Trimin1|337411|MIX46174_5_39 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337411
Unique NameTrimin1|337411|MIX46174_5_39
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length154
Homology
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A835YSH7_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH7_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.790e-115
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query:    1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR
Sbjct:    1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A835YP08_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP08_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.380e-71
Identity = 100/142 (70.42%), Postives = 118/142 (83.10%), Query Frame = 0
Query:    1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGVGSWSPEEDEKLRTLVGMFGAKWAQ----ICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPG 138
            WS  E E+LR LAEAP  G W DIA+ LGGGR E +CR +WGE+C+ARARE RAGVGSW+PEEDEKL+ LVG++G+KWAQ    IC+HMPGRVGKQCRER+LNHLDP LKKTPWT  ED+LL ELH +++NSWADIAR +PG
Sbjct:    1 WSQEEVEQLRALAEAPDAGSWCDIAQALGGGRGEDACRLKWGELCEARAREARAGVGSWTPEEDEKLKALVGVYGSKWAQASLFICLHMPGRVGKQCRERFLNHLDPKLKKTPWTEHEDSLLVELHQQLSNSWADIARHIPG 142          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.980e-44
Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 0
Query:   52 GRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            G  GVGSW+ +ED++L  LVG+FG KW+QI  HMPGRVGKQCRERYLNHLDPSL+  PWT EE+ LL  LH ++NN WA+IARQ+PGR DNDVKNRWNL+ RR
Sbjct:  623 GPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRR 725          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 3.290e-43
Identity = 71/103 (68.93%), Postives = 84/103 (81.55%), Query Frame = 0
Query:   52 GRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            G  GVGSW+ +ED++L  LV +FG KW+QI  HMPGRVGKQCRERYLNHLDPSL+  PWT EE+ LL  LH ++NN WA+IARQ+PGR DNDVKNRWNL+ RR
Sbjct: 1011 GPKGVGSWTKDEDDRLNDLVKIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRR 1113          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.840e-40
Identity = 70/159 (44.03%), Postives = 94/159 (59.12%), Query Frame = 0
Query:    1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGV--GSWSPEEDEKLRTLVGMFGA---KWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            W+  E   LRV  EA GG  W  IA  LG GRT+  C  RW ++        + G+  G W  EED+ +R +V  +G    +W+ I   +PGR+GKQCRER+ NHLDP++KK  W  EED L+ +   ++ N W +IAR +PGR +N VKNRWN   RR
Sbjct:   14 WTAAEDAELRVAVEAHGGRNWKRIAETLGHGRTDVQCLHRWNKVL-------KPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARR 165          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A3Q1GG84_9TELE (Transcriptional activator Myb-like n=2 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1GG84_9TELE)

HSP 1 Score: 142 bits (358), Expect = 8.840e-40
Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 0
Query:    1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGVGSWSPEEDEKLRTLVGMFGAK-WAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            W+  E E+L+ L E  G   W  IA  L   RT+  C+ RW ++ +    +G      W+ EED+++  LV  +GAK W+ I  H+ GR+GKQCRER+ NHL+P +KKT WT EED ++ + H K+ N WA+IA+ +PGR DN +KN WN   RR
Sbjct:   42 WTREEDEKLKKLVELHGSEDWKLIASLLTQNRTDVQCQHRWQKVLNPELIKG-----PWTKEEDQRVIELVQKYGAKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDQIIYQAHEKLGNRWAEIAKLLPGRTDNAIKNHWNSTMRR 191          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.150e-39
Identity = 69/159 (43.40%), Postives = 94/159 (59.12%), Query Frame = 0
Query:    1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGV--GSWSPEEDEKLRTLVGMFGA---KWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            W+  E   LRV+ E  G   W  +A  LG  RT+  C  RW ++        R G+  G W+ EED  +R +V M+GA   KW+ I   + GR+GKQCRER+ NHLDP++ K  WTPEED ++ E   +  N W+DIA+ +PGR +N VKNRWN   R+
Sbjct:    9 WTKEEDASLRVIVEQHGAKNWRKVAELLGDTRTDVQCLHRWNKVL-------RPGLHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARK 160          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.300e-39
Identity = 63/100 (63.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:   55 GVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            G+GSWS EED +L+ LV + G KWA +   MPGRV KQCRERYLNHLDP L++ PWTPEE+ +L  L    N  WA+I RQ+PGR  NDVKNR+NLIQRR
Sbjct:   19 GIGSWSVEEDARLKALVTVHGCKWALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRR 118          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A835ZB10_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB10_9STRA)

HSP 1 Score: 138 bits (348), Expect = 6.190e-39
Identity = 66/160 (41.25%), Postives = 93/160 (58.13%), Query Frame = 0
Query:    1 WSPLESERLRVLAEAPGGGGWGD-----IARQLGGGRTEASCRARWGEMCDARAREGRAGVGSWSPEEDEKLRTLVGMFGA-KWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
            W+  E E+L+   EA    GW +     IA Q+G GRTE  C+ RW +  +    +G      W+ +ED K+  +V   GA KW ++   +PGR+GKQCRER+ NHL P +KK PW  EED ++    ++  N WADI+  +PGR DN +KNRWN   +R
Sbjct:    5 WTKAEDEKLKAQVEAHQSAGWNNSSWRIIAGQIGNGRTETQCQHRWQKALNPDVHKG-----PWTAKEDAKVIEVVAALGAQKWTKVASFLPGRIGKQCRERWHNHLSPDVKKEPWRDEEDRVIVAKQSQWGNKWADISAHLPGRTDNAIKNRWNSSLKR 159          
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.470e-38
Identity = 65/154 (42.21%), Postives = 93/154 (60.39%), Query Frame = 0
Query:    1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGV--GSWSPEEDEKLRT---LVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWN 149
            W+P E  RLR   +  G   W  IA  +GG RT+  C  RW ++        R G+  G W+  ED  +R     VG+   KW+ +   +PGR+GKQCRER+ NHLDP++K++PWTPEED ++ E   ++ N W +IA+ +PGR +N VKNR+N
Sbjct:    4 WAPDEDARLRDAVDRHGPRSWRAIAEDVGGARTDMQCLHRWNKVL-------RPGLHKGPWTETEDRVVRESVEAVGIAKVKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFN 150          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337411 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSH7_9STRA1.790e-115100.00Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A835YP08_9STRA1.380e-7170.42Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
D7G0Z5_ECTSI1.980e-4469.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W7_9PHAE3.290e-4368.93MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S1GEG8_9STRA4.840e-4044.03Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A3Q1GG84_9TELE8.840e-4043.87Transcriptional activator Myb-like n=2 Tax=Acantho... [more]
A0A7S2BQG7_9STRA1.150e-3943.40Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A836CND7_9STRA1.300e-3963.00Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835ZB10_9STRA6.190e-3941.25Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A836C844_9STRA1.470e-3842.21Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 1..47
e-value: 0.49
score: 19.4
coord: 55..103
e-value: 2.3E-13
score: 60.4
coord: 106..154
e-value: 1.1E-15
score: 68.1
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 57..101
score: 9.964848
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 102..152
score: 10.545467
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..45
score: 8.86167
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 1..41
e-value: 1.74351E-4
score: 35.629
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 58..101
e-value: 1.24704E-11
score: 54.1186
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 109..149
e-value: 1.2338E-11
score: 54.5038
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 59..118
e-value: 1.3E-17
score: 63.8
NoneNo IPR availableGENE3D1.10.10.60coord: 57..106
e-value: 3.6E-19
score: 70.5
NoneNo IPR availableGENE3D1.10.10.60coord: 109..154
e-value: 6.7E-19
score: 69.4
NoneNo IPR availableGENE3D1.10.10.60coord: 1..46
e-value: 2.7E-8
score: 35.8
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 57..153
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 1..41
e-value: 2.8E-6
score: 27.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..49
score: 12.68017
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 57..101
score: 18.462626
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 102..154
score: 23.552126
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 57..148
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_89contigContig_89:11241..14338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337411mRNA_12773Tribonema minus UTEX_B_3156 mRNAContig_89 11241..14338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337411|MIX46174_5_39 ID=Trimin1|337411|MIX46174_5_39|Name=jgi.p|Trimin1|337411|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=154bp
WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAR
EGRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNH
LDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNL
IQRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf