Trimin1|338410|MIX47173_4_53 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338410
Unique NameTrimin1|338410|MIX47173_4_53
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length204
Homology
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: A0A836C7Y9_9STRA (Solute:Sodium symporter family (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y9_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 3.490e-142
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
Query:    1 DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIGAGVW 204
            DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIGAGVW
Sbjct:    1 DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIGAGVW 204          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: A0A835YRZ9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ9_9STRA)

HSP 1 Score: 330 bits (845), Expect = 1.310e-106
Identity = 162/203 (79.80%), Postives = 180/203 (88.67%), Query Frame = 0
Query:    1 DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIGAGV 203
            DSCCQ+ ACNIPCPAEWSP+A L  VYG +NV AI +YC+IG  FLW+VRGKVE YFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYK+AWFDGA L +GLG+SL+LN LL+ARHVN ACCLT+PDFYAR YGKLFEVLVSLVLCTSFI+LLAGNLVG GRIL FCF  + K GGV++AAALCASYTIGGGL+SV+ A V
Sbjct:   17 DSCCQKSACNIPCPAEWSPSANLAEVYGVANVCAIAVYCLIGFYFLWKVRGKVENYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKFAWFDGAALPIGLGVSLILNGLLLARHVNNACCLTLPDFYARKYGKLFEVLVSLVLCTSFISLLAGNLVGLGRILQFCFGGISKAGGVWVAAALCASYTIGGGLVSVVYADV 219          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: A0A835Z2T9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T9_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.200e-78
Identity = 122/201 (60.70%), Postives = 152/201 (75.62%), Query Frame = 0
Query:    3 CCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIGAGV 203
            CCQ   CNIPCPA+W P A L+T YG++ V +I+++C+ G+V    VRG +E+YFVAGR L L V TL LA Q IDSNA LG  D AYKY ++DGAV+ +GL  SL+LN LL+A+H+N A  LT+PDFYAR+YG LFEVLVSLVLCT+FI +LAGNLVG GR+L FC+  L + GGV  +A L ASYT+GGGL SV+  GV
Sbjct:   19 CCQHAVCNIPCPADWQPRASLDTFYGSAVVSSILLFCMTGIVVKANVRGMLEQYFVAGRGLGLLVTTLGLAAQCIDSNALLGTVDAAYKYNFWDGAVIPIGLTASLVLNGLLLAKHINAAHVLTLPDFYARTYGPLFEVLVSLVLCTTFICVLAGNLVGLGRVLQFCYGGLSQAGGVAASALLTASYTMGGGLKSVVYTGV 219          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: D7FZ36_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ36_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.200e-66
Identity = 111/198 (56.06%), Postives = 142/198 (71.72%), Query Frame = 0
Query:    1 DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSV 198
            D+C Q   C +PCPAEW+P A L  VYG + +V+I  +  IG+  ++ ++GKVE +FV GRSL LFV  L LA QSIDSNATLGNADLAYK+ ++DGAVL +GLGLSL++N L +ARH+N+A CLT+PDFY +++G   EVLVSL+ C SFI LLAGNLVG   I+ F F     T  VF+A  +   YT  GGL+SV
Sbjct:    3 DTCDQLDTCGLPCPAEWTPKADLVEVYGVAVIVSIAFFVSIGVATIFLIKGKVENFFVGGRSLPLFVIALTLASQSIDSNATLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATS-VFIAGIVTMIYTGAGGLLSV 199          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: A0A6H5KJW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW0_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.670e-61
Identity = 111/198 (56.06%), Postives = 141/198 (71.21%), Query Frame = 0
Query:    1 DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSV 198
            D+C Q   C +PCPAEW P A L  VYG + +V+I  +  IG+  ++ ++GKVE +FV GRSL LFV  L LA QSIDSNATLGNADLAYK+ ++DGAVL +GLGLSL++N L +ARH+N+A CLT+PDFY +++G   EVLVSL+ C SFI LLAGNLVG   I+ F F     T  VF+A  +   YT  GGL+SV
Sbjct:    3 DTCDQLDTCGLPCPAEWIPKADLVEVYGVAVIVSIAFFVSIGVATIFLIKGKVENFFVGGRSLPLFVIALTLASQSIDSNATLGNADLAYKFHYWDGAVLPMGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATS-VFIAGIVTMIYTGAGGLLSV 199          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: C1E525_MICCC (Solute:Sodium symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E525_MICCC)

HSP 1 Score: 191 bits (486), Expect = 1.170e-53
Identity = 103/198 (52.02%), Postives = 131/198 (66.16%), Query Frame = 0
Query:    1 DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSV 198
            +SCCQ   C IPCPA     A   + +G    + I  +C IGL   + V GK E +FVAGRSL LFV TL LA QSIDSNA LGNADL+YKY ++DGAVL +GLGLSL+LN + +A  VN+   LT+PD Y + YGK  E++ S+  C SF+ LLAGNLVG   IL + F+ + + G VFL+  +C +YT  GGL SV
Sbjct:   49 NSCCQMDVCAIPCPAAHPKPA---SGFGVGIGIMIAFFCAIGLGAFYFVGGKAENFFVAGRSLPLFVVTLTLASQSIDSNALLGNADLSYKYHFYDGAVLPIGLGLSLILNGIFLAHKVNEELVLTLPDIYGKKYGKAVEIVTSICTCCSFLCLLAGNLVGMSVILAYIFD-ISEVGAVFLSGIICLAYTACGGLFSV 242          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: K8FEG1_9CHLO (Solute:Sodium symporter family n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FEG1_9CHLO)

HSP 1 Score: 185 bits (470), Expect = 2.160e-51
Identity = 103/197 (52.28%), Postives = 133/197 (67.51%), Query Frame = 0
Query:    2 SCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSV 198
            SCCQ   C IPCPA        ++ +G   +  +V++C+IG+  ++ V GK + +FVAGRSL L V  L LA QSIDSNA LGNADL+YK+A+FDGAVL +GLGLSL+LNAL  A+ +N    LT+PD Y + YG   E++ SLVLC SF+ LLAGNLVG  +IL + F+ L  T GVFL+  +   YT  GGL SV
Sbjct:   69 SCCQMDVCAIPCPATVPKP---DSDFGIGVICVVVLFCMIGIGTVYFVGGKAKNFFVAGRSLPLPVVILTLASQSIDSNALLGNADLSYKFAFFDGAVLPIGLGLSLILNALFFAKKMNAEGVLTLPDVYGKRYGVATEIIASLVLCCSFLCLLAGNLVGMAKILAYLFD-LDITDGVFLSGIIILVYTACGGLFSV 261          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: A0A7S3K6Q6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6Q6_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.880e-49
Identity = 99/197 (50.25%), Postives = 130/197 (65.99%), Query Frame = 0
Query:    2 SCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSV 198
            SCCQ   C IPC A+  P A     YG   ++A++ +C IG+V  + ++G    +FV GR+L+L V TL LA Q +DSN+ LGNADL+YKY ++DGA L LGLGLSL+LN L +ARH+N+A  LT+PD +AR YGK  EV+   V   SF ALLAGNLVG G IL F F    K G + ++  L   YT+ GG++SV
Sbjct:   47 SCCQFDICGIPCSADDQPVADW---YGVVIIIAVIFFCAIGIVASFGIKGDYTNFFVGGRTLSLPVVTLTLASQCVDSNSVLGNADLSYKYHFWDGACLPLGLGLSLILNGLFLARHMNRAGLLTLPDLWARKYGKAAEVIGGSVCIVSFCALLAGNLVGCGTILAFLFGVSLKEG-ILISGILMFLYTVCGGILSV 239          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: A0A7S3ZPW5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPW5_9STRA)

HSP 1 Score: 177 bits (448), Expect = 6.170e-48
Identity = 98/199 (49.25%), Postives = 129/199 (64.82%), Query Frame = 0
Query:    2 SCCQEQACNIPCPAEWSPAAPLNT--VYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSV 198
            SCCQ   C +PC     P  P N    YG S  +A+  +C IGLV  + V G   K+FVAGR+L L +  + LA Q ID+NA LGNADL+Y Y ++DGAVL +GLGLSL+LN L +A+ +N+   LT+PD YAR YG+L EVL SL+   SFIALLAGNLVG G+IL + + ++    G+  +  +   YT  GGL+SV
Sbjct:  128 SCCQFDVCGLPCA---QPHDPKNAPKFYGRSVAMAVAAFCAIGLVASYYVGGDTAKFFVAGRTLPLPIVVMTLASQCIDANAVLGNADLSYWYHFYDGAVLPIGLGLSLILNGLFLAKPINEMKLLTLPDLYARKYGRLTEVLGSLICTASFIALLAGNLVGCGKILAYLYPTVPLKAGIVTSGLVMLLYTAAGGLVSV 323          
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Match: A0A8J6CCI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI3_DIALT)

HSP 1 Score: 174 bits (440), Expect = 2.980e-47
Identity = 98/197 (49.75%), Postives = 129/197 (65.48%), Query Frame = 0
Query:    2 SCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVRGKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVLVLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTSFIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSV 198
            SCCQ+  C +PC A   P   +  V      VAI I+C+IG    + V GK E +FVAGRSL L V  L LA QSIDSNA LGNADL+YK+ ++DGAVL +GLGLSL++N + +AR +++   LT+P+ YAR YG + EV VS V C SFI+LLAGNLVG   +L +    + +T  VF++  +   YT+ GGL SV
Sbjct:   45 SCCQKDVCGLPCAAP-PPVPKVGFVIAVG--VAIAIFCLIGFASYFFVGGKTENFFVAGRSLPLPVIALTLAAQSIDSNALLGNADLSYKFHFWDGAVLPIGLGLSLIINGVFLARFIHRENVLTLPEIYARYYGPVVEVCVSFVCCASFISLLAGNLVGMAAVLGYL-GGIDQTTAVFVSGTVLFVYTVSGGLFSV 237          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338410 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7Y9_9STRA3.490e-142100.00Solute:Sodium symporter family (Fragment) n=1 Tax=... [more]
A0A835YRZ9_9STRA1.310e-10679.80Solute:Sodium symporter family n=1 Tax=Tribonema m... [more]
A0A835Z2T9_9STRA1.200e-7860.70Solute:Sodium symporter family n=1 Tax=Tribonema m... [more]
D7FZ36_ECTSI1.200e-6656.06Solute:Sodium symporter family n=1 Tax=Ectocarpus ... [more]
A0A6H5KJW0_9PHAE1.670e-6156.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C1E525_MICCC1.170e-5352.02Solute:Sodium symporter family n=2 Tax=Micromonas ... [more]
K8FEG1_9CHLO2.160e-5152.28Solute:Sodium symporter family n=1 Tax=Bathycoccus... [more]
A0A7S3K6Q6_9STRA1.880e-4950.25Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3ZPW5_9STRA6.170e-4849.25Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A8J6CCI3_DIALT2.980e-4749.75Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038377Sodium/glucose symporter superfamilyGENE3D1.20.1730.10Sodium/glucose cotransportercoord: 44..203
e-value: 2.2E-22
score: 81.0
IPR001734Sodium/solute symporterPFAMPF00474SSFcoord: 56..199
e-value: 1.7E-11
score: 43.6
IPR001734Sodium/solute symporterPROSITEPS50283NA_SOLUT_SYMP_3coord: 24..204
score: 16.809191
NoneNo IPR availablePANTHERPTHR48086:SF3SODIUM/PROLINE SYMPORTERcoord: 32..198
NoneNo IPR availablePANTHERPTHR48086SODIUM/PROLINE SYMPORTER-RELATEDcoord: 32..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:220957..224241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338410mRNA_13495Tribonema minus UTEX_B_3156 mRNAContig_91 220957..224241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338410|MIX47173_4_53 ID=Trimin1|338410|MIX47173_4_53|Name=jgi.p|Trimin1|338410|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=204bp
DSCCQEQACNIPCPAEWSPAAPLNTVYGTSNVVAIVIYCIIGLVFLWRVR
GKVEKYFVAGRSLNLFVATLALAGQSIDSNATLGNADLAYKYAWFDGAVL
VLGLGLSLLLNALLVARHVNKACCLTMPDFYARSYGKLFEVLVSLVLCTS
FIALLAGNLVGFGRILTFCFESLGKTGGVFLAAALCASYTIGGGLMSVIG
AGVW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038377Na/Glc_symporter_sf
IPR001734Na/solute_symporter