Trimin1|351362|estExt_Genemark1.C_Ctg_880051 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351362
Unique NameTrimin1|351362|estExt_Genemark1.C_Ctg_880051
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length368
Homology
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A835YJY2_9STRA (Hydroxymethylbilane synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY2_9STRA)

HSP 1 Score: 708 bits (1827), Expect = 2.850e-257
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query:    1 MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAAKAGPNSAPVRA 367
            MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAAKAGPNSAPVRA
Sbjct:    1 MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAAKAGPNSAPVRA 367          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: D7FMY2_ECTSI (Hydroxymethylbilane synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY2_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 2.210e-158
Identity = 239/338 (70.71%), Postives = 269/338 (79.59%), Query Frame = 0
Query:   14 VAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMA 351
            V HG  +  S    +++     +RMAGDA++TIGTRGSPLALAQAYETR+ L E+F EL+ EGA+AIQVIKTSGDMILDK L+E+GGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGT+LPC L REDT D FIS+KA     LP G+VIGSASLRRQ+Q+L   P  KVVNFRGNVQTRLRKLDEE+VDAT+LA+AGLKRL MA VAT VL+ D MLPAV+QGAIGIQCRE D T  KYLA L   +TK AVDCERAFLAALDGNCKTPIAGQA++ E   L FRGLIA PDG +  +TTREG   DA  MG +AG ELK+RAG EFF    A
Sbjct:   29 VVHGGAAHTSRAASSTSSGECGVRMAGDALLTIGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPDGSVIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQVATSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGNCKTPIAGQARM-EGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELKKRAGPEFFAEFFA 365          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S2SQX8_9STRA (Hydroxymethylbilane synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX8_9STRA)

HSP 1 Score: 445 bits (1145), Expect = 1.780e-153
Identity = 224/309 (72.49%), Postives = 259/309 (83.82%), Query Frame = 0
Query:   33 RSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERA 341
            R+T+ MA + +V IGTRGSPLALAQAYET+R L E+FPEL  EGA+ I V+KTSGDMILDKAL E+GGKGLFTKELDV LLNKDVDICVHSMKDVPTW+VPGTVLPC L REDTRDVFIS+K     DLP G+VIGSASLRRQ+QI AK P LKVVNFRGNVQTRLRKLD+  VDAT+LAYAGLKR++M   AT ++E D+MLPAV+QGAIGIQCRE DE  LKYL ALN  +TK+ VDCERAFLAALDGNC+TPIAGQA++ ++G L F GL+A+ DG+E+ ETTR G   DA  +G EAGEEL+E+A
Sbjct:   32 RATVSMAAEPIVRIGTRGSPLALAQAYETKRRLGEEFPELADEGAVDIVVLKTSGDMILDKALKEIGGKGLFTKELDVALLNKDVDICVHSMKDVPTWLVPGTVLPCNLPREDTRDVFISNKGKCIADLPDGSVIGSASLRRQAQIQAKNPTLKVVNFRGNVQTRLRKLDDGEVDATLLAYAGLKRMDMTEFATSIIEWDEMLPAVAQGAIGIQCREDDEQALKYLDALNHPETKLCVDCERAFLAALDGNCRTPIAGQARIEDDGQLHFTGLLAKEDGTEIYETTRVGRPEDAVAIGTEAGEELREKA 340          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: W7UC09_9STRA (Hydroxymethylbilane synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC09_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 1.810e-150
Identity = 229/351 (65.24%), Postives = 272/351 (77.49%), Query Frame = 0
Query:    1 MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMA 351
            ++K + + A    +A  F+ P    P  +   R      G   V IGTRGSPLALAQAYET+R L E FPEL  EG + I++IKT+GDMILDKALSE+GGKGLFTKELDV LL  +VDICVHSMKDVPTW+  GTVLPC L RED+RDVFI +KA +  +LP G+VIGSASLRRQ+QILA+ P++KVVNFRGNVQTRLRKL E VVDATMLA AGL R+NM    T +L+ D+MLPAV+QGAIGIQCR  D T LKYLAALN  +TKV VDCER+FLA LDGNCKTPIAGQA+V E+  L F+GL+A PDG+++ ET + G LADA K+GREAGE+LKE+AG EFF+AL A
Sbjct:    4 IRKIVGIFALLPIMAGAFFLP-GVSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIED-KLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYA 352          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A6T6AQC6_DIALT (Hydroxymethylbilane synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A6T6AQC6_DIALT)

HSP 1 Score: 431 bits (1109), Expect = 4.240e-148
Identity = 231/351 (65.81%), Postives = 271/351 (77.21%), Query Frame = 0
Query:    2 QKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDA-VVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMA 351
             ++ ++A     +  GF  P S    A    R+++ MA D  +  IGTRGSPLALAQAYET+RLL + FPEL+ EGAI I  +K++GDMILDKALSE+GGKGLFTKELDV LL  +VDICVHSMKDVPTW+  GTVLPC LEREDTRDVFIS K  T  +LP G+VIGSASLRRQSQILAK P LKVVNFRGNVQTRLRKL    VDAT+LA AGLKR++M    T ++E D+MLPAV+QGAIGIQCR  DE  LKYLAAL  A+TK+AVDCERAFLA LDGNCKTPIAGQA++ E   L FRGL+A+PDGS + ET R G  ++   MG++AGEELK+ AGA+FF ALMA
Sbjct:   10 MRSALLALGLVALTSGFSLPASHSSAARG-RRTSVSMALDKPLCRIGTRGSPLALAQAYETQRLLRDAFPELREEGAITINAMKSTGDMILDKALSEIGGKGLFTKELDVALLANEVDICVHSMKDVPTWLPDGTVLPCNLEREDTRDVFISPKGKTIAELPNGSVIGSASLRRQSQILAKNPTLKVVNFRGNVQTRLRKLAAGDVDATLLALAGLKRMDMTQHLTSIIEWDEMLPAVAQGAIGIQCRSDDERSLKYLAALTHAETKIAVDCERAFLATLDGNCKTPIAGQARM-EGDKLVFRGLVAKPDGSAVFETMRVGSPSEGVAMGKDAGEELKKTAGADFFAALMA 358          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S0LKM4_9EUKA (Hydroxymethylbilane synthase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKM4_9EUKA)

HSP 1 Score: 429 bits (1102), Expect = 1.340e-146
Identity = 223/344 (64.83%), Postives = 273/344 (79.36%), Query Frame = 0
Query:   15 AHGFYSPLSTGPLASAVSRSTLRM-AGDAVVTIGTRGSPLALAQAYETRRLLSEKFP-ELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAA 356
            A   ++P ++   A + SR  + M AG+ +V +GTRGSPLALAQAYET+R L+  FP EL  + A+ I+VIKT+GDM+LDKAL E+GGKGLFTKELDV LLN DVD+CVHSMKDVPTW+VPGT+LPC LEREDTRD +IS   A   +LP G+VIG+ASLRRQ+Q+LAK P LK VNFRGNVQTRL+KL E VVDATMLA+AGL+R++M    T VLE D+MLPAV+QGAIGIQCREGDE +L+YL ALN  +TKVAVDCERAFLAALDGNC+TPIAGQA++ + G L F+GL+++PDGS + ET+R G + DA K+G EAGEELK + G E  E    G+D A
Sbjct:   28 ASAAFAPATSLLAAPSTSRGAVLMSAGEPIVKLGTRGSPLALAQAYETKRRLAAAFPDELADDSAVEIKVIKTTGDMVLDKALKELGGKGLFTKELDVALLNGDVDVCVHSMKDVPTWLVPGTILPCNLEREDTRDAWISASGALPSELPAGSVIGTASLRRQAQLLAKNPGLKCVNFRGNVQTRLKKLQENVVDATMLAHAGLRRMDMTEHITRVLEFDEMLPAVAQGAIGIQCREGDEKILRYLDALNHPETKVAVDCERAFLAALDGNCRTPIAGQARLVD-GQLLFQGLVSKPDGSVVFETSRAGAIEDAVKLGTEAGEELKAKCG-ENMEEFFLGEDIA 369          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S2XXR7_9STRA (Hydroxymethylbilane synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR7_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 4.280e-146
Identity = 219/309 (70.87%), Postives = 255/309 (82.52%), Query Frame = 0
Query:   26 PLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAG 334
            P+ +A+S  +      + + IGTRGSPLALAQAYETR+ L E FPELQ EGAI + V+KT GDMILDKALSE+GGKGLFTKELDV LL  +VDICVHSMKDVPTW+   TVLPC L REDTRD FIS  A +  +L  G+V+GSASLRRQ+Q+LAK P LKVVNFRGNVQTRLRKLDE +VDAT+LA AGL+R++MA VAT VLEMD+MLPAV+QGAIGIQCRE DE  LKYLAALN  DT +AV+CERAFL ALDGNCKTPIAGQA + ++  LFF+GLIA+PDGSELLE TREG +ADA +MG++AG
Sbjct:   25 PVKNAISVHSENTMSMSALRIGTRGSPLALAQAYETRKRLMEAFPELQEEGAIELCVMKTQGDMILDKALSEIGGKGLFTKELDVALLGNEVDICVHSMKDVPTWLPEKTVLPCNLPREDTRDAFISPNAGSIAELKDGSVVGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDEGIVDATLLAIAGLRRMDMADVATCVLEMDEMLPAVAQGAIGIQCREDDERSLKYLAALNHMDTHIAVNCERAFLDALDGNCKTPIAGQAWIKDD-KLFFKGLIAKPDGSELLECTREGSIADAVEMGKDAG 332          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S2AXL4_9STRA (Hydroxymethylbilane synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXL4_9STRA)

HSP 1 Score: 425 bits (1092), Expect = 3.240e-145
Identity = 227/341 (66.57%), Postives = 268/341 (78.59%), Query Frame = 0
Query:    1 MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERA 341
            +++A+V+ AA   VA GF + +     +S + R+T  M G+A+V IGTRGSPLALAQAYET++ L E FPEL  + A+++ VIKT+GDM+LDKALSE+GGKGLFTKELDV LLN DVDICVHSMKDVPTW+VPGT+LPC L REDTRD FIS K      LP  AVIGSASLRRQ+Q+LAK P LKVVNFRGNVQTRLRKLD+  VDAT+LA AGLKR++M    T VL  D+MLPAV+QGAIGIQCREGDET LKY+ ALN  DTK+ VD ERAFLAALDGNC+TPIA QA + E+G L FRGLIA  DG++L ETTREG   D   +G +AG ELK+RA
Sbjct:   20 VRRALVLLAATPLVA-GFTTSVFRAKRSSQL-RATPAMEGEALVKIGTRGSPLALAQAYETKKRLGEAFPELAPDDAVSVNVIKTTGDMVLDKALSELGGKGLFTKELDVALLNGDVDICVHSMKDVPTWLVPGTILPCNLPREDTRDAFISPKCDGVASLPDFAVIGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDDGEVDATLLALAGLKRMDMEEFVTTVLSWDEMLPAVAQGAIGIQCREGDETALKYIMALNDEDTKICVDTERAFLAALDGNCRTPIAAQAHI-EDGVLKFRGLIAAEDGTQLEETTREGSPKDGVSIGEDAGAELKKRA 357          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A6S9LNX4_HETAK (Hydroxymethylbilane synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LNX4_HETAK)

HSP 1 Score: 423 bits (1087), Expect = 8.370e-145
Identity = 226/320 (70.62%), Postives = 257/320 (80.31%), Query Frame = 0
Query:   32 SRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFP-ELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALM 350
            S +TL MA   +  IGTRGSPLALAQAYETR+ L   FP EL  +GAI I V+KT GDMILDKALSE+GGKGLFTKELDV LLN +VDICVHSMKDVPTW+   T+LPC L REDTRD FI +K ++ ++LP G+VIGSASLRRQ+Q+LAK P LKVVNFRGNVQTRLRKLDE VVDAT+LA AGLKR++M  VAT VLE D+MLPAV+QGAIGIQCRE DE+  +YLAALN ADTK AVDCERAFL  LDGNCKTPIAGQA + ++G L FRGLIA+PDGS LL   R G L D  +MGREAGEELK +AG  F+   M
Sbjct:   33 SSATLSMA---LCRIGTRGSPLALAQAYETRKRLMAAFPGELDQDGAIEICVMKTQGDMILDKALSEIGGKGLFTKELDVALLNNEVDICVHSMKDVPTWLPETTILPCNLPREDTRDAFICEKYSSVQELPDGSVIGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDEGVVDATLLALAGLKRMDMDDVATKVLEFDEMLPAVAQGAIGIQCRENDESAQRYLAALNHADTKTAVDCERAFLDTLDGNCKTPIAGQAFL-KDGQLHFRGLIAKPDGSVLLTAERVGGLEDGVRMGREAGEELKAQAGPGFYTDFM 348          
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S4BP62_CHRCT (Hydroxymethylbilane synthase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BP62_CHRCT)

HSP 1 Score: 423 bits (1087), Expect = 2.450e-144
Identity = 218/322 (67.70%), Postives = 262/322 (81.37%), Query Frame = 0
Query:   28 ASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFP-ELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGA--EFF 346
            ASA SR      G+A+V +GTRGSPLALAQAYET+R L+  FP EL  + A+ I++IKT+GDM+LDKAL ++GGKGLFTKELDVQLLN DVDICVHSMKDVPTW+VPGT+LPC LEREDTRD +IS K  +  DLP G+VIG+ASLRRQ+Q+LA+ P LK VNFRGNVQTRLRKL+E VVD T+LA AGLKR++M    T VLE D+MLPAV+QGAIGIQCREGD  ++ YLAALN   TKVAVDCERAFLAALDGNC+TPIAGQA++ + G L F+GL+A+PDGS + ET+R G   DA K+G EAGEEL+ + G+  +FF
Sbjct:   42 ASAASRCAAPCMGEALVKLGTRGSPLALAQAYETKRRLALAFPDELADDSAVEIKIIKTTGDMVLDKALKDVGGKGLFTKELDVQLLNGDVDICVHSMKDVPTWLVPGTILPCNLEREDTRDAWISPKGTSPMDLPAGSVIGTASLRRQAQLLARNPGLKCVNFRGNVQTRLRKLEEGVVDGTLLARAGLKRMDMTEHITTVLEFDEMLPAVAQGAIGIQCREGDARIINYLAALNHEPTKVAVDCERAFLAALDGNCRTPIAGQARIVD-GELLFQGLVAKPDGSVIYETSRAGRPEDAVKLGTEAGEELRAKCGSMEDFF 362          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJY2_9STRA2.850e-257100.00Hydroxymethylbilane synthase n=1 Tax=Tribonema min... [more]
D7FMY2_ECTSI2.210e-15870.71Hydroxymethylbilane synthase n=2 Tax=Ectocarpus Ta... [more]
A0A7S2SQX8_9STRA1.780e-15372.49Hydroxymethylbilane synthase n=1 Tax=Rhizochromuli... [more]
W7UC09_9STRA1.810e-15065.24Hydroxymethylbilane synthase n=2 Tax=Monodopsidace... [more]
A0A6T6AQC6_DIALT4.240e-14865.81Hydroxymethylbilane synthase n=2 Tax=Diacronema lu... [more]
A0A7S0LKM4_9EUKA1.340e-14664.83Hydroxymethylbilane synthase n=1 Tax=Coccolithus b... [more]
A0A7S2XXR7_9STRA4.280e-14670.87Hydroxymethylbilane synthase (Fragment) n=1 Tax=Fi... [more]
A0A7S2AXL4_9STRA3.240e-14566.57Hydroxymethylbilane synthase n=1 Tax=Florenciella ... [more]
A0A6S9LNX4_HETAK8.370e-14570.63Hydroxymethylbilane synthase n=1 Tax=Heterosigma a... [more]
A0A7S4BP62_CHRCT2.450e-14467.70Hydroxymethylbilane synthase n=1 Tax=Chrysotila ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000860Porphobilinogen deaminasePRINTSPR00151PORPHBDMNASEcoord: 272..289
score: 51.59
coord: 87..107
score: 63.27
coord: 185..202
score: 59.79
coord: 166..183
score: 52.65
coord: 118..137
score: 53.33
IPR000860Porphobilinogen deaminaseTIGRFAMTIGR00212TIGR00212coord: 45..340
e-value: 3.9E-105
score: 349.0
IPR000860Porphobilinogen deaminasePIRSFPIRSF001438PBGDcoord: 25..355
e-value: 7.2E-115
score: 381.2
IPR000860Porphobilinogen deaminasePANTHERPTHR11557PORPHOBILINOGEN DEAMINASEcoord: 41..346
IPR000860Porphobilinogen deaminaseHAMAPMF_00260Porphobil_deamcoord: 43..340
score: 34.655956
NoneNo IPR availableGENE3D3.40.190.10coord: 145..244
e-value: 2.6E-79
score: 267.3
NoneNo IPR availableGENE3D3.40.190.10coord: 45..252
e-value: 2.6E-79
score: 267.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..337
NoneNo IPR availablePANTHERPTHR11557:SF8BNAC02G01240D PROTEINcoord: 41..346
NoneNo IPR availableCDDcd13648PBP2_PBGD_1coord: 43..321
e-value: 1.34446E-168
score: 469.585
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 44..261
IPR022418Porphobilinogen deaminase, C-terminalPFAMPF03900Porphobil_deamCcoord: 269..338
e-value: 1.7E-16
score: 60.3
IPR022417Porphobilinogen deaminase, N-terminalPFAMPF01379Porphobil_deamcoord: 45..254
e-value: 4.3E-76
score: 255.0
IPR036803Porphobilinogen deaminase, C-terminal domain superfamilyGENE3D3.30.160.40coord: 264..348
e-value: 6.7E-22
score: 79.7
IPR036803Porphobilinogen deaminase, C-terminal domain superfamilySUPERFAMILY54782Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domaincoord: 262..351
IPR022419Porphobilinogen deaminase, dipyrromethane cofactor binding sitePROSITEPS00533PORPHOBILINOGEN_DEAMcoord: 273..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:471214..475652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351362mRNA_11062Tribonema minus UTEX_B_3156 mRNAContig_88 471135..475839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351362|estExt_Genemark1.C_Ctg_880051 ID=Trimin1|351362|estExt_Genemark1.C_Ctg_880051|Name=jgi.p|Trimin1|351362|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=368bp
MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRG
SPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGG
KGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVF
ISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRK
LDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREG
DETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTL
FFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALM
AGKDAAKAGPNSAPVRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000860HemC
IPR022418Porphobilinogen_deaminase_C
IPR022417Porphobilin_deaminase_N
IPR036803Porphobilinogen_deaminase_C_sf
IPR022419Porphobilin_deaminase_cofac_BS