mRNA_14602 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|172344
Unique NamemRNA_14602
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A836C872_9STRA (M20_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C872_9STRA)

HSP 1 Score: 639 bits (1648), Expect = 1.790e-231
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 1
Query:    1 MADNNSFSPCARLHLPHRSTPTLTARRPECTDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKIAAIALGSATTVPVSM 969
            MADNNSFSPCARLHLPHRSTPTLTARRPECTDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKIAAIALGSATTVPVSM
Sbjct:    1 MADNNSFSPCARLHLPHRSTPTLTARRPECTDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKIAAIALGSATTVPVSM 323          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: D7FM78_ECTSI (M20_dimer domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM78_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 9.400e-127
Identity = 197/295 (66.78%), Postives = 230/295 (77.97%), Query Frame = 1
Query:   67 LTARRP--ECTDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFT-GKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKIAAIALG 942
            L ARRP    T  +GPRVLFNSHIDTVPP+  A +   +DG+++I GRGACDTKGILAAQL ALQ L D G  D GLLYVVSEETDHSGM+ +N+LGL+P +++VGEPTGSKMMRLQKGMLK+RL C+GVACHSGYP LG SAIDPLV VL  +    WP+SEELG TT+NIGLV GGQAANALAE +EA +MFRL  EPE VL  VK+I    D  +++I++N+PV L VLP FE DVAAYNTDIAYF    G+ALLYGPGSIHHAHSR EKI  +E+  A++AY KIA   LG
Sbjct:   77 LYARRPGIPATRTEGPRVLFNSHIDTVPPFFGAEL-CDVDGEMIIKGRGACDTKGILAAQLLALQALADEGVDDIGLLYVVSEETDHSGMIKANELGLEPRYMIVGEPTGSKMMRLQKGMLKVRLSCRGVACHSGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVKAIAAEHDCAVEVISKNAPVSLEVLPDFEADVAAYNTDIAYFKLPKGRALLYGPGSIHHAHSRIEKIGVTELKDAVEAYKKIAKSCLG 370          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A4D9D6V3_9STRA (M20_dimer domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6V3_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.990e-97
Identity = 169/279 (60.57%), Postives = 200/279 (71.68%), Query Frame = 1
Query:  100 KGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGG-CSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNF---TGKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKI 924
            KGP+VL NSHIDTVPP+  A V+     + VI GRGACDTKGILAAQL A Q LV+ G  +D GLLYVVSEETDHSGM  +N L L P+FL+VGEPT SKM+R QKG+LK+RL   GV+CHSGYP LGKSAIDPLV  LQ L    WP +EELGATTLNIGL+ GG AANALA  AEATL+FRL   PE VL  V++ + G    +++IT N+PV+L  L G+ TDVA +NTDIAYF+    T +A L GPGSI  AHS  E I   E+  A+  Y +I
Sbjct:   86 KGPKVLLNSHIDTVPPFYSATVDRQ---NGVIRGRGACDTKGILAAQLLAAQRLVESGQAADLGLLYVVSEETDHSGMKQANSLNLRPNFLLVGEPTESKMIRSQKGLLKLRLLSHGVSCHSGYPSLGKSAIDPLVDALQDLKRAHWPQNEELGATTLNIGLLKGGHAANALAAEAEATLVFRLITPPEQVLETVRATV-GDRADVEVITANTPVQLNTLEGYATDVACFNTDIAYFDLREPTAQAFLMGPGSILDAHSDHELIQIPELQRAVAYYEEI 360          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A8K1C4Z1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4Z1_PYTOL)

HSP 1 Score: 304 bits (778), Expect = 2.270e-93
Identity = 160/276 (57.97%), Postives = 202/276 (73.19%), Query Frame = 1
Query:   91 TDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGC-SDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAY 915
            T  K P +LFNSH+DTVPP++PAR     DG   I+GRG+CD K ++AAQ+ A Q LV+ G  +D  +LYVVSEETDHSGM  +N+LGL P  L+VGEPT  KM++LQKG+LK+RL  KG+A HSGYP LG SAIDPL+ VL  L   KWP+SEELGATTLNIG+++GGQAANALAEHA A LMFRLT  P+ +L  V SI+ G  V +++ T N+PV L+V+ G++TDVA++NTDI YF F GKA L G GSI  AH   E I  +++   +D Y
Sbjct:  546 TGNKAPALLFNSHMDTVPPFLPART----DGQK-IYGRGSCDAKSLIAAQMIAAQKLVESGYENDVSVLYVVSEETDHSGMKKANELGLTPSHLIVGEPTKLKMIKLQKGILKVRLTRKGIAAHSGYPHLGDSAIDPLIDVLYDLKHEKWPSSEELGATTLNIGIISGGQAANALAEHASAMLMFRLTTNPDEILDRVNSIVNGR-VDVELYTSNAPVHLSVVDGYDTDVASFNTDIPYFKFDGKAYLVGAGSITDAHCSREYIDIADLETLVDFY 815          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: K3WGI3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGI3_GLOUD)

HSP 1 Score: 298 bits (763), Expect = 4.800e-91
Identity = 157/276 (56.88%), Postives = 196/276 (71.01%), Query Frame = 1
Query:   91 TDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGG-CSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAY 915
            T  K P +LFNSH+DTVPP++PAR     DG   ++GRG+CD K ++AAQ+ A Q LV+ G   D GLLYVVSEETDHSGM  +N+LGL P  +VVGEPT  KM+RLQKG+LK+RL  +G A HSGYP LG SAIDPL+ VL  L   +WP SEELGATTLNIG++NGGQAANA+ E+A A LMFRLT  PE ++  VK I+ G  V +++ T NSPV L V+ G+ETD+A++NTDI YF F G A L G G+I  AH   E I   ++   +D Y
Sbjct:  562 TGNKSPSLLFNSHMDTVPPFLPART----DGK-TLYGRGSCDAKSLVAAQMIASQKLVEAGFAEDVGLLYVVSEETDHSGMKKANELGLKPKHMVVGEPTDMKMIRLQKGILKIRLSRQGAAAHSGYPHLGDSAIDPLIDVLHDLKHEQWPNSEELGATTLNIGIINGGQAANAIPEYASAMLMFRLTTNPEKIMDRVKKIVSGR-VDIELYTSNSPVHLTVVEGYETDIASFNTDIPYFQFDGNAYLVGAGNITDAHCAREFIEIEDLRNLVDFY 831          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A3R7HS81_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HS81_9STRA)

HSP 1 Score: 292 bits (748), Expect = 6.010e-89
Identity = 148/276 (53.62%), Postives = 197/276 (71.38%), Query Frame = 1
Query:   91 TDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSD-AGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAY 915
            +D K P+++FNSH+DTVPPY+P R++     D  ++GRGACD K ++A Q+ A Q LV+ G  D   LL+VVSEETDHSGM  +N+L ++P+ L+VGEPT  KM R+QKG+LK++L   GVA HSGYP LG SAIDP++ VL  L    WP+SEE G+T LNIGL+NGGQAANALAE + A LMFRLT EP+V+   V+ I+ G  V M++ + N+PV+L V+ G++T VA +NTD+ YFNF GKA L G GSI  AH   E I+  ++   +D Y
Sbjct:  549 SDSKTPKLMFNSHMDTVPPYLPPRID-----DTTLYGRGACDAKSLIAGQMIAAQKLVEAGLGDDVQLLFVVSEETDHSGMKKANELNVNPEHLIVGEPTALKMSRIQKGVLKIQLTQNGVAAHSGYPHLGDSAIDPMIDVLYDLKKEAWPSSEECGSTDLNIGLLNGGQAANALAEESSAMLMFRLTTEPDVIYKRVEEIVAGR-VGMKLYSANAPVRLTVVEGYDTGVACFNTDVPYFNFDGKAYLVGAGSITDAHCPREFIMLEDLKGVVDYY 818          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A8J7U6M1_9BACT (M20/M25/M40 family metallo-hydrolase n=1 Tax=Acanthopleuribacter pedis TaxID=442870 RepID=A0A8J7U6M1_9BACT)

HSP 1 Score: 276 bits (706), Expect = 3.930e-88
Identity = 141/294 (47.96%), Postives = 197/294 (67.01%), Query Frame = 1
Query:   61 PTLTARRPECTDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKIAAIALG 942
            P + ARR    + K PR++FNSHIDTVPP+ PA +E        ++GRGACDTK ++AAQL A Q LV+ G  D  LLYVV EE DH GM+ +N+LGL PD+L+VGEPT SK++  QKG+LK+ L CKG A HSGYP  G+SA+DPL+ +L+++    WPA   LG TT+NIG++  G+AAN + +HA A ++FR+      +LA V+ + +   V +Q++  N PV+L  + G+ T V ++NTDI YF F GKA L+G GSI  AH+  EKI  +++  A+  Y ++A   LG
Sbjct:   50 PNVLARR----NAKQPRLVFNSHIDTVPPFFPATIENG-----TLYGRGACDTKSLIAAQLLAAQELVEAGRDDIALLYVVGEEVDHIGMIHANELGLKPDYLIVGEPTESKLVTRQKGILKLALTCKGKAAHSGYPHTGRSALDPLLDLLEKIRKHPWPAETRLGETTVNIGVLKSGKAANIVPDHAYAEVLFRVVTHQTELLAQVRDMADER-VEIQVVAANDPVELNTVAGYPTTVVSFNTDIPYFQFGGKAFLWGAGSITDAHTAGEKIEIADLEEAVHIYRRLAEQLLG 333          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A5D6Y8X3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8X3_9STRA)

HSP 1 Score: 290 bits (741), Expect = 5.790e-88
Identity = 151/264 (57.20%), Postives = 192/264 (72.73%), Query Frame = 1
Query:   91 TDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGG-CSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKI 879
            T  K P +LFNSHIDTVPP++PAR     DG   ++GRG+CD K ++AAQ+ A Q LVD G   D GLLYVVSEE+DHSGM  +N+LG++P  +VVGEPT  KM +LQKGMLK+RL  KGVA HSGYP LG+SAIDPL+ VL  L    WP+S+ELG TTLNIG+++GGQAANA+ + A A LMFRLT  P+ +LA V+ I+ G  V +++ T N+PV L+V+ G+ETD+ ++NTDI YF F G A L G G+I  AH   E I
Sbjct:  545 TGNKTPALLFNSHIDTVPPFLPART----DGT-TLFGRGSCDAKSLVAAQMLAAQQLVDAGYADDVGLLYVVSEESDHSGMKKANELGVNPRHMVVGEPTAMKMAKLQKGMLKLRLSRKGVAAHSGYPHLGESAIDPLIDVLHDLKHEPWPSSDELGTTTLNIGMISGGQAANAIPDFASAMLMFRLTTAPDEILARVERIVGGR-VDVELYTSNAPVHLSVVEGYETDIVSFNTDIPYFAFDGSAYLVGAGNITDAHCAREFI 802          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A7S1C340_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C340_9STRA)

HSP 1 Score: 276 bits (705), Expect = 8.670e-86
Identity = 154/283 (54.42%), Postives = 191/283 (67.49%), Query Frame = 1
Query:  100 KGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCS-----DAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTD-VTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFT--GKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKI 924
            + PR LFNSHIDTVPP+  A +    DG   I GRGACDTKG+LAAQL+A Q   +         + G+LYVVSEETDHSGM+A+N L L P  +VVGEPT SK++RLQKGMLK RL   GVA HSGYP LGKSAIDPLVA L  L  T WP+S ELG TTLN+G+++GGQAANA AEHAEA LMFR   +P  +LA+ +++    D V +  +T N P+ L V+ GF+T +A +NTDIAYF+      A L GPG+I  AH   E I   E+  A+  Y ++
Sbjct:  220 RSPRFLFNSHIDTVPPHFGATLSA--DGR-AIHGRGACDTKGVLAAQLSAAQAFAEAHAGTPMEREVGILYVVSEETDHSGMIAANALRLAPTAMVVGEPTESKLVRLQKGMLKCRLVSTGVAAHSGYPHLGKSAIDPLVAALGDLAKTAWPSSPELGDTTLNVGIISGGQAANATAEHAEALLMFRAISDPNELLAMTRAVAAKYDGVEVVPVTMNMPLTLGVVEGFDTGIACFNTDIAYFDLPEGSTAYLVGPGAITDAHCPREYINIKEMEDAVGLYRRL 499          
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Match: A0A225W002_9STRA (Formiminoglutamate deiminase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W002_9STRA)

HSP 1 Score: 282 bits (721), Expect = 5.100e-85
Identity = 143/276 (51.81%), Postives = 193/276 (69.93%), Query Frame = 1
Query:   91 TDLKGPRVLFNSHIDTVPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSD-AGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITAAIDAY 915
            +D K PR+LFNSH+DTVPPY+P R+++       ++GRGACD K ++A Q+ A Q LVD G  D   +L+VVSEETDHSGM  +N+L ++P  ++VGEPT  KM ++QKG+LK++L   GVA HSGYP LG SAIDP++ VL  L    WP +E+ G T LNIGL+NGGQAANALAE + A LMFRL  EP+V+   V+ I+ G  V+M++ + N+PV L  + G++T VA +NTD+ YFNF GKA L G GSI  AH   E I+  ++ + +D Y
Sbjct:  547 SDSKTPRLLFNSHMDTVPPYLPPRIDST-----TLYGRGACDAKSLIAGQMIAAQKLVDAGLGDDVQVLFVVSEETDHSGMKKANELNVNPAHMIVGEPTALKMSKMQKGVLKIQLTQDGVAAHSGYPHLGDSAIDPMIDVLYDLKKESWPTTEQYGNTDLNIGLMNGGQAANALAEKSSAMLMFRLVTEPDVIYKRVEEIVAGR-VSMKLYSANAPVHLTTVEGYDTGVACFNTDVPYFNFDGKAYLVGAGSITDAHCPREFIMLDDLKSLVDYY 816          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172344 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C872_9STRA1.790e-231100.00M20_dimer domain-containing protein n=1 Tax=Tribon... [more]
D7FM78_ECTSI9.400e-12766.78M20_dimer domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9D6V3_9STRA1.990e-9760.57M20_dimer domain-containing protein n=1 Tax=Nannoc... [more]
A0A8K1C4Z1_PYTOL2.270e-9357.97Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WGI3_GLOUD4.800e-9156.88Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7HS81_9STRA6.010e-8953.62Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A8J7U6M1_9BACT3.930e-8847.96M20/M25/M40 family metallo-hydrolase n=1 Tax=Acant... [more]
A0A5D6Y8X3_9STRA5.790e-8857.20Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1C340_9STRA8.670e-8654.42Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A225W002_9STRA5.100e-8551.81Formiminoglutamate deiminase n=1 Tax=Phytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_92contigContig_92:290977..295906 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|172344|e_gw1.92.10.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00064,RC00300,RC01151
KEGG ReactionR00669,R04420,R09107
KEGG ModuleM00028,M00034,M00845
KEGG Pathwayko00220,ko00270,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00270,map01100,map01110,map01130,map01210,map01230
KEGG koko:K01438,ko:K08963
EC3.5.1.16,5.3.1.23
GOsGO:0003674,GO:0003824,GO:0006508,GO:0006518,GO:0006575,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009636,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0042219,GO:0042221,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0070011,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1990748
Descriptionaminoacylase activity
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0624@1|root,KOG2275@2759|Eukaryota
Evalue1.54e-127
Seed ortholog2880.D7FM78
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase M20, dimerisation domain
Ec32 orthologEc-16_004770.1
TranscriptId172666
TrackFilteredModels1
ProteinId172344
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172344gene_14602Tribonema minus UTEX_B_3156 geneContig_92 290977..295906 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172344Trimin1|172344|e_gw1.92.10.1Tribonema minus UTEX_B_3156 polypeptideContig_92 290977..295906 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14602_1exon_14602_1Tribonema minus UTEX_B_3156 exonContig_92 290977..291231 +
exon_14602_2exon_14602_2Tribonema minus UTEX_B_3156 exonContig_92 292610..292742 +
exon_14602_3exon_14602_3Tribonema minus UTEX_B_3156 exonContig_92 293297..293457 +
exon_14602_4exon_14602_4Tribonema minus UTEX_B_3156 exonContig_92 294074..294241 +
exon_14602_5exon_14602_5Tribonema minus UTEX_B_3156 exonContig_92 295176..295275 +
exon_14602_6exon_14602_6Tribonema minus UTEX_B_3156 exonContig_92 295752..295906 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14602CDS_14602Tribonema minus UTEX_B_3156 CDSContig_92 290977..291231 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14602 ID=mRNA_14602|Name=jgi.p|Trimin1|172344|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=972bp|location=Sequence derived from alignment at Contig_92:290977..295906+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGATAATAACTCATTTTCACCCTGCGCGCGCCTGCATCTACCCCA
CCGCTCAACGCCAACCCTCACAGCCAGGCGGCCCGAGTGCACAGACCTCA
AGGGCCCGCGGGTGCTGTTCAACAGTCACATCGACACGGTGCCGCCATAC
ATACCTGCCCGTGTGGAGACAGCGCTCGACGGTGACTTGGTGATCTGGGG
CAGGGGCGCGTGCGACACCAAGGGCATACTCGCGGCGCAGCTGACGGCGC
TGCAGCACCTGGTGGACGGCGGCTGCAGCGACGCCGGCCTGCTGTACGTG
GTGTCCGAGGAGACAGACCACAGCGGCATGCTCGCCAGCAACGACCTCGG
CCTGGACCCCGACTTTCTGGTCGTGGGCGAGCCCACCGGCAGCAAGATGA
TGCGACTGCAGAAGGGCATGCTCAAGATGCGCCTGGAGTGCAAGGGCGTC
GCCTGTCACAGCGGCTACCCGCAGCTGGGCAAGTCAGCAATCGACCCCCT
TGTCGCCGTTCTGCAGCGGCTCAACGATACCAAGTGGCCGGCCAGCGAGG
AGCTGGGTGCCACAACGCTCAACATTGGACTGGTCAACGGCGGCCAGGCC
GCCAACGCGCTGGCGGAACACGCTGAAGCCACCCTTATGTTCAGGCTCAC
AGATGAGCCTGAGGTCGTACTCGCTATCGTCAAGAGTATATTGGAGGGCA
CCGATGTCACCATGCAGATTATCACTCAGAACAGCCCCGTCAAGTTGGCG
GTGCTTCCTGGCTTCGAAACAGACGTGGCGGCGTACAACACAGATATTGC
GTACTTCAATTTTACAGGCAAAGCGCTGTTGTACGGGCCCGGATCCATCC
ATCACGCCCATTCCCGCACAGAGAAGATATTGGGGAGTGAGATCACTGCC
GCCATCGATGCGTACACGAAGATCGCGGCGATAGCTCTTGGCAGCGCTAC
TACCGTGCCTGTGTCAATGTAA
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protein sequence of jgi.p|Trimin1|172344

>Trimin1|172344|e_gw1.92.10.1 ID=Trimin1|172344|e_gw1.92.10.1|Name=jgi.p|Trimin1|172344|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=324bp
MADNNSFSPCARLHLPHRSTPTLTARRPECTDLKGPRVLFNSHIDTVPPY
IPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSDAGLLYV
VSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGV
ACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQA
ANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLA
VLPGFETDVAAYNTDIAYFNFTGKALLYGPGSIHHAHSRTEKILGSEITA
AIDAYTKIAAIALGSATTVPVSM*
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mRNA from alignment at Contig_92:290977..295906+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14602 ID=mRNA_14602|Name=jgi.p|Trimin1|172344|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4930bp|location=Sequence derived from alignment at Contig_92:290977..295906+ (Tribonema minus UTEX_B_3156 )
ATGGCAGATAATAACTCATTTTCACCCTGCGCGCGCCTGCATCTACCCCA CCGCTCAACGCCAACCCTCACAGCCAGGCGGCCCGAGTGCACAGACCTCA AGGGCCCGCGGGTGCTGTTCAACAGTCACATCGACACGGTGCCGCCATAC ATACCTGCCCGTGTGGAGACAGCGCTCGACGGTGACTTGGTGATCTGGGG CAGGGGCGCGTGCGACACCAAGGGCATACTCGCGGCGCAGCTGACGGCGC TGCAGGTGAAATATGGAACCACTGAGCACTGAGGTGGTGTGTTGTACTTC TACTTGCCTGCTGGTGGGTGATGCTCATCTCGCTTATGTAGATATGCTCA GCGCTGTAGTGCTGCTGAGCTTTGTGGAGCGTGGCCTGTGGCGCTGCAGA TGAGGAGTGGTGCCGCTGCGCACGTATGTGACATTGTGACTACTTGTGGG TGGACGCTCATATCACTTTGGGATGCTCAGCGCTGTGATGCTGCTGAGAC TAACGGTGCCAGCTGACAATGCCGGGGGCGAGGGCTGTGCCGCTGAGCAC TGAGGTGGTGGCGTGCACATACTTTGATGCATACTGTTGGGCATATGGGT GATGCACAGCGCTGCGGTGCTGAGCATTGTGGTATCGTTGAGCGCTGTGC TGCTGCCCAGCACTTGCGAGTGCCGAGAGAGCCGCAGCGGCGCTGCTGCT GCAGCTGAGAGATATGGCACAGCTGAGCATCGCTGCAGAGCCTTGACGTG CGCCCGATTGCGGCTGGTGGCGTGATGAGTCGTTGACTTTGCTCGACTTG CATGAGCGAAGTGCAAGATTTGGCAATGTCATACTTCAAGTACAAACAGT TGCAGTTGGGAAGGCGCAGGTGCAGTGCTCTGGTGCACGGGCACCCATGG CGCCCTTCCAGGGCAGCACATAACACTGCAGGTGCCTGCCACAACTAGGC AGCTCTTGCACGTGGTTGCGCCGTTATCACAGGGTGTTGTTCGCGTTGGC GATTGCGCAGTGGTCAGCTCTCTGCGCAGTGTGCAGACTGACGCGGCCAT CTCTGGACCCAGGCGACAGTTTCAGCTTCTGGCCTACATTTTGCTGCACT TCGCAAGGCCTACATACACTGTGTTCAACGAAAGATTGTGAGAGAATATG GTGCTGGTCATTGCAAGCCCTACATCAATGTTGGCAAGGTGCGCATGAGA GGGTATGAACAACAACAGGATGGCGTCAAAAGTTTGAGCTGATCGGTTAT TGCTAACAAAGTGGTCGCTGGTTGAAGTTCGCCTGTTGACCTCCCTCCTT CCCCAGTGGGTGCCGCATGTGGGTCACCCAGGTCCCATCCTGCTGTTGCG ACTGGCCCCAGCAGATGCTCACGCTGTGCTCACTTGGAGGTGGTAGGCTC ATGTCAGTGCGCTTGCAGCTGCTTGCAGCACACCACAGCCATCAGCAGCA ACGCACTTTCACCCGCACTTGCACCTTCACGTCTACAAAGAGGCTAAAAC GTGCGTGCGTGTCGATCGTCCGATTGCGATAAGCTCCCAGCCGTTGCTGC CCCGCATGACACACACTTAAGGCGTAGCAGCGCTCAACACCTTGGCCGCG TAACTGACAGCGCCCCACACGCCGCTGCCGCAGCACCTGGTGGACGGCGG CTGCAGCGACGCCGGCCTGCTGTACGTGGTGTCCGAGGAGACAGACCACA GCGGCATGCTCGCCAGCAACGACCTCGGCCTGGACCCCGACTTTCTGGTC GTGGGCGAGCCCACCGGTGAGCAGCGCTCATTTGATTGCGATGGTGATTA CATGTGACATCTCGGCAGATGAGCATGGCGGTTTGTTGATGCCACGCGCC TTTTGGTACATGTGTACTGCGCCGCACTGTGTCATACTTTGCAATGGCAA TTACGCTAGGGTTGGACCCGGCTTTCTGGGGGGGGGGAGGGAGCTTTGAC CAGTGAGCAACGCTCAGGCGATTCTGATTGTGAATGGCATTGATGATTGG CGGTATGAGTGCTTGCTGACTCCTCTGGCTAGCCAGCTGGCGTGTTGCTC GATGCCGTGATATGACTATGTCACAAAGCTTTGACATTTTGCAGGCATCT GGCGGTGCCAGAGTGTCTCTCATGCATGCTGTGTACAGCACCACACCCAG GCTCCTACCAGCCTGACATCAGTGCGCTGTGCTCATGAAGTGGGATGCTG AAAACAACTTCTTTGGAATACGGACACTGTGCGGGGTGCCCTGACACTGT TGTGGGAGCGCTTGCCTCTGTTAACTCAGCTAACGCGCTCTCTGTCCCTG GCTGCTGCTCGTCCATGTAGGCAGCAAGATGATGCGACTGCAGAAGGGCA TGCTCAAGATGCGCCTGGAGTGCAAGGGCGTCGCCTGTCACAGCGGCTAC CCGCAGCTGGGCAAGTCAGCAATCGACCCCCTTGTCGCCGTTCTGCAGCG GCTCAACGATACCAAGTGGCCGGCCAGCGAGGTGACTCGTTGAACTTCAA CAGTGACTCTCCACCAGTGCTGCAAGACATCTCTTTTGAGATGAACGTAG TCGGTGGTGCTGCCAGACCTGCTGTCAGGATTGGCTGAGTGAGGCCCGAC TTGCTCAGGTCAATGATCACGCTTGCATGAATTGCTTGCGCAGCGTAGCC CTGCCCAATGTGGGTAGGAGCCGCTGTTGTTTTCATGCAACAAAACCATG TGGTGGTGGTGGTTGATACAGAAAGTCAAGCCTTGTACACAGTTGCACAG GGGCTGTCAGCTAACCCCTGTACATGTATGCAGCCTTCAACGCATGTCAC ACCCACGAACACGGTAGCGCCATGGACATCGACCATCCCTGAAACCAACT GTACCGATTGATCGACACGGGGCACACAATGCGGGCGGTTGCCATTAAAA CCGTATATGCATTGTGTCATATATATCAACGTACACACTGCGCGTACACG TGAAAGTATATTCATGACATATACTTCGAGGTACCAACTTCGAAGTACTT CGATGTAGTTGTATACATCAATGTACTTCACAGTATTACTTGGAGCATGC GTCTCACACTTTGATGTCCACCCTGCACGCGCACTCCGCCACGTCAGGAG CTGGGTGCCACAACGCTCAACATTGGACTGGTCAACGGCGGCCAGGCCGC CAACGCGCTGGCGGAACACGCTGAAGCCACCCTTATGTTCAGGCTCACAG ATGAGCCTGAGGTCGTACTCGCTATCGTCAAGAGTATATTGGAGGGCACC GATGTCACCATGCAGGTGTGTGTGCGCACAGCATATTTAAAGCACATTGT ACTGTCTGATTCTAAGTGTACATATCACTAACAAGTACATGCTGGAACAA ACACTCGGTCAAGGTGCGTTGCGGCACCATTCAAGAAATGTTTGGTTTGC TCAGAGTTTAAGCTGGTGGCTGGCCACAGTGAACCCGCACATGAATCTAA CTTCGTCAGCGGCATCTTTTGAAAGGGTCCTGGATGTAGGCCTGCATTTG TCGCTCGCTGTATGGTGGACACAGAGACTCGCTGCACACACCCTTATCTC ATTGCAGATTATCCGAGTACAGTAGGTAAGTAAATGGGTCAGGCGCATTT TTTTCATTGTCACTAGCCAATGACGATCACGGTGTCTGAGTGCAAAGACA CCAGTACTCAAGCGCACACAGCGTACATCTATACATTACACAAACTGAGC GCGGCCTGCCATGCGACAACCACAGACTACAGCAATATCATTGATGCAAT GATTACGCCGTTGACATTAGCATTTGTGCTTTTGCGTTGGTCTCTGAATA TCTATAGGCTCATATCTTGTGCGCCTGCAAGTGCATAACGCATGCAGATA CACCACCGCACTTGACACGTGTTGAAGGTCACTCATGTTCGATGCAGTGC TGCATCATGCACTTCAGACCCAGCAGTGCTTGTTGAATGATACGGGTTGC GCATGACATGAATTTCCCCTGTTGGTGATGGCATTGTGTTGTCCACCATA CCTTTCTTGTGTACACCTTGAGGGCATACTGATCTCTGCTGCCTTGTGAC ATGCGTTTCGTCCGCTTCACTTCATATGGCACAACCATATCGACTGTAAA TGTTGGCTACTGCCGCCATGAGTATCTGGCAGCCCCACTGACTTGAGCTG TCACGTGTGCCATGCTCATTTGTTGATTTGTGCCTTATTTGCTGCACAGA TTATCACTCAGAACAGCCCCGTCAAGTTGGCGGTGCTTCCTGGCTTCGAA ACAGACGTGGCGGCGTACAACACAGATATTGCGTACTTCAATTTTACAGG TATGCCCGGGAAGGCTACGTGAACTGCAATCTGGATGCATGCATGCATGT GGTCGCATCTCTGTGCTACTTGTCGATGCTGTGCCGGAGGGGGATGGGTC ATGTTATTCCTCGAGTGTTGCTAATGGTTGCGTCGAAGCATCGCACTTCG CATAATGCGAAGCTCACAGTGCAACAGAGCAAGGGCCTGCATGACCTGAG CGCTGTGATAGATGACTCGCCCGATCACTGTGCAACGCCTTGTTACTCCA ACAAGCCCTTGCCTTGCCTTCTTCTTGCATCCAAGCGATGGCATTGCCCT CAGCTATGTAGTCATTGTCGTGTAGCAACAGACCGCGCGGACTTCGCAGG CTCTCAGCCACGTGCCGCGCATCTTGTTTTTGGACAGAGCTCTGTCACAC AGTTTGTCTGCACTCATATATGTATGAGCAGCACTCGGCTCGGAGCTGAC AGCATTGTGTGTCTGTCGACTGCAGGCAAAGCGCTGTTGTACGGGCCCGG ATCCATCCATCACGCCCATTCCCGCACAGAGAAGATATTGGGGAGTGAGA TCACTGCCGCCATCGATGCGTACACGAAGATCGCGGCGATAGCTCTTGGC AGCGCTACTACCGTGCCTGTGTCAATGTAA
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Coding sequence (CDS) from alignment at Contig_92:290977..295906+

>mRNA_14602 ID=mRNA_14602|Name=jgi.p|Trimin1|172344|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=972bp|location=Sequence derived from alignment at Contig_92:290977..295906+ (Tribonema minus UTEX_B_3156 )
ATGGCAGATAATAACTCATTTTCACCCTGCGCGCGCCTGCATCTACCCCA
CCGCTCAACGCCAACCCTCACAGCCAGGCGGCCCGAGTGCACAGACCTCA
AGGGCCCGCGGGTGCTGTTCAACAGTCACATCGACACGGTGCCGCCATAC
ATACCTGCCCGTGTGGAGACAGCGCTCGACGGTGACTTGGTGATCTGGGG
CAGGGGCGCGTGCGACACCAAGGGCATACTCGCGGCGCAGCTGACGGCGC
TGCAGCACCTGGTGGACGGCGGCTGCAGCGACGCCGGCCTGCTGTACGTG
GTGTCCGAGGAGACAGACCACAGCGGCATGCTCGCCAGCAACGACCTCGG
CCTGGACCCCGACTTTCTGGTCGTGGGCGAGCCCACCGGCAGCAAGATGA
TGCGACTGCAGAAGGGCATGCTCAAGATGCGCCTGGAGTGCAAGGGCGTC
GCCTGTCACAGCGGCTACCCGCAGCTGGGCAAGTCAGCAATCGACCCCCT
TGTCGCCGTTCTGCAGCGGCTCAACGATACCAAGTGGCCGGCCAGCGAGG
AGCTGGGTGCCACAACGCTCAACATTGGACTGGTCAACGGCGGCCAGGCC
GCCAACGCGCTGGCGGAACACGCTGAAGCCACCCTTATGTTCAGGCTCAC
AGATGAGCCTGAGGTCGTACTCGCTATCGTCAAGAGTATATTGGAGGGCA
CCGATGTCACCATGCAGATTATCACTCAGAACAGCCCCGTCAAGTTGGCG
GTGCTTCCTGGCTTCGAAACAGACGTGGCGGCGTACAACACAGATATTGC
GTACTTCAATTTTACAGGCAAAGCGCTGTTGTACGGGCCCGGATCCATCC
ATCACGCCCATTCCCGCACAGAGAAGATATTGGGGAGTGAGATCACTGCC
GCCATCGATGCGTACACGAAGATCGCGGCGATAGCTCTTGGCAGCGCTAC
TACCGTGCCTGTGTCAATGTAA
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