mRNA_11430 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: A0A835YJ49_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ49_9STRA) HSP 1 Score: 1118 bits (2891), Expect = 0.000e+0 Identity = 760/760 (100.00%), Postives = 760/760 (100.00%), Query Frame = 1
Query: 118 MSSSLTILWSGRRKAVKVGANSPMSAVLADACAAHGLTNTAKYTLFHKKAVVDLTQPFRLSSIPQNTTLELREVAAPSASATVRIGVRLSTGQRLQGSYPVASTLQQVLVDLLTQNGLGADGVDSAVLQFMRTTYAGPELAATTLAAMGLHGGSAMFTVSVGANGSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPTKRHMQDSPSGSAGYAPVQQXXXXXXXXXXXXXXXXXXXDEGFEESKASEPPSLSAATLAAATDTVAPMDVAADAPPLLPAVNAATXXXXXXAAAPDVGLEACERALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQGPAAALIAERGLGVSAGDCLREDLVAXXXXXXXXXXXXXXXXSGLALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGKKPSWLKLR 2397
MSSSLTILWSGRRKAVKVGANSPMSAVLADACAAHGLTNTAKYTLFHKKAVVDLTQPFRLSSIPQNTTLELREVAAPSASATVRIGVRLSTGQRLQGSYPVASTLQQVLVDLLTQNGLGADGVDSAVLQFMRTTYAGPELAATTLAAMGLHGGSAMFTVSVGANGSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPTKRHMQDSPSGSAGYAPVQQXXXXXXXXXXXXXXXXXXXDEGFEESKASEPPSLSAATLAAATDTVAPMDVAADAPPLLPAVNAATXXXXXXAAAPDVGLEACERALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQGPAAALIAERGLGVSAGDCLREDLVAXXXXXXXXXXXXXXXXSGLALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGKKPSWLKLR
Sbjct: 1 MSSSLTILWSGRRKAVKVGANSPMSAVLADACAAHGLTNTAKYTLFHKKAVVDLTQPFRLSSIPQNTTLELREVAAPSASATVRIGVRLSTGQRLQGSYPVASTLQQVLVDLLTQNGLGADGVDSAVLQFMRTTYAGPELAATTLAAMGLHGGSAMFTVSVGANGSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPTKRHMQDSPSGSAGYAPVQQXXXXXXXXXXXXXXXXXXXDEGFEESKASEPPSLSAATLAAATDTVAPMDVAADAPPLLPAVNAATXXXXXXAAAPDVGLEACERALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQGPAAALIAERGLGVSAGDCLREDLVAXXXXXXXXXXXXXXXXSGLALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGKKPSWLKLR 760
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: A0A6H5LNR6_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNR6_9PHAE) HSP 1 Score: 242 bits (617), Expect = 7.330e-68 Identity = 175/378 (46.30%), Postives = 224/378 (59.26%), Query Frame = 1
Query: 1054 PDVGLEACERALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPH---------AHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARR----PSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVA---------MDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQ 2121
P +G+E C ALE + + HFDAD CV TL K +D V+ RPG++RTR I+ +NAAF +KVGR++GG FL G GFV + +G LVL PEREDA LL AR+LL +A LG+P +P R P PSA APA FDP+KP ++S AP PK E S+TE+R+ ELLAK R VTLP XXXXXXXXXXXX A M DG D LLA++VARQ+AERK+++ PFQT+AMR++ERLQK+ Y +I+VQ PDR V+Q+ F E V D+ V ++L V+ A PF LYV+PPR L A + L+D GLVPAAL+Y+SW+
Sbjct: 9 PAMGIEVCRAALEAMAAGHFDADSQACVTTLAKVIDNVVHRPGDSRTRQIRCANAAFQHKVGRITGGISFLEGVGFV-SREEGPQXXXXXXXXXXXXXXXXSAGDRFLVLAPEREDAGLLKAARDLLSKQAEALGVPRERMPQPPRARPSPPPPSAGQAAPAAFDPYKPFMTSTAPTPKDPQ-ESSLTEKRLEELLAK-------------RAAVVTLPSQXXXXXXXXXXXXFSVGAAGRERDGSSGMGXXXDGERGDGGLLAKKVARQIAERKKQDEVPFQTKAMRDIERLQKSTVYRTTVIKVQFPDRVVLQSTFASTEGVKDLLDVVKSSLEDDVA-ARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWR 370
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: A0A7S2V2I9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2I9_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.070e-59 Identity = 144/360 (40.00%), Postives = 208/360 (57.78%), Query Frame = 1
Query: 1045 AAAPDVGLEACERALEQLRSSHFDADVGECVVTLIKYVDGVL-TRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQ 2121
A AP G+E C +A+E +RSS FDA ++TL+KY +L + PG+ R R I++SNA F KV + GG F GFV+ + MS+ +A+DP + LVL PE ED +++ +A LL EA LG+ + P ++ +AP AP P FDP+K V+S+AP EPSITE+++ +L +Q +E DR++ + + G SD L+A+ + +++ E+K+ EA PF+TRAMRELE L+KAK ++ +IRVQ PDR V+QA F PRE+VG V V L + PF LYV+PP+ LAA+ +L +GLVPAAL+YLSW+
Sbjct: 14 AGAPLGGIEGCRQAIETIRSSCFDAAASPVILTLMKYTHNLLHSPPGDDRPRNIRISNATFQAKVAAVEGGQAFFHALGFVQESR--GMSYDVARDPLGTSFLVLKPEAEDRAIVEQALALLHIEADILGIGQDQRPKQKKAAAP---APPPVAFDPYKSNVTSMAPTITSEYREPSITEKKLKQLKDRQGLLEGGIP---DRQVQIFNSANPPPAATPGP--------VLGDARSAGASDSTLIARSMHKKMEEQKKREAAPFRTRAMRELEALEKAKVFAFTVIRVQFPDRVVIQAHFHPRESVGTVIDLVRQNLSPDHANR-PFHLYVSPPKTKLAAEDLLTAQGLVPAALVYLSWE 356
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: A0A4D9D7M0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7M0_9STRA) HSP 1 Score: 219 bits (558), Expect = 4.440e-57 Identity = 259/738 (35.09%), Postives = 343/738 (46.48%), Query Frame = 1
Query: 85 RKSQERSP-SGGMSSSLTILWSGRRKAVKVGANSPMSAVLADACAAHGLTNTA--KYTLFHKKAVVDLTQPFRLSSIPQNTTLELREVAAPS---------ASATVRIGVRLSTGQRLQGSYPVASTLQQVLVDLLTQNGLG----ADGVDSAVLQ--------FMRTTYAGPE-LAATTLAAMGLHGG-SAMFTVSVGANGSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPTKRHMQDSPS-GSAGYAPVQQXXXXXXXXXXXXXXXXXXXDEGFEESKASEPPSLSAATLAAATDTVAPMDVAADAPPLLPAVNAATXXXXXXAAAPDVGLEACERALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLC--AEARQLGL-PPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAA-----AVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQGPAAALIAERGLGVSAGDCLREDL 2193
RK RS S GM+ L +L++GR+K +K NS M L AC HG+ A Y L +KK +DL+QPFR + IP N LEL E + S A VR+G++L G+RL GS+ ++L +LV + L + +D A+ Q ++R ++ G E L TTLA+MGL GG SA+ V + XXXXXXXXXXXXX P + D+ G G XXXXXXXXXXXXXXX ++ + +S P S T PP P+ LE E AL L SHFD DV E ++ L +Y+D +L RP + + R IK SN F K+ G FLL GFV L D + LVLP +AS L RAR LL AE +L L PP + P A R A FDP++P +SLAPQP + S+T+R++AEL KQ ++ A A R+L V P A +D LAQ +ARQ A +KR E PF+TRA RE+E L+ AK Y H L+R PDR V+Q + PRETVG+V A++ RA V L+ TPPRR L VL + G+VPAA+++++W+G A+ GV+ G LR L
Sbjct: 23 RKRASRSTESSGMA--LNVLFNGRKKQIKCSPNSTMQTALEHACREHGIGEAAWPGYVLLYKKGPIDLSQPFRFTGIPNNAALELSETPSSSLPGPGGSRGAGHKVRVGLQLEGGRRLTGSFDPETSLADILVQCSSPPSLPPSPLSPPLDPALFQEGSAIGIVYLRQSFQGWETLKRTTLASMGLRGGGSALLHCRVAVLPAKISPYALGRGEEGGRXXXXXXXXXXXXXKTWEQYAVRPP-----------PLPSRVDDAMGPGRKGGGXXXXXXXXXXXXXXXXXXXRDTNEDLALSTASSHPREASEMTT----------------PPSPPS------------------LEDAEAALAALGGSHFDCDVRESLLLLSRYLDNLLARPTDPQPRRIKCSNPHFRAKILPRRGALDFLLAIGFVPDPPG-----PLCPDAASPTSLVLPCSPHEASHLRRARRLLLPLAETLELSLGPPPAPPTAPRXXXXXXXXXA---FDPYRPAFTSLAPQPPRNTGGCSLTDRKLAELKQKQAALQHALPA---RDLQVFAPASLPPFLPP----------ASSWTPASSSTDMRTLAQSLARQQAVKKRNEEAPFRTRAQREIEALEGAKVYPHTLLRFHFPDRYVLQLQAHPRETVGNVRRVLWDEALNEEGRAAVGEEGRLVLHTTPPRRVLETSMVLEEGGMVPAAVIHVTWEGAAS--------GVAGGRYLRAGL 684
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: A0A7S2RKB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKB7_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.520e-51 Identity = 212/687 (30.86%), Postives = 308/687 (44.83%), Query Frame = 1
Query: 133 TILWSGRRKAVKVGANSPMSAVLADACAAHGLTNTAK---YTLFHKKAVVDLTQPFRLSSIPQNTTLELREVAAPS-ASATVRIGVRLSTGQRLQGSYPVASTLQQVLVDLLTQNGL----GADGVDSAVLQFMRTTYAGPELAATTLAAMGLHGGSAMFTVSVGANGSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPTKRHMQDSPSGSAGYAPVQQXXXXXXXXXXXXXXXXXXXDEGFEESKASEPPSLSAATLAAATDTVAP-MDVAADAPPLLPAVNAATXXXXXXAAAPDVGLEACERALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQL--GLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGP--SDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAAL----RAGVSGACP-FALYVTPPRRTLAADA----VLADEGLVPAALLYLSWQGP 2127
T+ G+R+ +G + P+ +L A L Y L H++ +DL++ R S + N +E+ VA+ S A+ +V++ + L G+RL + STL+ +L Q+ + G+ +A L + R T+AGP L AT L+A+G+ GGSA F + +GA P XXXXXXXXXX P + ++ A E+ KA + A +A M+ A P P+ +AA A+ GL +C ALE++ ++ + C+VT+ KY+ +L P + R R I+ SN AF+ +V + GG FL GAGFV Q+A DP P E ED LL RA LL A LPP + FDPFK ++S+ QP+ +PS+TE ++A L KQ+ A AA DR++ V P GD GP D L+A+ +A ++A+ KR E PFQT+AMREL +L+KA+ Y ++RVQ PDR+VV A F P ET+ VAA VS L A P F L++TPPR+ L + L + GLVPA ++YLSW+ P
Sbjct: 4 TLRHEGQRRQASLGMDDPLHELLGQAVEVFALGQRPPQDFYQLQHQRRALDLSKTPRQSGLASNAVVEV--VASRSRAAGSVKVALSLPGGRRLVSAVAPGSTLRGMLQHFEEQDPVLLPPGSASAGAATLVYFRQTFAGPGLDAT-LSAIGIRGGSARFNLELGA-----PVAGGASSSFPPAAAAAPAPTQPIRPPVSXXXXXXXXXXATPGRSLAAPAASPSNQVTASASNVAAEDARARIA----------------SLEQEKAEAVAAEDYERAAKLKREIAQLMEQLAGEQPARPS-SAAVQSSLPSPASTGRGLGSCRLALERICAAPA-SQAETCMVTMSKYLKNILRSPLDDRPRRIRCSNEAFSKRVASVPGGEDFLRGAGFVLQEEPCENPFQMAADPRRFTFFAFPREEEDLDLLRRAFSLLQEAAGPAVGALPPTAATTVA--------------FDPFKARITSMTGQPRAPTGQPSVTETKLAHL--KQQMASLATAAVPDRDVRVMPPS--------EFQAFRRGPAPAQGGDSDGPLPGDAGLVAKAMAAKMAQAKRAEDVPFQTKAMRELAQLEKARVYERTIVRVQFPDRTVVTANFHPHETIQAVAAVVSDLLIRPQGTDPGPAAPDFDLFITPPRQVLTQSSHSSKSLTELGLVPACVIYLSWKSP 640
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: K3WKD5_GLOUD (UBX domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKD5_GLOUD) HSP 1 Score: 159 bits (401), Expect = 2.520e-37 Identity = 133/345 (38.55%), Postives = 172/345 (49.86%), Query Frame = 1
Query: 1084 ALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSW 2118
AL+ LR + FDA + TL+K V +L+ P + R+I+VSNAAF VG L GG +FL GF L Q+ LVL + S L LL EA L + + IPV P A A FD +KP ++ + QP+G PS+TE V L +KQ Q+ R +VTLPG V MD G+ PSD +L + + AE E+A F+T+AMREL+ L+K K + LIRVQ PDR V+QA F P ETV DV V +L+ SG F LY+TPP + L LA+ LVPAAL YLSW
Sbjct: 231 ALQLLRDNCFDATARGAIPTLMKIVTNILSYPDNEKMRSIRVSNAAFQRSVGSLKGGIEFLESVGFT-----------LDQETQC---LVLKSAADTKSQLEEGLRLLNNEADDLNIEESKIPVVVVPRA------ADPDFDVYKPQITRMQAQPRG----PSVTEVLVDNLKSKQDQLVGHEKPP--RNTSVTLPG-RQSAASFIPSAASTMDVDMDEGEH--PSDSRILISTLKAKRAEM--EKAKNFRTQAMRELDELKKKKVFQTTLIRVQFPDRVVLQAAFHPNETVQDVVDHVRESLQQAFSGN-QFYLYITPPTQKLDPRKTLAELNLVPAALTYLSW 543
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: W2RFA9_PHYPN (UBX domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2RFA9_PHYPN) HSP 1 Score: 152 bits (384), Expect = 6.620e-35 Identity = 129/345 (37.39%), Postives = 170/345 (49.28%), Query Frame = 1
Query: 1084 ALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSW 2118
AL+ LR S+FDA V TL+K V +L+ P + R+I++SNAAF VG++ GG +FL GF P VLVL P D S+LA LL EA L + P++ PV R P FD FK ++ + QP+G PS TE V L +KQ Q+ R TV L G A G+ G +D LL + + E E+ F+T+AMREL+ L++ K + ALIRVQ PDR+V+QA F P ET+ DV V+ L A F LYV+PP + LA+ LA+ LVPAAL YLSW
Sbjct: 240 ALQLLRDSNFDAVSRAAVTTLMKIVTNILSNPENEKVRSIRLSNAAFYRNVGQVKGGLEFLKSVGFAVV-------------PETQ-VLVLSPGPSDKSVLAEGLRLLSIEADDLNISPDARPVVRE----KREDPN---FDVFKTQITRVQMQPRG----PSTTEVLVDALKSKQDQLVGHEKPP--RSTTVVLEGRRANSPINLVE-------ASTDGEPGERNDAQLLISSLKARREEM--EKTKNFRTQAMRELDDLKRKKVFQTALIRVQFPDRAVMQATFHPNETIRDVMDHVTECL-ADQYKPSRFYLYVSPPTQKLASTKTLAELNLVPAALTYLSW 547
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: A0A329RPT8_9STRA (UBX domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RPT8_9STRA) HSP 1 Score: 152 bits (383), Expect = 8.780e-35 Identity = 132/360 (36.67%), Postives = 175/360 (48.61%), Query Frame = 1
Query: 1084 ALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDT---GDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQGPAAALIAERG 2154
AL+ LR ++FDA V TL+K V +L+ + R+I++SNAAF VG++ GG +FL GF P +LVL P D S+L LL EA L +PP+S P R +A FD FK ++ + QP+G PS TE V L +KQ Q+ R TV L G + +T G+ G +D LL + + E E+ F+T+AMREL+ L++ K + ALIRVQ PDR+VVQA F P ET+ DV V+ L A + F LYVTPP + LA LA+ LVPAAL YLSW A IA G
Sbjct: 240 ALQLLRDNNFDAVSRTAVTTLMKVVTNILSDLENDKVRSIRLSNAAFYRTVGQVKGGMEFLTSVGFAVV-------------PETQ-MLVLSPSPSDKSVLEEGLRLLSIEADDLNIPPDSRPAVREKNADPN-------FDVFKTQITRVQMQPRG----PSTTEVLVDALKSKQDQLIGHEKPP--RNTTVALEG-----------RRARGRITSETSTEGELGERNDAQLLISSLKTRREEM--EKTKNFRTQAMRELDELKRRKVFQTALIRVQFPDRAVVQASFHPNETIQDVIDHVTECLAAQFKTS-RFYLYVTPPTQKLATTKTLAELNLVPAALTYLSWLEVPQAEIASTG 558
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: B8C616_THAPS (UBX domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C616_THAPS) HSP 1 Score: 150 bits (380), Expect = 2.770e-34 Identity = 126/373 (33.78%), Postives = 185/373 (49.60%), Query Frame = 1
Query: 1078 ERALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETA-ADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEA-RQLGLPPNSIP-------------VARRPSAPSAHAPAPAPFDPFKPL---VSSLA---PQPKGSDAEPSI--TERRVAELLAKQRQIEAANAAA--FDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQ 2121
E A ++ S+FDA +C+ TL+K +D +L+RP E + R+I+ +NAAF KVGR GG +FL GFV A G Q P L +P + E LL + R++L A R LG+ + +P ++ PSA F+ +K V S A P P SDA ++ TER++ +L +K+ ++E AA DR L LPG + + G G D L+A R+ R ERK+ E F T+AMR+LE+L+K K YSH IR+ D + + AKFLP E V + + + ++ + ++ F LYV PPRR L L E L PAA +++SW+
Sbjct: 192 EEAWSKILQSNFDAATKDCLNTLLKIIDNLLSRPNEPKVRSIRCANAAFEKKVGRCVGGYEFLYSLGFVPVIPAIGG------QQPE---TLEMPSQNESRELLLQGRKVLVQSASRDLGINEDDLPPVPKALAEVPASALSAPPSAARTQQGTTVDFNVYKGHSFNVQSAAVGVPNPY-SDASSTLSTTERQLQQLQSKKSKLEREMQAAVEMDRGLIAYLPGTGPSGMVPSAS-------SANAGPVEGKGDSSLVAARMKRMEEERKKREDGGFTTKAMRDLEKLKKTKVYSHVQIRINFSDGTHLHAKFLPSEKVASIRSIIQSSFQTHLAETLHFDLYVAPPRRLLIDTNSLEAEELAPAAKIHVSWK 547
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Match: A0A1V9Z967_9STRA (UBX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z967_9STRA) HSP 1 Score: 143 bits (361), Expect = 3.870e-32 Identity = 119/350 (34.00%), Postives = 177/350 (50.57%), Query Frame = 1
Query: 1084 ALEQLRSSHFDADVGECVVTLIKYVDGVLTRPGEARTRTIKVSNAAFANKVGRLSGGPQFLLGAGFVETAADGAMSHQLAQDPHAHAVLVLPPEREDASLLARARELLCAEARQLGLPPNSIPVARRPSAPSAHAPAPAPFDPFKPLVSSLAPQPKGSDAEPSITERRVAELLAKQRQIEAANAAAFDRELTVTLPGGXXXXXXXXXXXXXXXXVAMDTGDDGGPSDKVLLAQRVARQLAERKREEATPFQTRAMRELERLQKAKAYSHALIRVQLPDRSVVQAKFLPRETVGDVAAAVSAALRAGVSGACPFALYVTPPRRTLAADAVLADEGLVPAALLYLSWQGPAA 2133
AL+++R+S+FDA + V+TL+K + +L++PG+ + R+I+++N F VGR +GG FLL GF DG M + P L +A +L EA L + N P PSA P+P FD ++PL++ + QP+G+ SITE R+ +L K++Q +A R+ V P V D GG SD LLAQ + E ++ ++ F+T AMRELE +++ Y A+IRV+ PD+ V+QA F P+E + VA+ V++ L A S F LY TPP L L D LVPA+ ++L W P A
Sbjct: 217 ALQRVRNSNFDAVSADVVLTLMKILCNILSKPGDPKVRSIRMTNPKFTASVGRHTGGIDFLLAVGFA-LDDDGEMLRLATESPEE---------------LQQALRVLQDEADDLRIEHNRRPQVVVPSA----FPSPE-FDAYQPLITRMQAQPRGA----SITEMRLDDL--KKKQEALLGSAVPPRQTRVLFP------------HELHNAVMPAAPDTGGKSDAQLLAQAAKARQVEAEKNQS--FRTLAMRELEEMERKSVYQSAVIRVRFPDKVVLQATFHPQEPLSAVASHVASCLAAPAS----FYLYTTPPMHKLDVAKSLLDLHLVPASNIFLGWDVPLA 521 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|98163 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11430 ID=mRNA_11430|Name=jgi.p|Trimin1|98163|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2531bp|location=Sequence derived from alignment at Contig_90:257601..265010+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGGGAAGGCTGTTTGCGCCCAGTTTGCTTACAGTTTGAATTTTGAACAGCback to top protein sequence of jgi.p|Trimin1|98163 >Trimin1|98163|CE98162_658 ID=Trimin1|98163|CE98162_658|Name=jgi.p|Trimin1|98163|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=761bp MSSSLTILWSGRRKAVKVGANSPMSAVLADACAAHGLTNTAKYTLFHKKAback to top mRNA from alignment at Contig_90:257601..265010+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11430 ID=mRNA_11430|Name=jgi.p|Trimin1|98163|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7410bp|location=Sequence derived from alignment at Contig_90:257601..265010+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_90:257601..265010+ >mRNA_11430 ID=mRNA_11430|Name=jgi.p|Trimin1|98163|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2283bp|location=Sequence derived from alignment at Contig_90:257601..265010+ (Tribonema minus UTEX_B_3156 )back to top |