Trimin1|153337|gw1.93.64.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|153337
Unique NameTrimin1|153337|gw1.93.64.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length176
Homology
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A835YIV1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIV1_9STRA)

HSP 1 Score: 345 bits (885), Expect = 4.380e-120
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
Query:    1 VWRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
            VWRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS
Sbjct:    1 VWRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A836CHG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG6_9STRA)

HSP 1 Score: 150 bits (379), Expect = 7.460e-39
Identity = 89/177 (50.28%), Postives = 110/177 (62.15%), Query Frame = 0
Query:    2 WRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPA--AAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
            WR + LAF LLLRASE+WAY+  G VHP FCV+A DV F    R +PA  A   +AD A   IR SKTDQ R G+   +TA  GG  DP+ + A ++ ALP  A    P ++VA  A  +  +   E   +IR+L  + G    Q GTHSMRVG ATTLAHAGVP RLI+ AG+WRS
Sbjct:  187 WRCILLAFHLLLRASELWAYNG-GHVHPHFCVRACDVQFALGARAVPAIQALSGSADRAFITIRASKTDQYRHGAVLTITATDGGPFDPLHVAAALLVALPPYAPPDCPTVTVAHGATDLRTITHGETTHMIRTLVAQHGGATSQLGTHSMRVGAATTLAHAGVPERLIKLAGQWRS 362          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A6H5KZQ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ1_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 7.730e-23
Identity = 67/183 (36.61%), Postives = 92/183 (50.27%), Query Frame = 0
Query:    2 WRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAA-----GGGLADPV---RIFADVVAALPAAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
            W G+AL++FLL RASE+WAYH+ GLVH DFC+  G++ F      L       AD      R SK DQ R G+            GG +A+ +    I  +++   P   +    + SV  + G    + R EA   +R +A R G +P  +  HS R+GGAT LA  G  G  IQ  GRW+S
Sbjct:  137 WMGIALSYFLLCRASELWAYHN-GLVHADFCLTRGNLVFFEGSCQLAWDERRRADRVEVTFRASKADQKRRGAIVTRERVMRDEEGGQMAEKIGALEILLNLLDVHPELGSTAPLMQSV--KQGRWAVVSRSEATAALRDMARRVGENPTHFALHSGRIGGATQLAKQGASGVQIQRVGRWKS 316          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A6H5KDK3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK3_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.080e-16
Identity = 65/180 (36.11%), Postives = 89/180 (49.44%), Query Frame = 0
Query:    1 VWRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGS--TAVLTAAGGGLADPVRIFADVVAALPA--AATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
            +W G+AL +FLL RASE++AY +DGLVHP+FC+    + F R    +       AD  +     SK DQ R G   T   +  G     PV  F  VVA L          PL++  T +G    + R E    +R +    GL+P  +  HS R+G AT +A  G+    IQ AGRW+S
Sbjct:  136 MWLGLALTYFLLCRASELFAY-ADGLVHPEFCLTRNSLTFYRGTERVGIEDRALADSVQVDFIASKGDQNRDGRSITRGRSPLGPDGEVPVGAFEAVVAILDVHPELPGNAPLLTRQTPSGW-RVITRTEGVAALRVMVESIGLNPAHFALHSGRIGAATQMAAQGLSALQIQHAGRWKS 313          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A6A3MMJ4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3MMJ4_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.110e-15
Identity = 64/186 (34.41%), Postives = 83/186 (44.62%), Query Frame = 0
Query:    1 VWRGVALAFFLLLRASEIW--AYHSDGLVHPDFCVQAGDVHFRRQ-GRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAG-------GIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
            VW  V LAFF L R+SE+W      D    P  CV+A DV  R Q G  L    G  A  A  I R  K DQ R G+T     +G  L  PV        A  A    +H   +   + G          A+++ E  + ++  A R  L+P  Y THS+R+GGA  L  AG    +I+  GRW S
Sbjct:   70 VWASVVLAFFFLSRSSEMWEPTKRDDLETAPTHCVRAADVVLRDQRGNVLDNRRGSAAS-AEIIYRSHKGDQRRQGTTVRHYRSGQRLPCPVE-------AAEACLRVRHQWQAAGKQLGIYLSSVSSATAIRKSEVSIFLKEAAKRLQLNPDDYATHSIRIGGACALLAAGKSELVIRLMGRWAS 247          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 9.030e-15
Identity = 63/189 (33.33%), Postives = 93/189 (49.21%), Query Frame = 0
Query:    2 WRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLT------------AAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGG-IGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAG-VPGRLIQAAGRWRS 176
            W  ++L++F + R+ E++A +S G+VHP  C+   DV F R  R L       AD      RG K DQ ++G     T            A GG +A        +VA+L   AT        + R+G  +  LK  +A   +R +  R G +P+ +  HS+R+GGA+TLA  G V  R+IQ  GRW+S
Sbjct:  238 WLCLSLSYFFITRSDEMFA-NSSGVVHPVHCLTRRDVAFFRGSRQLEYMHWQQADRVEIRFRGHKGDQGQIGDVRARTRDEVHGPRSGYRANGGAVAL-------MVASLSCHATLPDSAPLSSYRSGQEVKVLKYDQALRALREIVERSGRNPKDFALHSLRIGGASTLAAGGAVSERVIQREGRWKS 418          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A0M0JQ72_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQ72_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 3.300e-14
Identity = 61/176 (34.66%), Postives = 86/176 (48.86%), Query Frame = 0
Query:    4 GVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGG-LADPVRIFADVVAALPAAATAQH--PLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
             ++ AF  LLRA+E+ A       HP+  +   DV F            H A  A  ++R  K  +   G T  +  AGGG L DPV    ++ A  P     +H  PL  +  R G  G+L   +  + I++L    GLDP ++G HS+R+GGAT  A AGVP  +I+  GRW S
Sbjct:  155 ALSTAFCGLLRAAEM-ALQPGETWHPELNLSRADVKFHYDE--------HGAIYAVLMMRPCKNGKYMRGKTVPIVLAGGGTLIDPVSALWELYAGDPVPEAVEHVTPLFRLRGR-GTTGSLTVDQVRIEIKTLMSSLGLDPARFGAHSLRIGGATAAAAAGVPPSVIRVMGRWNS 320          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A6A4BWZ4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BWZ4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.520e-13
Identity = 61/175 (34.86%), Postives = 80/175 (45.71%), Query Frame = 0
Query:    1 VWRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGGIGA-LKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRW 174
            +W    + FF +L+ SE   Y +D     ++ +Q  DV FR     L       A  A    RG K DQ  VG+T  L  +G G   PV+    +V       T    L+   +    +G  L      L I+  A R GLDPR YGTHSMR GGAT +  AGV   +I+  GRW
Sbjct:   68 LWGAAVMGFFFMLKRSE---YLADNTRIKNYAIQCLDVSFRTTTVQLATTRAEAALVA-IHFRGGKADQKGVGATRTLGKSGVGWLCPVQACWTLVRLAKIRHTQDGELLCTTS----LGTPLTTAAMTLAIKQAASRAGLDPRAYGTHSMRSGGATAMFGAGVDRLVIKHFGRW 234          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A6G0SBC9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6G0SBC9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.180e-13
Identity = 63/186 (33.87%), Postives = 81/186 (43.55%), Query Frame = 0
Query:    1 VWRGVALAFFLLLRASEIW--AYHSDGLVHPDFCVQAGDVHFRRQ-GRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAG-------GIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
            VW  V LAFF L R+SE+W      D    P  CV+A DV  R Q G  L    G +A  A  I R  K DQ R G+T      G  L  PV        A  A    +H   +   + G          A+++ E  + ++    R  L+P  Y THS+R+GGA  L  AG    +I   GRW S
Sbjct:  158 VWASVVLAFFFLSRSSEMWEPTKRDDLETAPTHCVRAADVVLRDQRGNVLDNRRG-SAVSAEIIYRSHKGDQRRQGTTVRHYRTGQRLPCPVE-------AAEACLRVRHQWQAAGKQLGIYLSSVSSATAIRKSEVSIFLKEATKRLQLNPDDYATHSIRIGGACALLVAGKSELVIHLMGRWAS 335          
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Match: A0A6A4G4Z9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G4Z9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.790e-13
Identity = 59/178 (33.15%), Postives = 77/178 (43.26%), Query Frame = 0
Query:    1 VWRGVALAFFLLLRASEIW--AYHSDGLVHPDFCVQAGDVHFRRQGRPLPAAAGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAGVPGRLIQAAGRWRS 176
            VW  V LAFF L R+SE+W      D    P  CV+A DV  R Q   L      +A  A  I R  K DQ R G+T     +G  L  PV      +        A   L    +        ++ E  +L++  A R  L+P  Y THS+R+GGA  L   G    +I+  GRW S
Sbjct:  257 VWASVVLAFFFLSRSSEMWEPTKRDDLETAPTHCVRAADVVLRDQRGNLLDNHRGSAASAEIIYRSHKGDQRRQGTTIRHYRSGQRLLCPVEAAETCLRVRHQWQAAGKQLGIYLSSVSSATTNRKSEVSILLKEAAKRLQLNPYDYATHSLRIGGACALLATGKSELVIRLMGRWAS 434          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153337 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIV1_9STRA4.380e-120100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CHG6_9STRA7.460e-3950.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KZQ1_9PHAE7.730e-2336.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDK3_9PHAE3.080e-1636.11Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6A3MMJ4_9STRA5.110e-1534.41Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6H5KCI7_9PHAE9.030e-1533.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0M0JQ72_9EUKA3.300e-1434.66Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A6A4BWZ4_9STRA1.520e-1334.86Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6G0SBC9_9STRA2.180e-1333.87Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A4G4Z9_9STRA3.790e-1333.15Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 4..176
e-value: 2.0E-18
score: 68.8
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 6..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:548983..549510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|153337mRNA_12073Tribonema minus UTEX_B_3156 mRNAContig_93 548983..549510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|153337|gw1.93.64.1 ID=Trimin1|153337|gw1.93.64.1|Name=jgi.p|Trimin1|153337|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=176bp
VWRGVALAFFLLLRASEIWAYHSDGLVHPDFCVQAGDVHFRRQGRPLPAA
AGHTADEARFIIRGSKTDQLRVGSTAVLTAAGGGLADPVRIFADVVAALP
AAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSM
RVGGATTLAHAGVPGRLIQAAGRWRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz