Trimin1|347245|estExt_Genemark1.C_Ctg_90142 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347245
Unique NameTrimin1|347245|estExt_Genemark1.C_Ctg_90142
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length238
Homology
BLAST of jgi.p|Trimin1|347245 vs. uniprot
Match: A0A835YHZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHZ6_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.210e-101
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query:    1 MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM 237
            MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM
Sbjct:    1 MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM 237          
BLAST of jgi.p|Trimin1|347245 vs. uniprot
Match: A0A835YHM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM5_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.630e-54
Identity = 151/214 (70.56%), Postives = 158/214 (73.83%), Query Frame = 0
Query:   24 MQEAGGEERVFKYSLPKDPPSPPDDITRSRAAAAAPRSRGLLRGVLAVMRAARVVAGXXXXXXXXAVHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIARLTAALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAXXXXGGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM 237
            MQEAGGEERVFKYSLPK+PP  PDDITR+R      RSRGLLRGVLA+ RAARV+AG        AVHA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                ARL AALSTGG+DGGRASLTAMIAQG GGMRAAG+ LGRARILL RRGAA    G EG AGDEFA EL DED E ESPG+LEERRG NGVM
Sbjct:    1 MQEAGGEERVFKYSLPKEPP--PDDITRARXXXXXARSRGLLRGVLAITRAARVLAGGTAAAAVDAVHAGRQQARDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------ARLAAALSTGGVDGGRASLTAMIAQGRGGMRAAGRTLGRARILLRRRGAAAAAAG-EGVAGDEFALELEDEDGEFESPGRLEERRGLNGVM 195          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347245 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YHZ6_9STRA1.210e-101100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YHM5_9STRA2.630e-5470.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:1378989..1380713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347245mRNA_3632Tribonema minus UTEX_B_3156 mRNAContig_9 1378989..1380894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347245|estExt_Genemark1.C_Ctg_90142 ID=Trimin1|347245|estExt_Genemark1.C_Ctg_90142|Name=jgi.p|Trimin1|347245|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=238bp
MTAGFRRPKRIPFLPPACGAAQVMQEAGGEERVFKYSLPKDPPSPPDDIT
RSRAAAAAPRSRGLLRGVLAVMRAARVVAGGTAAAAVNAVHAGRQQACDG
AAAAAAAPAPRARDSAAAAAAPLKKQRRSVVALLLLLPALLAAAIIARLT
AALSTGGIDGGRASLTAMIAQGCGGMRAAGKMLGRARILLSRRGAAAAAA
GGEGAAGDEFAPELGDEDDELESPGQLEERRGPNGVM*
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