mRNA_11062 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A835YJY2_9STRA (Hydroxymethylbilane synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY2_9STRA) HSP 1 Score: 707 bits (1824), Expect = 3.070e-256 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 3 Query: 24 MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAAKAGPNSAPVRA 1124 MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAAKAGPNSAPVRA Sbjct: 1 MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAAKAGPNSAPVRA 367
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: D7FMY2_ECTSI (Hydroxymethylbilane synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY2_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 1.090e-157 Identity = 239/338 (70.71%), Postives = 269/338 (79.59%), Query Frame = 3 Query: 63 VAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMA 1076 V HG + S +++ +RMAGDA++TIGTRGSPLALAQAYETR+ L E+F EL+ EGA+AIQVIKTSGDMILDK L+E+GGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGT+LPC L REDT D FIS+KA LP G+VIGSASLRRQ+Q+L P KVVNFRGNVQTRLRKLDEE+VDAT+LA+AGLKRL MA VAT VL+ D MLPAV+QGAIGIQCRE D T KYLA L +TK AVDCERAFLAALDGNCKTPIAGQA++ E L FRGLIA PDG + +TTREG DA MG +AG ELK+RAG EFF A Sbjct: 29 VVHGGAAHTSRAASSTSSGECGVRMAGDALLTIGTRGSPLALAQAYETRKRLGEQFDELKEEGAVAIQVIKTSGDMILDKPLTEIGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPDGSVIGSASLRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQVATSVLDQDAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGNCKTPIAGQARM-EGEKLVFRGLIASPDGKQFYDTTREGKPEDAVAMGHDAGMELKKRAGPEFFAEFFA 365
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S2SQX8_9STRA (Hydroxymethylbilane synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX8_9STRA) HSP 1 Score: 445 bits (1145), Expect = 6.130e-153 Identity = 224/309 (72.49%), Postives = 259/309 (83.82%), Query Frame = 3 Query: 120 RSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERA 1046 R+T+ MA + +V IGTRGSPLALAQAYET+R L E+FPEL EGA+ I V+KTSGDMILDKAL E+GGKGLFTKELDV LLNKDVDICVHSMKDVPTW+VPGTVLPC L REDTRDVFIS+K DLP G+VIGSASLRRQ+QI AK P LKVVNFRGNVQTRLRKLD+ VDAT+LAYAGLKR++M AT ++E D+MLPAV+QGAIGIQCRE DE LKYL ALN +TK+ VDCERAFLAALDGNC+TPIAGQA++ ++G L F GL+A+ DG+E+ ETTR G DA +G EAGEEL+E+A Sbjct: 32 RATVSMAAEPIVRIGTRGSPLALAQAYETKRRLGEEFPELADEGAVDIVVLKTSGDMILDKALKEIGGKGLFTKELDVALLNKDVDICVHSMKDVPTWLVPGTVLPCNLPREDTRDVFISNKGKCIADLPDGSVIGSASLRRQAQIQAKNPTLKVVNFRGNVQTRLRKLDDGEVDATLLAYAGLKRMDMTEFATSIIEWDEMLPAVAQGAIGIQCREDDEQALKYLDALNHPETKLCVDCERAFLAALDGNCRTPIAGQARIEDDGQLHFTGLLAKEDGTEIYETTRVGRPEDAVAIGTEAGEELREKA 340
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: W7UC09_9STRA (Hydroxymethylbilane synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC09_9STRA) HSP 1 Score: 437 bits (1124), Expect = 8.800e-150 Identity = 228/330 (69.09%), Postives = 266/330 (80.61%), Query Frame = 3 Query: 99 PLASAVSRSTLRMAGDA----VVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMA 1076 P S + LRMA +A V IGTRGSPLALAQAYET+R L E FPEL EG + I++IKT+GDMILDKALSE+GGKGLFTKELDV LL +VDICVHSMKDVPTW+ GTVLPC L RED+RDVFI +KA + +LP G+VIGSASLRRQ+QILA+ P++KVVNFRGNVQTRLRKL E VVDATMLA AGL R+NM T +L+ D+MLPAV+QGAIGIQCR D T LKYLAALN +TKV VDCER+FLA LDGNCKTPIAGQA+V E+ L F+GL+A PDG+++ ET + G LADA K+GREAGE+LKE+AG EFF+AL A Sbjct: 24 PGVSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIED-KLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYA 352
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A6T6AQC6_DIALT (Hydroxymethylbilane synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A6T6AQC6_DIALT) HSP 1 Score: 431 bits (1109), Expect = 1.450e-147 Identity = 235/354 (66.38%), Postives = 274/354 (77.40%), Query Frame = 3 Query: 18 AAMQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDA-VVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMA 1076 AAM+ A++ A + GF P S A R+++ MA D + IGTRGSPLALAQAYET+RLL + FPEL+ EGAI I +K++GDMILDKALSE+GGKGLFTKELDV LL +VDICVHSMKDVPTW+ GTVLPC LEREDTRDVFIS K T +LP G+VIGSASLRRQSQILAK P LKVVNFRGNVQTRLRKL VDAT+LA AGLKR++M T ++E D+MLPAV+QGAIGIQCR DE LKYLAAL A+TK+AVDCERAFLA LDGNCKTPIAGQA++ E L FRGL+A+PDGS + ET R G ++ MG++AGEELK+ AGA+FF ALMA Sbjct: 8 AAMRSALL-ALGLVALTSGFSLPASHSSAARG-RRTSVSMALDKPLCRIGTRGSPLALAQAYETQRLLRDAFPELREEGAITINAMKSTGDMILDKALSEIGGKGLFTKELDVALLANEVDICVHSMKDVPTWLPDGTVLPCNLEREDTRDVFISPKGKTIAELPNGSVIGSASLRRQSQILAKNPTLKVVNFRGNVQTRLRKLAAGDVDATLLALAGLKRMDMTQHLTSIIEWDEMLPAVAQGAIGIQCRSDDERSLKYLAALTHAETKIAVDCERAFLATLDGNCKTPIAGQARM-EGDKLVFRGLVAKPDGSAVFETMRVGSPSEGVAMGKDAGEELKKTAGADFFAALMA 358
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S0LKM4_9EUKA (Hydroxymethylbilane synthase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKM4_9EUKA) HSP 1 Score: 428 bits (1101), Expect = 6.470e-146 Identity = 222/340 (65.29%), Postives = 272/340 (80.00%), Query Frame = 3 Query: 78 YSPLSTGPLASAVSRSTLRM-AGDAVVTIGTRGSPLALAQAYETRRLLSEKFP-ELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALMAGKDAA 1091 ++P ++ A + SR + M AG+ +V +GTRGSPLALAQAYET+R L+ FP EL + A+ I+VIKT+GDM+LDKAL E+GGKGLFTKELDV LLN DVD+CVHSMKDVPTW+VPGT+LPC LEREDTRD +IS A +LP G+VIG+ASLRRQ+Q+LAK P LK VNFRGNVQTRL+KL E VVDATMLA+AGL+R++M T VLE D+MLPAV+QGAIGIQCREGDE +L+YL ALN +TKVAVDCERAFLAALDGNC+TPIAGQA++ + G L F+GL+++PDGS + ET+R G + DA K+G EAGEELK + G E E G+D A Sbjct: 32 FAPATSLLAAPSTSRGAVLMSAGEPIVKLGTRGSPLALAQAYETKRRLAAAFPDELADDSAVEIKVIKTTGDMVLDKALKELGGKGLFTKELDVALLNGDVDVCVHSMKDVPTWLVPGTILPCNLEREDTRDAWISASGALPSELPAGSVIGTASLRRQAQLLAKNPGLKCVNFRGNVQTRLKKLQENVVDATMLAHAGLRRMDMTEHITRVLEFDEMLPAVAQGAIGIQCREGDEKILRYLDALNHPETKVAVDCERAFLAALDGNCRTPIAGQARLVD-GQLLFQGLVSKPDGSVVFETSRAGAIEDAVKLGTEAGEELKAKCG-ENMEEFFLGEDIA 369
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S2XXR7_9STRA (Hydroxymethylbilane synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR7_9STRA) HSP 1 Score: 425 bits (1093), Expect = 1.450e-145 Identity = 219/309 (70.87%), Postives = 255/309 (82.52%), Query Frame = 3 Query: 99 PLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAG 1025 P+ +A+S + + + IGTRGSPLALAQAYETR+ L E FPELQ EGAI + V+KT GDMILDKALSE+GGKGLFTKELDV LL +VDICVHSMKDVPTW+ TVLPC L REDTRD FIS A + +L G+V+GSASLRRQ+Q+LAK P LKVVNFRGNVQTRLRKLDE +VDAT+LA AGL+R++MA VAT VLEMD+MLPAV+QGAIGIQCRE DE LKYLAALN DT +AV+CERAFL ALDGNCKTPIAGQA + ++ LFF+GLIA+PDGSELLE TREG +ADA +MG++AG Sbjct: 25 PVKNAISVHSENTMSMSALRIGTRGSPLALAQAYETRKRLMEAFPELQEEGAIELCVMKTQGDMILDKALSEIGGKGLFTKELDVALLGNEVDICVHSMKDVPTWLPEKTVLPCNLPREDTRDAFISPNAGSIAELKDGSVVGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDEGIVDATLLAIAGLRRMDMADVATCVLEMDEMLPAVAQGAIGIQCREDDERSLKYLAALNHMDTHIAVNCERAFLDALDGNCKTPIAGQAWIKDD-KLFFKGLIAKPDGSELLECTREGSIADAVEMGKDAG 332
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S2AXL4_9STRA (Hydroxymethylbilane synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXL4_9STRA) HSP 1 Score: 425 bits (1093), Expect = 7.750e-145 Identity = 228/346 (65.90%), Postives = 269/346 (77.75%), Query Frame = 3 Query: 9 HQAAAMQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFPELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERA 1046 H +++A+V+ AA VA GF + + +S + R+T M G+A+V IGTRGSPLALAQAYET++ L E FPEL + A+++ VIKT+GDM+LDKALSE+GGKGLFTKELDV LLN DVDICVHSMKDVPTW+VPGT+LPC L REDTRD FIS K LP AVIGSASLRRQ+Q+LAK P LKVVNFRGNVQTRLRKLD+ VDAT+LA AGLKR++M T VL D+MLPAV+QGAIGIQCREGDET LKY+ ALN DTK+ VD ERAFLAALDGNC+TPIA QA + E+G L FRGLIA DG++L ETTREG D +G +AG ELK+RA Sbjct: 15 HTTMTVRRALVLLAATPLVA-GFTTSVFRAKRSSQL-RATPAMEGEALVKIGTRGSPLALAQAYETKKRLGEAFPELAPDDAVSVNVIKTTGDMVLDKALSELGGKGLFTKELDVALLNGDVDICVHSMKDVPTWLVPGTILPCNLPREDTRDAFISPKCDGVASLPDFAVIGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDDGEVDATLLALAGLKRMDMEEFVTTVLSWDEMLPAVAQGAIGIQCREGDETALKYIMALNDEDTKICVDTERAFLAALDGNCRTPIAAQAHI-EDGVLKFRGLIAAEDGTQLEETTREGSPKDGVSIGEDAGAELKKRA 357
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A6S9LNX4_HETAK (Hydroxymethylbilane synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LNX4_HETAK) HSP 1 Score: 423 bits (1087), Expect = 2.840e-144 Identity = 226/320 (70.62%), Postives = 257/320 (80.31%), Query Frame = 3 Query: 117 SRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFP-ELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGAEFFEALM 1073 S +TL MA + IGTRGSPLALAQAYETR+ L FP EL +GAI I V+KT GDMILDKALSE+GGKGLFTKELDV LLN +VDICVHSMKDVPTW+ T+LPC L REDTRD FI +K ++ ++LP G+VIGSASLRRQ+Q+LAK P LKVVNFRGNVQTRLRKLDE VVDAT+LA AGLKR++M VAT VLE D+MLPAV+QGAIGIQCRE DE+ +YLAALN ADTK AVDCERAFL LDGNCKTPIAGQA + ++G L FRGLIA+PDGS LL R G L D +MGREAGEELK +AG F+ M Sbjct: 33 SSATLSMA---LCRIGTRGSPLALAQAYETRKRLMAAFPGELDQDGAIEICVMKTQGDMILDKALSEIGGKGLFTKELDVALLNNEVDICVHSMKDVPTWLPETTILPCNLPREDTRDAFICEKYSSVQELPDGSVIGSASLRRQAQLLAKNPTLKVVNFRGNVQTRLRKLDEGVVDATLLALAGLKRMDMDDVATKVLEFDEMLPAVAQGAIGIQCRENDESAQRYLAALNHADTKTAVDCERAFLDTLDGNCKTPIAGQAFL-KDGQLHFRGLIAKPDGSVLLTAERVGGLEDGVRMGREAGEELKAQAGPGFYTDFM 348
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Match: A0A7S4BP62_CHRCT (Hydroxymethylbilane synthase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BP62_CHRCT) HSP 1 Score: 423 bits (1087), Expect = 8.300e-144 Identity = 218/322 (67.70%), Postives = 262/322 (81.37%), Query Frame = 3 Query: 105 ASAVSRSTLRMAGDAVVTIGTRGSPLALAQAYETRRLLSEKFP-ELQAEGAIAIQVIKTSGDMILDKALSEMGGKGLFTKELDVQLLNKDVDICVHSMKDVPTWIVPGTVLPCTLEREDTRDVFISDKAATFEDLPQGAVIGSASLRRQSQILAKRPDLKVVNFRGNVQTRLRKLDEEVVDATMLAYAGLKRLNMAHVATHVLEMDQMLPAVSQGAIGIQCREGDETMLKYLAALNCADTKVAVDCERAFLAALDGNCKTPIAGQAKVTENGTLFFRGLIARPDGSELLETTREGPLADAEKMGREAGEELKERAGA--EFF 1061 ASA SR G+A+V +GTRGSPLALAQAYET+R L+ FP EL + A+ I++IKT+GDM+LDKAL ++GGKGLFTKELDVQLLN DVDICVHSMKDVPTW+VPGT+LPC LEREDTRD +IS K + DLP G+VIG+ASLRRQ+Q+LA+ P LK VNFRGNVQTRLRKL+E VVD T+LA AGLKR++M T VLE D+MLPAV+QGAIGIQCREGD ++ YLAALN TKVAVDCERAFLAALDGNC+TPIAGQA++ + G L F+GL+A+PDGS + ET+R G DA K+G EAGEEL+ + G+ +FF Sbjct: 42 ASAASRCAAPCMGEALVKLGTRGSPLALAQAYETKRRLALAFPDELADDSAVEIKIIKTTGDMVLDKALKDVGGKGLFTKELDVQLLNGDVDICVHSMKDVPTWLVPGTILPCNLEREDTRDAWISPKGTSPMDLPAGSVIGTASLRRQAQLLARNPGLKCVNFRGNVQTRLRKLEEGVVDGTLLARAGLKRMDMTEHITTVLEFDEMLPAVAQGAIGIQCREGDARIINYLAALNHEPTKVAVDCERAFLAALDGNCRTPIAGQARIVD-GELLFQGLVAKPDGSVIYETSRAGRPEDAVKLGTEAGEELRAKCGSMEDFF 362 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351362 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11062 ID=mRNA_11062|Name=jgi.p|Trimin1|351362|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1206bp|location=Sequence derived from alignment at Contig_88:471135..475839- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCGAACAACACCAAGCAGCAGCCATGCAAAAAGCAATCGTCGTCGCTGCTback to top protein sequence of jgi.p|Trimin1|351362 >Trimin1|351362|estExt_Genemark1.C_Ctg_880051 ID=Trimin1|351362|estExt_Genemark1.C_Ctg_880051|Name=jgi.p|Trimin1|351362|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=368bp MQKAIVVAAACAGVAHGFYSPLSTGPLASAVSRSTLRMAGDAVVTIGTRGback to top mRNA from alignment at Contig_88:471135..475839- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11062 ID=mRNA_11062|Name=jgi.p|Trimin1|351362|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4705bp|location=Sequence derived from alignment at Contig_88:471135..475839- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_88:471135..475839- >mRNA_11062 ID=mRNA_11062|Name=jgi.p|Trimin1|351362|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1104bp|location=Sequence derived from alignment at Contig_88:471135..475839- (Tribonema minus UTEX_B_3156 )back to top |