Trimin1|338261|MIX47024_8_38 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338261
Unique NameTrimin1|338261|MIX47024_8_38
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length266
Homology
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A835YS42_9STRA (Signal peptide peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS42_9STRA)

HSP 1 Score: 505 bits (1301), Expect = 1.570e-180
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query:    1 GVGASLLAAALPEALRERRVRVPRWLQDAIADPADQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQESTLPQPVAVRPMATKQKKEQPK 265
            GVGASLLAAALPEALRERRVRVPRWLQDAIADPADQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQESTLPQPVAVRPMATKQKKEQPK
Sbjct:    1 GVGASLLAAALPEALRERRVRVPRWLQDAIADPADQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQESTLPQPVAVRPMATKQKKEQPK 265          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A7S1Z2G9_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2G9_TRICV)

HSP 1 Score: 194 bits (493), Expect = 2.080e-56
Identity = 116/245 (47.35%), Postives = 156/245 (63.67%), Query Frame = 0
Query:    2 VGASLLAAALPEALRERRVRVPRWLQDAI--ADPADQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVE-RAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQE 243
            VG  +L   LPE+  E  V VP  L  AI  A P       + +  +A LA+  A +AAY  P A +   F+VSNA+AW I M ++G I++ SF TA + L GLF YDI+WVFGTDVM+TVAT+ EAPVKF++  P   E + YPF+VLGLGD+VIP + +  +  +D++L  +         SYF A  AAYA+GL ACF  N ++ +GQPALLYL+PA IGSAL V A NG +  E+++F +E
Sbjct:  144 VGVPILRNVLPESFAEAEVEVPEKLAKAIKLAPPT------LPVDGLATLALGAALSAAYWAPVA-MSQKFLVSNAIAWAIAMTSLGAISLGSFQTAAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYASPPSAEPKPYPFSVLGLGDVVIPGLFVRFMARMDEALQPQ-------VFSYFTAATAAYALGLTACFAVNEITHAGQPALLYLDPACIGSALAVGAANG-QLGEVWNFEEE 373          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A6U0R1W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0R1W4_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.650e-55
Identity = 107/242 (44.21%), Postives = 157/242 (64.88%), Query Frame = 0
Query:    2 VGASLLAAALPEALRERRVRVPRWLQDAIADPADQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLP-ADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQ 242
            +G  +L   LP +  E+ V+VP+     IA   + D   + L  +  L +     A Y  P A +   F++SN +AW + M ++G I++ SF TA + L GLF YDI+WVFGT+VM+TVAT+ EAP+KF++P P +++ERAYPF+VLGLGD+VIP + + L+  +D+ L  +         SYF A  AAYA+GL+ACFV N ++++GQPALLYLNPA IGSAL+   +NG +  E+ +F +
Sbjct:  191 IGVPILRNILPPSFSEKEVQVPK----DIAQKLELDPPTLPLDGLVTLGLGLLCTAIYWAPVA-MEQKFILSNIIAWALAMISLGSISLGSFQTAVILLTGLFCYDIFWVFGTEVMMTVATKVEAPIKFLYPAPPSEIERAYPFSVLGLGDVVIPGLFVRLMTKVDQDLKPK-------VFSYFSAATAAYALGLSACFVVNEITQAGQPALLYLNPACIGSALVCGVING-QLDEIINFEE 419          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A7S4IZL8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZL8_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.500e-50
Identity = 106/253 (41.90%), Postives = 156/253 (61.66%), Query Frame = 0
Query:    2 VGASLLAAALPEALRERRVRVPRWLQDAIADPADQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVE--RAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQESTLPQPVAV 252
            VG  LL   +P++  +  V VP    + +A+    +   + +  +  LA+      AY  P A +   FMVSN +AW + M ++G I++ SF T  + L GLF YDI+WVFGTDVM+TVAT+ EAPVKF++  P ++   ++YPF+VLGLGD+VIP + +  +  +D++L            SYF A  AAYA+GLA+CFV N ++ +GQPALLYL+PA +GSAL V A NG +  E+++F +E    +P  V
Sbjct:  270 VGVPLLRNVVPDSFAKGEVEVP----EPLAEKLKLNPPTLPVDGLTTLALGIVCTLAYWSPVA-MTQKFMVSNIIAWSLAMTSLGAISLGSFQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYANPPELAEGKSYPFSVLGLGDVVIPGLFVRFMSKVDEALKPAVG-------SYFTAATAAYAVGLASCFVVNEITHAGQPALLYLDPACVGSALAVGAANG-QLSEVWNFEEERPEAEPEEV 509          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A6H5KXB8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXB8_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 3.310e-49
Identity = 112/257 (43.58%), Postives = 139/257 (54.09%), Query Frame = 0
Query:   46 VAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSL-----AERDAGRA-------------------GTKV-------------------------------------SYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNG-GEFRELFDF 240
            +A L  A + A  Y+ P   L   F++ N  AWCIGMQ+IGLI+I +F  A + L GLF YDI+WVFGT+VM+TVAT+ EAPVKF+FP   D  + YPF+VLGLGDIVIPA   +L+R+ D  L     AE  A RA                   GT V                                     SYF   VAAYA+GL  CF  N +SKSGQPALLYLNPA++ SA++ A +NG GE  +L  F
Sbjct:  248 LAVLVSAISAAFVYINPSVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAARALLTEVGNKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGVAGAVGEAGGGRSYFDNSVAAYAIGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAF 504          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A7S2MA48_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MA48_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.740e-45
Identity = 85/180 (47.22%), Postives = 121/180 (67.22%), Query Frame = 0
Query:   66 LHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLP-ADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQES 244
            L   F++SNA+AW +GM ++G        T  + L GLF YDI+WVFGTDVM+TVAT+ EAPVKF++  P +D  + YPF+VLGLGD+VIP + +  +  +D+ L  ++       +SYF     AY  GLAACF AN + ++GQPALLYL+P+++GSAL  AAVN  +  E+++F + S
Sbjct:  242 LENKFLISNAIAWALGMVSLGXXXXXXXQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYTAPPSDTPKDYPFSVLGLGDVVIPGLFVRFMAKVDEVLQPKN-------LSYFTTATFAYGAGLAACFGANEMFQNGQPALLYLDPSLVGSALACAAVNN-QLSEVWEFEESS 413          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: K0SK77_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SK77_THAOC)

HSP 1 Score: 159 bits (402), Expect = 8.980e-43
Identity = 85/174 (48.85%), Postives = 114/174 (65.52%), Query Frame = 0
Query:   70 FMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQE 243
            F+ SN LAW +GM +               LGGLF YD +WVFG+DVM+TVAT+ EAPVKFIFP  AD  R Y F+VLGLGD+VIP + + L+   D++L   +        SYF+  V AYA GL ACF AN + ++GQPAL+YL+P+++GSAL  A+ NG +  +L+DF +E
Sbjct:  226 FIASNILAWSLGMASXXXXXXXXXXXXXXXLGGLFFYDAFWVFGSDVMMTVATKVEAPVKFIFP--ADTVRDYNFSVLGLGDLVIPGLFVRLMAKADEALNPEN-------FSYFNTAVLAYAFGLGACFTANAIFQNGQPALIYLDPSLVGSALACASANG-QVAQLWDFQEE 389          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A7S1XEF9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEF9_9RHOD)

HSP 1 Score: 149 bits (376), Expect = 3.880e-39
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 0
Query:   70 FMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLP----ADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAGTKVS---YFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQE 243
            F+++N LAW I  + I LI   SFL A   L GLFLYD++WVFGTDVM+TVA   +AP KF+FP      AD    YP+AVLGLGDIV+P++  SL   +DK +  + +  A   V    YF A   AY +GL   FVANTL+   QPAL YL P+++GS+L+ AA+ G E + +  F  +
Sbjct:  176 FLLNNILAWGIAARTISLIQPSSFLVAAGLLTGLFLYDVFWVFGTDVMVTVAMAIDAPAKFLFPRDLSSYADPSSVYPYAVLGLGDIVVPSLFASLALTIDKRIVYQTSPSAIGHVPSGPYFRASFIAYFVGLGLTFVANTLTSHAQPALFYLVPSLLGSSLLTAAMRG-EMKSIVAFQND 355          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A7S3T9S7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T9S7_EMIHU)

HSP 1 Score: 141 bits (356), Expect = 1.790e-37
Identity = 95/224 (42.41%), Postives = 129/224 (57.59%), Query Frame = 0
Query:   33 PADQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMV------SNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLP---ADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSLAERDAGRAG-------TKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDF 240
            PAD         A  A AV+ A  AAYL       G   +      +++L + I M ++G+I ++SF  A   L GLF YD ++VF +DVMLTVAT+ EAP KF++      AD    YPF+VLGLGD+V+P   + LLR LDK     + GRAG        + SYF  G+ AYA GL + F AN L+KSGQPAL+Y+ P+++ SA+  AA + GE   L +F
Sbjct:    3 PADVSRTCPATGAAPAFAVSLAVVAAYLQGPLSTGGPLSLPAFAALNDSLGFGIVMTSLGVIALESFAAAAALLLGLFCYDAFFVFKSDVMLTVATQIEAPAKFLWAAVGAGADAGSRYPFSVLGLGDVVVPGAFVGLLRELDK-----EQGRAGGGSEEEAREASYFQVGLGAYAAGLLSTFAANYLTKSGQPALVYIVPSLLLSAVATAA-SRGELPSLLEF 220          
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Match: A0A7S4NNE3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NNE3_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 2.280e-36
Identity = 82/179 (45.81%), Postives = 112/179 (62.57%), Query Frame = 0
Query:   70 FMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERA-YPFAVLGLGDIVIPAIVISLLRNLDKSLA----ERDAGRAGTKVSYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQE 243
            ++V+N L +   +QAI ++ + S+   C+ LGGLFLYDI+WVFGTDVM+TVA  F+APVK +FP   D+  A Y FA+LGLGDIVIP + ++LL   D  LA     +   +A    ++FH    AY +GLA         ++ QPALLYL P VIG++LI A V G +  EL  F +E
Sbjct:  174 WIVNNILGFAFSLQAISMLNLGSYRIGCILLGGLFLYDIFWVFGTDVMVTVARSFDAPVKLLFP--KDIFAAEYQFAMLGLGDIVIPGVFVALLLRFDAHLAGFKKSQKMEKASFPQTFFHVNCVAYILGLATTIGVMHFFQAAQPALLYLVPYVIGASLITAVVKG-KLGELLMFEEE 349          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338261 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS42_9STRA1.570e-180100.00Signal peptide peptidase-domain-containing protein... [more]
A0A7S1Z2G9_TRICV2.080e-5647.35Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A6U0R1W4_9STRA2.650e-5544.21Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4IZL8_9STRA4.500e-5041.90Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6H5KXB8_9PHAE3.310e-4943.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2MA48_9STRA1.740e-4547.22Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0SK77_THAOC8.980e-4348.85Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1XEF9_9RHOD3.880e-3946.96Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3T9S7_EMIHU1.790e-3742.41Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S4NNE3_9EUKA2.280e-3645.81Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006639Presenilin/signal peptide peptidaseSMARTSM00730psh_8coord: 27..230
e-value: 4.7E-5
score: 32.8
IPR007369Peptidase A22B, signal peptide peptidasePFAMPF04258Peptidase_A22Bcoord: 67..242
e-value: 4.6E-50
score: 170.8
IPR007369Peptidase A22B, signal peptide peptidasePANTHERPTHR12174SIGNAL PEPTIDE PEPTIDASEcoord: 48..244
NoneNo IPR availablePANTHERPTHR12174:SF23MINOR HISTOCOMPATIBILITY ANTIGEN H13coord: 48..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_90contigContig_90:373816..378226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338261mRNA_11444Tribonema minus UTEX_B_3156 mRNAContig_90 373816..378226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338261|MIX47024_8_38 ID=Trimin1|338261|MIX47024_8_38|Name=jgi.p|Trimin1|338261|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=266bp
GVGASLLAAALPEALRERRVRVPRWLQDAIADPADQDERGVRLPAVAALA
VATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFL
GGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLG
DIVIPAIVISLLRNLDKSLAERDAGRAGTKVSYFHAGVAAYAMGLAACFV
ANTLSKSGQPALLYLNPAVIGSALIVAAVNGGEFRELFDFTQESTLPQPV
AVRPMATKQKKEQPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006639Preselin/SPP
IPR007369Peptidase_A22B_SPP