Trimin1|338012|MIX46775_1_22 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|338012
Unique Name	Trimin1\|338012\|MIX46775_1_22
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	225

Homology

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BLAST of jgi.p|Trimin1|338012 vs. uniprot
Match: A0A835YR78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR78_9STRA)

HSP 1 Score: 442 bits (1137), Expect = 6.720e-157
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0

Query:    1 MRMSTGAPQQPVPPLIFVCSPCSVAKFVTCSSGSRSPQSRISSEGWDEEDILHLEQATVPELFGFDTEKIGSYLKLTREAEQLQLGGKTIIIASGAGAPVMHLSSQEDLDGFLLRLGAGGLLAAAATPQVVLKFSQEALAEQCDDYTPQQQKPPDDNADMQLFLTARAVRWNMEVFGGNEDTAIVSVLAPKFLQGGHVVSTRKKEGVCRFVELDGSRLALRPLI 224
            MRMSTGAPQQPVPPLIFVCSPCSVAKFVTCSSGSRSPQSRISSEGWDEEDILHLEQATVPELFGFDTEKIGSYLKLTREAEQLQLGGKTIIIASGAGAPVMHLSSQEDLDGFLLRLGAGGLLAAAATPQVVLKFSQEALAEQCDDYTPQQQKPPDDNADMQLFLTARAVRWNMEVFGGNEDTAIVSVLAPKFLQGGHVVSTRKKEGVCRFVELDGSRLALRPLI
Sbjct:    1 MRMSTGAPQQPVPPLIFVCSPCSVAKFVTCSSGSRSPQSRISSEGWDEEDILHLEQATVPELFGFDTEKIGSYLKLTREAEQLQLGGKTIIIASGAGAPVMHLSSQEDLDGFLLRLGAGGLLAAAATPQVVLKFSQEALAEQCDDYTPQQQKPPDDNADMQLFLTARAVRWNMEVFGGNEDTAIVSVLAPKFLQGGHVVSTRKKEGVCRFVELDGSRLALRPLI 224

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BLAST of jgi.p|Trimin1|338012 vs. uniprot
Match: A0A835YVF4_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.010e-26
Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = 0

Query:  136 QEALAEQCDDYTPQQ-QKPPDDNADMQLFLTARAVRWNMEVFGGNEDTAIVSVLAPKFLQGGHVVSTRKKEGVCRFVELDGSRLALRP 222
            +EALAE+CDD T QQ QK  DD AD+QLFLTARAVR N+++F GN+DTAIV VLAPK LQGG+V   RKKEG  RF+ELDGSR  LRP
Sbjct:   83 EEALAEECDDCTQQQLQKLSDDYADIQLFLTARAVRQNIKMFEGNDDTAIVMVLAPKLLQGGNVAKARKKEGAFRFIELDGSRFKLRP 170

[Close]

BLAST of jgi.p|Trimin1|338012 vs. uniprot
Match: A0A836CNC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNC9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 9.010e-9
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 0

Query:   44 EGWDEED-ILHLEQATVPELFGFDTEKIGSYLKLTREAEQLQLGG------KTIIIASG---AGAPVMHLSSQEDLDGFLLRLGAGGLLAAAATPQVVLKFS 135
            EGW+++D IL+L       LF  D ++IG+YL L R  EQL L        KT+ I  G   +    + L SQ DLD FLLRLGAGGL+ A +T +V  + +
Sbjct:   61 EGWEDKDVILNLLAHDQTRLFRLDNKRIGAYLSLVRTEEQLNLAPDSEPVVKTVFIDFGDKVSNLKEVPLVSQADLDSFLLRLGAGGLVPADSTTKVCTRLA 162

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|338012 vs. uniprot

BLAST of jgi.p|Trimin1|338012 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YR78_9STRA	6.720e-157	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YVF4_9STRA	1.010e-26	70.45	Armadillo-type protein n=1 Tax=Tribonema minus Tax...	[more]
A0A836CNC9_9STRA	9.010e-9	42.16	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_9	contig	Contig_9:1388662..1390570 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|338012	mRNA_3634	Tribonema minus UTEX_B_3156	mRNA	Contig_9 1388662..1390570 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|338012|MIX46775_1_22 ID=Trimin1|338012|MIX46775_1_22|Name=jgi.p|Trimin1|338012|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp
MRMSTGAPQQPVPPLIFVCSPCSVAKFVTCSSGSRSPQSRISSEGWDEED
ILHLEQATVPELFGFDTEKIGSYLKLTREAEQLQLGGKTIIIASGAGAPV
MHLSSQEDLDGFLLRLGAGGLLAAAATPQVVLKFSQEALAEQCDDYTPQQ
QKPPDDNADMQLFLTARAVRWNMEVFGGNEDTAIVSVLAPKFLQGGHVVS
TRKKEGVCRFVELDGSRLALRPLI*