Trimin1|347184|estExt_Genemark1.C_Ctg_90027 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347184
Unique NameTrimin1|347184|estExt_Genemark1.C_Ctg_90027
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length135
Homology
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: A0A835YHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHG1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 8.010e-87
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query:    1 MTHNRRPSLLRAESGDEDAAAASQPVSVAEEKKEETKQEVVPMDMSLPTINLDAKDQDKSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDFY 134
            MTHNRRPSLLRAESGDEDAAAASQPVSVAEEKKEETKQEVVPMDMSLPTINLDAKDQDKSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDFY
Sbjct:    1 MTHNRRPSLLRAESGDEDAAAASQPVSVAEEKKEETKQEVVPMDMSLPTINLDAKDQDKSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDFY 134          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: D8LJZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ9_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.680e-25
Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 0
Query:   61 YPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDF 133
            YPI  P+Y LL L+TVV+IAF GSIFEV G  P LGY  TYIIG LSLP FIFLFYAAIKKG+AE EEDD  F
Sbjct:  117 YPIPLPSYLLLVLATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPTFIFLFYAAIKKGKAEVEEDDAKF 189          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: A0A7S2P364_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P364_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.420e-15
Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 0
Query:   55 KDQDKSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDF 133
            +++ ++YPID P+  LL+ S V+AI+ +GS+FE+AG +P LG+  T  I AL LP  +FL YAAI KG AE EE D +F
Sbjct:   35 EEELQAYPIDLPSPILLATSMVLAISSIGSLFELAGGTPKLGFAVTAAITALGLPISVFLIYAAILKGSAETEEADREF 113          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: A0A7S2XVJ4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ4_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 8.390e-15
Identity = 37/69 (53.62%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   63 IDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDD 131
            +  PAY  L +S VVAIAF+G+IFEV+G  PLLG+  T+ I   S PGF++LFY ++K+GQ E +ED+D
Sbjct:  125 LPLPAYLYLVVSCVVAIAFIGTIFEVSGGKPLLGFPLTWAIMVASGPGFLYLFYCSLKRGQIEEKEDND 193          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: A0A7S4JDB9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JDB9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.240e-14
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   60 SYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDF 133
            +YP++ P+  LL  S ++AIA +GSIFE++G +P  G  PT  I A+ LP  +FLFYAAI KG AE EEDD  F
Sbjct:   89 NYPLNVPSPLLLGSSMILAIASIGSIFELSGGNPSNGVGPTAAIAAIGLPTCLFLFYAAIMKGIAETEEDDKAF 162          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: A0A2V3IZS2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS2_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 4.560e-12
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   62 PIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEED 129
            PI+ P+  LL  S+V+AIA +G +FE+ G  P  G+  T  I  +SLP F+FLFYAAIKKGQ EA ED
Sbjct:   58 PINAPSGVLLLSSSVLAIAAIGCVFELTGGHPTYGFNVTAGILTVSLPSFLFLFYAAIKKGQIEALED 125          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: A0A7S2C8R0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C8R0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.740e-11
Identity = 38/69 (55.07%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   66 PAYGLLSLSTVVAIAFVGSIFEV---AGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDDD 131
            P+YG L  S ++AIAFVG IF++     P+P  G   T II   S P +IFLF AAIKKGQ EAEEDD+
Sbjct:  108 PSYGFLGSSVLLAIAFVGCIFQLFYDKPPAPYFGVPITSIIFVFSGPTWIFLFIAAIKKGQKEAEEDDE 176          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: A0A7S0BKC5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BKC5_9RHOD)

HSP 1 Score: 64.3 bits (155), Expect = 1.350e-10
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   62 PIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEE 128
            P++ P+  LL L++++AI+ +G IFE++   P  G   T  I A S PGF+F +YAAIKKGQ EA++
Sbjct:   58 PVNLPSSALLGLASILAISTIGCIFEISSGQPQYGTPITVGILAFSAPGFLFSYYAAIKKGQYEADQ 124          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: M1VLL8_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VLL8_CYAM1)

HSP 1 Score: 63.9 bits (154), Expect = 2.580e-10
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   53 DAKDQDKSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEE 128
            D K     +PI  PAYG L +S+V+AIA +GS+FE++   P  G V T  + ALSLPGF+  F+ A++KG+ E+++
Sbjct:   65 DEKPAYLRFPI--PAYGYLGISSVLAIAAIGSVFELSSGKPQYGVVFTASVLALSLPGFLATFWLALEKGRDESDQ 138          
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Match: M2XU10_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XU10_GALSU)

HSP 1 Score: 63.9 bits (154), Expect = 3.380e-10
Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   62 PIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEA 126
            P++ P+  LL +S V+AIAFVGSIFE++   P  G   T +I   SLP F+FLFYAAI+KG+ E+
Sbjct:   81 PLNVPSGILLGVSCVLAIAFVGSIFELSSGHPQYGRELTSVILVSSLPSFLFLFYAAIQKGKDES 145          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347184 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A835YHG1_9STRA8.010e-87100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LJZ9_ECTSI5.680e-2572.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2P364_9STRA1.420e-1550.63Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2XVJ4_9STRA8.390e-1553.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4JDB9_9STRA3.240e-1452.70Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2V3IZS2_9FLOR4.560e-1254.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2C8R0_9STRA2.740e-1155.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0BKC5_9RHOD1.350e-1046.27Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M1VLL8_CYAM12.580e-1044.74Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
M2XU10_GALSU3.380e-1052.31Uncharacterized protein n=2 Tax=Galdieria sulphura... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:182352..184413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347184mRNA_3521Tribonema minus UTEX_B_3156 mRNAContig_9 182233..184501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347184|estExt_Genemark1.C_Ctg_90027 ID=Trimin1|347184|estExt_Genemark1.C_Ctg_90027|Name=jgi.p|Trimin1|347184|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=135bp
MTHNRRPSLLRAESGDEDAAAASQPVSVAEEKKEETKQEVVPMDMSLPTI
NLDAKDQDKSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPT
YIIGALSLPGFIFLFYAAIKKGQAEAEEDDDDFY*
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