Trimin1|172323|e_gw1.91.8.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|172323
Unique NameTrimin1|172323|e_gw1.91.8.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length200
Homology
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: A0A835YHD6_9STRA (RmlD_sub_bind domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD6_9STRA)

HSP 1 Score: 389 bits (998), Expect = 1.600e-136
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MDAEGARVSVLVTGGSGYLGQHTLRHFGSLPWVASLSYTYRTAPLAANAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL 200
            MDAEGARVSVLVTGGSGYLGQHTLRHFGSLPWVASLSYTYRTAPLAANAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL
Sbjct:    1 MDAEGARVSVLVTGGSGYLGQHTLRHFGSLPWVASLSYTYRTAPLAANAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL 200          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: A0A7S1U0Z1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0Z1_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.540e-27
Identity = 83/198 (41.92%), Postives = 104/198 (52.53%), Query Frame = 0
Query:   10 VLVTGGSGYLGQHTLRHFGSLP------WVASLSYTYRTAPLAANAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAP-DALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL 200
            +LV GG GYLGQ  L     LP      W   L +T R + LA       H ++        I  +L A RP V+I+TAA++ L  CEK+P+ A  VN+P  L  A A  AP   L+V +STDQ       P+ E    AP+N YGATKL  E  +       A     V LRSSNI+G  AP++ AGKFLQWL GAL
Sbjct:    9 ILVIGGGGYLGQFLLEAL--LPDARDGQW--QLHFTQRNSELAVPG-ATAHAMNLCDE--GQIAALLEALRPAVIINTAAMTSLADCEKNPDEASAVNAPEHLFAAAAAAAPAPPLLVQLSTDQVYDGAHAPYAEGDTAAPVNHYGATKLHCEQRM------AAAGVNGVVLRSSNILGPPAPFSGAGKFLQWLDGAL 193          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: A0A7S1U2N4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2N4_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.470e-26
Identity = 83/198 (41.92%), Postives = 104/198 (52.53%), Query Frame = 0
Query:   10 VLVTGGSGYLGQHTLRHFGSLP------WVASLSYTYRTAPLAANAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAP-DALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL 200
            +LV GG GYLGQ  L     LP      W   L +T R + LA       H ++        I  +L A RP V+I+TAA++ L  CEK+P+ A  VN+P  L  A A  AP   L+V +STDQ       P+ E    AP+N YGATKL  E  +       A     V LRSSNI+G  AP++ AGKFLQWL GAL
Sbjct:    9 ILVIGGGGYLGQFLLEAL--LPDARDGQW--QLHFTQRNSELAVPG-ATAHAMNLCDE--GQIAALLEALRPAVIINTAAMTSLADCEKNPDEASAVNAPEHLFAAAAAAAPAPPLLVQLSTDQVYDGAHAPYAEGDTAAPVNHYGATKLHCEQRM------AAAGVNGVVLRSSNILGPPAPFSGAGKFLQWLDGAL 193          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: I2CPM1_NANGC (Rossmann-fold nad-binding domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPM1_NANGC)

HSP 1 Score: 95.9 bits (237), Expect = 1.700e-20
Identity = 60/131 (45.80%), Postives = 82/131 (62.60%), Query Frame = 0
Query:   79 IHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQ-HARANSPP--FTEA------HARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL 200
            +H AA+S    C ++PE A+RVN P ALL+ALAL +P+AL+V+ STDQ  +   SPP  ++EA          P+N YG +K AFE A+++         R++ LRSSNIIG  +P+ R GKFLQWL   L
Sbjct:    1 MHLAAMSSPAACARNPEKAMRVNCPLALLDALALHSPEALLVFFSTDQVFSGTVSPPALYSEAGESGRREEEEPVNVYGRSKRAFERAIQDRWP------RHLILRSSNIIGPPSPFLRQGKFLQWLDELL 125          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: W7T4Z7_9STRA (Methionine adenosyltransferase 2 subunit beta n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4Z7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.790e-20
Identity = 68/173 (39.31%), Postives = 100/173 (57.80%), Query Frame = 0
Query:   10 VLVTGGSGYLGQHTLRHFGSLPWVAS----LSYTYRTA----PLAANA------QVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQ-HARANSPP--FTEA------HARAPLNAYGATKLAFETALE 159
            VL+TGG+GY+ QH ++    LP   +    L+YTY       PLAA+        V+ H+ D   +  D + + + A +PD V+H AA+S    C ++PE A+RVN P ALL+ALAL +P+AL+V+ STDQ  +   SPP  ++EA          P+N YG +K AFE A++
Sbjct:   20 VLITGGNGYVAQHLIKAL--LPRAQANEIRLAYTYNARNGVDPLAASLPGPTKDHVLAHRADLEDS--DSLHMAVAACKPDAVMHLAAMSSPAACARNPEKAMRVNCPLALLDALALHSPEALLVFFSTDQVFSGTVSPPALYSEAGESGRREEEEPVNVYGRSKRAFERAIQ 188          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: R1E237_EMIHU (dTDP-4-dehydrorhamnose reductase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E237_EMIHU)

HSP 1 Score: 89.7 bits (221), Expect = 1.010e-18
Identity = 72/189 (38.10%), Postives = 95/189 (50.26%), Query Frame = 0
Query:    9 SVLVTGGSGYLGQHTLRHFGSLPWVASLSYTYRTAPLAA------------NAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAP 185
            +VL+TG SGYLGQH + H         L+ T+ T  LAA             A     Q+D +      +  ++   +PDVV+H AA+S    CE+DP  A  VN    LL A+   A     V++STDQ     + P+TE  A AP+N YG +KL+FE AL    TA  P  R V LRSS I+G   P
Sbjct:   35 TVLITGASGYLGQHLIAH---------LARTFPTWRLAAAYGGLDTFAEDFGAVCACVQLDLTDGAA--VTALVSEVKPDVVLHLAAISSPAVCERDPARARAVNECPPLLAAVPAHA---CFVFLSTDQVYDGLAAPYTETSAAAPVNVYGQSKLSFERAL----TAALPS-RSVCLRSSLILGPPTP 204          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: A0A7S0Y2I3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y2I3_HEMAN)

HSP 1 Score: 87.4 bits (215), Expect = 4.560e-18
Identity = 65/178 (36.52%), Postives = 93/178 (52.25%), Query Frame = 0
Query:    6 ARVSVLVTGGSGYLGQHTL-RHFGSLPWVASLSYTYRTAPLAANAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRY-VTLRSSNIIG 181
            A   VLVTGGSGYLGQ  + R   +     + +Y  +   +             + A+  DI   L +  PDVV++ AA+S    C KD  A+  +N+P  LL A++  AP AL++ +STDQ     SP +TE     P+NAYG  KLAFE  +++       R+ + + LRSS IIG
Sbjct:    9 APTRVLVTGGSGYLGQFLIDRLLQTGKHTVAATYMNKKEGMCDGVDAFR----MNLASEGDILACLSSFSPDVVVNLAAISSPAACGKDTAASASINTPSPLLSAMSSAAPHALLIQLSTDQVFDGASPVYTETSPTRPVNAYGEQKLAFEREIQQ-------RWPHSLILRSSLIIG 175          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: A0A7J7QFN2_9CHLO (Methionine adenosyltransferase regulatory beta subunit-related n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QFN2_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 4.870e-18
Identity = 70/197 (35.53%), Postives = 109/197 (55.33%), Query Frame = 0
Query:   10 VLVTGGSGYLGQHTLRHFGSLPWVASLSYTYRTAPLAANAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALA-LEAP---DALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGK--FLQWLQGAL 200
            VL+TGGSGYLGQ  +    +L    S++YTY    L A+  V         AT + ++  +   +P VV++ AA++    CE+D EA  ++N P  L++AL  L+     +AL+++ISTDQ    + P + EA A  P+NAYG +KL      E+H +A  P  ++V LR+S I G   P    G+  F+Q+++  L
Sbjct:   12 VLITGGSGYLGQFLIT---ALKQHHSVAYTYHNNALTAHP-VNAEPFKVDLATGEGLQAAVLQFKPQVVVNCAAIAQPAVCERDYEACRKLNVPSKLVDALKQLQQKTEIEALLIHISTDQVYDGSRPWWAEADATQPVNAYGRSKLE----AEQHLSAAYPA-KHVVLRASLIYGPEPPLQAVGRPLFVQFVESQL 199          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: A0A4D9D0L2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0L2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.860e-18
Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   83 ALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQ-HARANSPP--FTEA------HARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL 200
            A+S    C ++PE A+RVN P ALL+ALAL +P+AL+V+ STDQ  +   SPP  ++EA          P+N YG +K AFE A+++         R++ LRSSNIIG  +P+ R GKFLQWL   L
Sbjct:  163 AMSSPAACARNPEKAMRVNCPLALLDALALHSPEALLVFFSTDQVFSGTVSPPALYSEAGESGRREEEEPVNVYGRSKRAFERAIQDRWP------RHLILRSSNIIGPPSPFLRQGKFLQWLDELL 283          
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Match: R1CQR9_EMIHU (RmlD_sub_bind domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CQR9_EMIHU)

HSP 1 Score: 89.7 bits (221), Expect = 8.270e-18
Identity = 72/189 (38.10%), Postives = 95/189 (50.26%), Query Frame = 0
Query:    9 SVLVTGGSGYLGQHTLRHFGSLPWVASLSYTYRTAPLAA------------NAQVVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRVNSPGALLEALALEAPDALVVYISTDQHARANSPPFTEAHARAPLNAYGATKLAFETALEEHATACAPRFRYVTLRSSNIIGARAP 185
            +VL+TG SGYLGQH + H         L+ T+ T  LAA             A     Q+D +      +  ++   +PDVV+H AA+S    CE+DP  A  VN    LL A+   A     V++STDQ     + P+TE  A AP+N YG +KL+FE AL    TA  P  R V LRSS I+G   P
Sbjct:   35 TVLITGASGYLGQHLIAH---------LARTFPTWRLAAAYGGLDTFAEDFGAVCACVQLDLTDGAA--VTALVSEVKPDVVLHLAAISSPAVCERDPARARAVNECPPLLAAVPAHA---CFVFLSTDQVYDGLAAPYTETSAAAPVNVYGQSKLSFERAL----TAALPS-RSVCLRSSLILGPPTP 204          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172323 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YHD6_9STRA1.600e-136100.00RmlD_sub_bind domain-containing protein (Fragment)... [more]
A0A7S1U0Z1_9STRA2.540e-2741.92Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U2N4_9STRA1.470e-2641.92Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
I2CPM1_NANGC1.700e-2045.80Rossmann-fold nad-binding domain-containing protei... [more]
W7T4Z7_9STRA2.790e-2039.31Methionine adenosyltransferase 2 subunit beta n=2 ... [more]
R1E237_EMIHU1.010e-1838.10dTDP-4-dehydrorhamnose reductase n=2 Tax=Emiliania... [more]
A0A7S0Y2I3_HEMAN4.560e-1836.52Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7J7QFN2_9CHLO4.870e-1835.53Methionine adenosyltransferase regulatory beta sub... [more]
A0A4D9D0L2_9STRA6.860e-1845.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
R1CQR9_EMIHU8.270e-1838.10RmlD_sub_bind domain-containing protein n=2 Tax=Em... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029903RmlD-like substrate binding domainPFAMPF04321RmlD_sub_bindcoord: 9..163
e-value: 2.5E-19
score: 69.4
NoneNo IPR availableGENE3D3.40.50.720coord: 8..199
e-value: 2.1E-34
score: 121.4
NoneNo IPR availablePANTHERPTHR43242NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEINcoord: 8..199
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 10..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:52950..54762 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172323mRNA_13482Tribonema minus UTEX_B_3156 mRNAContig_91 52950..54762 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|172323|e_gw1.91.8.1 ID=Trimin1|172323|e_gw1.91.8.1|Name=jgi.p|Trimin1|172323|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MDAEGARVSVLVTGGSGYLGQHTLRHFGSLPWVASLSYTYRTAPLAANAQ
VVGHQVDFSTATVDDIRVVLRAARPDVVIHTAALSGLGQCEKDPEAALRV
NSPGALLEALALEAPDALVVYISTDQHARANSPPFTEAHARAPLNAYGAT
KLAFETALEEHATACAPRFRYVTLRSSNIIGARAPYTRAGKFLQWLQGAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029903RmlD-like-bd
IPR036291NAD(P)-bd_dom_sf