYGRGDREEAGRTVVQALTLAAGLGLLATTVLEAAAPLILRAMGAT---GDLLTPALRYLRIRALAGPAVLLVLAGHGAFRGYQDTRTPLYVSLALNAVNAALDPLLIFGFGWGLTGAATATAVAQWTGALGFLGLLLVRRREALGIVLEWPRLRALLPFMRVGW-------------------TLASRTLALTGTMALATAVAARVGTAEVAAHQVAAQCWSFLALVVDALAVAAQALVARYLGADEPRKARAV-------------------------------------------------SRRLLVMGLAVGAVLGGAVWLLRPALPALFTDDAATTRLLLAVAPFVALMQPLNALVFVGDGIFMGLEDFSYLAKAMVASAAGAAAVLVL 398
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A2T2V6T3_9BACT (MATE family efflux transporter n=1 Tax=Bacteroidetes bacterium QS_8_68_28 TaxID=1919110 RepID=A0A2T2V6T3_9BACT) HSP 1 Score: 206 bits (524), Expect = 2.820e-56 Identity = 171/476 (35.92%), Postives = 232/476 (48.74%), Query Frame = 3
Query: 78 SMRWLTVVLTVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVAAGGGTALAALLLGFAPQLVSFFSGTQAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLL 1505
S R+L + L +D +I +AVPA TLA+ P++S+VD AFVG+LG L +G+ + + +F FL + TP VA + GD + R+V AL +AAG G A +L AP ++ A+ L A+ YLRIRALA PAVL A GAFRG+ DTRTPL VS+ N VN D LI GLGWG+ GAA AT +Q ALG F+W L +RQ + L+ RW + +G L+ R+LA+ GT +LATA AA +G AA+++ Q W + +DALAVAA ALVA+ L RA+ +NRLL +GL LG+ + +P +FT+DPA P AL +PL LVFV DG+F ED+ ++A +AA+ A A LLL
Sbjct: 28 SSRFLLIPLPSFTARYDRDILALAVPALGTLAVGPLVSLVDTAFVGQLGRVPLAALGVNASVFSLSFILFNFLAYATTPRVAGAYGRGDREEAGRAVVQALTLAAGLGLAATLVLEAAAPLILRAMG---ASGDLMPPALRYLRIRALAGPAVLLVLAGHGAFRGYQDTRTPLYVSLALNAVNAALDPLLIFGLGWGLTGAATATAGAQWTGALG----FLW-----LLLVRQREAKGLVLAWPRW---------RALLPFMKTGWTLAARTLALTGTMALATAVAARVGTAEVAAHQVAAQFWSLLALVVDALAVAAQALVARYLGEEKPREARAV-------------------------------------------------ANRLLVMGLAVGALLGLGFWGMQPFLPALFTDDPATARLVEKVFPFVALMQPLNALVFVGDGVFLGVEDFGFLAKAMAASAAGAAVVLLL 433
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Match: A0A7Y2IS79_9ACTN (MATE family efflux transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IS79_9ACTN) HSP 1 Score: 201 bits (510), Expect = 1.640e-54 Identity = 171/491 (34.83%), Postives = 233/491 (47.45%), Query Frame = 3
Query: 81 MRWLTVVLTVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAELGGVGIAGMILRFATSMFTFLVASITPIVAASIASGDPDATSRSVSGALWVA-AGGGTALAALLLGFAPQLVSFFSGT-QAASPLHAAAVTYLRIRALALPAVLCAYASAGAFRGFLDTRTPLAVSIIANLVNLGGDAALIMGLGWGVAGAAWATVASQVASALGLVTAFVWQRKVRLRHLRQPPSPALLKHRGRWWXXXXXXXXXXXXXXVLSGSVLSVRSLAILGTFSLATAQAAALGAVPSAAYEICRQAWMFCTMALDALAVAAVALVAQALRARDAARCRALCNRMLQRQCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPCLALSNRLLQLGLIFATALGVLLAAGRHAIPRVFTNDPAVIAAAAAALPIFALCEPLCGLVFVWDGIFAAAEDYKYVAGGVAAAGAAACGALLLARAALPQSFLAIMW 1547
MR V+ +RR +D EI +A+PA TLA +P++S+VD AFVGR+GA EL + IA I F+FL TP VA ++ GD D SR V+ A+ +A G ALA G + S + + + A P AV YLRIR ALPAVL A G FRGF DTRTPL +S+ NL+NL D LI G+G G+ GAAWAT+ +Q A+G + R L P+ A +K ++ G L VRS A++GT + ATA AA +G V AA+ + Q W+F + +DALA++A ALV + + D ALS RL+ +GL L V++ AG PR+F+ D AV++A L +PL + FVWDGI A+ ++ +A AGA A G LL A A+ W
Sbjct: 1 MRQTARVIGLRRTRYDREILALAIPALGTLAADPLVSLVDTAFVGRIGAVELAALAIAAAIFGVVFWAFSFLAYGTTPAVAHAVGDGDGDRASRVVAAAMTIALVAGFVALAGGQAGLRWMVESVMNASPEVAEP----AVDYLRIRLFALPAVLLITAGHGVFRGFQDTRTPLVLSLGLNLINLVLDPILIFGVGLGITGAAWATLVAQWMGAVGFIVVLA-VRSDELGVAVAWPTWADVK------------------GLLVVGGDLIVRSAALIGTLTFATAVAAGIGTVDVAAHHVAMQLWVFLALVVDALAISAQALVGKYRGSGD-------------------------------------------------HGVVAALSARLVGMGLYAGIGLAVVMGAGWSVFPRLFSTDAAVVSAVGGIYAFVVLMQPLNAVTFVWDGIAMGAQAFRLLAVSTVVAGATA-GVLLAIVGAADWPLSAVWW 418 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351530 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12021 ID=mRNA_12021|Name=jgi.p|Trimin1|351530|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1739bp|location=Sequence derived from alignment at Contig_93:85031..92891- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GGCGCGTGGTGTGTGTGTTCTGTGGTGCTACCTTCAGCATGCCTGATAGAback to top protein sequence of jgi.p|Trimin1|351530 >Trimin1|351530|estExt_Genemark1.C_Ctg_930015 ID=Trimin1|351530|estExt_Genemark1.C_Ctg_930015|Name=jgi.p|Trimin1|351530|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=553bp MRWLTVVLTVRRNEFDTEIRLIAVPAFATLALEPIMSMVDAAFVGRLGAAback to top mRNA from alignment at Contig_93:85031..92891- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12021 ID=mRNA_12021|Name=jgi.p|Trimin1|351530|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7861bp|location=Sequence derived from alignment at Contig_93:85031..92891- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_93:85031..92891- >mRNA_12021 ID=mRNA_12021|Name=jgi.p|Trimin1|351530|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1659bp|location=Sequence derived from alignment at Contig_93:85031..92891- (Tribonema minus UTEX_B_3156 )back to top |