mRNA_11026 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171978
Unique NamemRNA_11026
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YL30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL30_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 1.310e-148
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1 
Query:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPLAHCCKHVF 774
            MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPLAHCCKHVF
Sbjct:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPLAHCCKHVF 258
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A836C8J6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 7.610e-35
Identity = 113/296 (38.18%), Postives = 138/296 (46.62%), Query Frame = 1 
Query:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMH------DMAHLAAERKLSRAGAC----------EAMIAALVQHSLDASVQEAAISVAISLLCGSASN----------------------------------------------------------GRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAALATAIRLVHRYHQGPLDAVACLA 666
            MAAHQQHAVLSCEA +VAMMR+FP SASVQ+WGA    C+M        MA L     L RAGAC          EA++AAL+ H L+  VQEAA++ A +L+CGS SN                                                                                          +L A+ SL   FTRRDALKF + GGA  LVAVMNAH F G VQQA+A+VL+ LA    T+AI+ +F+AAGA AA+      V ++    LDAVACLA
Sbjct:    1 MAAHQQHAVLSCEAKMVAMMRQFPQSASVQRWGA----CAMVRRVQRLPMARLTIVHNLGRAGACVXXXXXXXXXEAIVAALLAHRLNVRVQEAALAAAGTLVCGSRSNWLKLKAXXXXXXXXXXXXXXXXXXXXXXYAAGVIAEIAEATRSFDVATASRAAHSSEHAATKEALMAAGVNTALVRALQTHCGSHKMVWRILYALISLTSAFTRRDALKFCSAGGANTLVAVMNAHPFHGYVQQAAARVLIQLAGTGGTDAIANKFIAAGASAAVTAVFHNVPQFAS--LDAVACLA 290
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835Z964_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z964_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.450e-12
Identity = 50/96 (52.08%), Postives = 59/96 (61.46%), Query Frame = 1 
Query:    1 MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLA-AERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGR 285
            MAAHQQHA   C  H+V MM+ FP  AS Q+WGARA +  + D      A R+L RAGACEA+ AAL  H   ASVQ AA+  A  L+  SA N R
Sbjct:    1 MAAHQQHAPQRCHVHVVQMMQTFPGCASAQRWGARAIARIIRDDGTQDFAARELGRAGACEAVAAALAAHLAVASVQGAALHAASKLVRESARNWR 96
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835ZA66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA66_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.750e-12
Identity = 79/244 (32.38%), Postives = 106/244 (43.44%), Query Frame = 1 
Query:   55 MMRKFPDSASVQKWGARASSCSMHDMAH---LAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISL----------------------------------LCGS----------ASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--VLCA----VTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLANKD--DTNAISMQFVAAGAGAALATAIRLV 621
            MM+KFPDSA VQ WGARA    +H+        A R+L RAGACEA+ AA   +   ASVQ+AA+  A +L                                  LCG+          AS G                                 ++CA    V SLA  +T  +AL F T GGA+A+VA ++AH FD +V+  S   L  L + D    NA++ QF+AAGA AA+   +R +
Sbjct:    1 MMQKFPDSARVQLWGARAIDRIIHNAGFGGFQIAARELGRAGACEAVAAASDAYRQVASVQQAALEAAGALVYKLACNWQRFNAAGLCPSVVASMREHAFNSDIQLCGACIIEYILDLTASVGEATEHVAAKNSLMSARADSVLLRALQNHRRDPLIVCARLDAVESLAGAWTAAEALAFCTAGGAQAVVAFLDAHSFDRNVRTQSLSALTTLIDGDVCGGNAVTAQFLAAGAIAAVTALLRTI 244
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YKL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKL3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.390e-8
Identity = 63/212 (29.72%), Postives = 98/212 (46.23%), Query Frame = 1 
Query:    4 AAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARA-SSCSMHDMAHLAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLA--NKDDTNAISMQFVAAGAGAALATAIRLVHRY 630
            A  Q HA ++CE  +  MMR FP+ AS+Q W ARA S+ ++ +    A +R L +AGAC A+++ALV+H  +A+VQ A      +LL    +  R                             +V     + A +  RR A +       +A+VA M   V    +Q A+A  +  +   N +   AI+ Q + AGAG AL  A+ +  R+
Sbjct:    3 AGRQLHATVACEEQVARMMRSFPNDASIQVWAARAISALTVDEPNDSAIQRSLGQAGACAALVSALVKHRPNATVQFATAGATDALLAAVRARLRYSTVPRQALYALGAM--------------AVRPNEPADATLLLRRHAAQV-----VQAIVAAMRIDVTHQDLQAAAATAIERIMEHNNNGGAAIAQQLLDAGAGNALMEALAVSTRH 195
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YNT0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.880e-8
Identity = 72/177 (40.68%), Postives = 93/177 (52.54%), Query Frame = 1 
Query:   13 QQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAH--LAAERKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLCAVTSLAPVFTRRDALKFSTTGGARALVAVMNAHVFDGSVQQASAQVLMDLA 537
            Q H  L CEA +V MMR FP+ A +Q W ARA      D ++      R L +AGAC A++ ALV H  +A+VQ  A+    SL  G  +N           XXXXXXXXXXXXXXXXXXXX     + S A       A++ +T G   ALVA + AH+    V + +   +  LA
Sbjct:    6 QLHPTLMCEAQVVRMMRTFPEDAGIQVWAARAIEKLSADESYGDRTTRRSLGQAGACAALVTALVTHCHNAAVQTTALRAVCSLAKGCPANCGIFQDADIATXXXXXXXXXXXXXXXXXXXXXXXXXLVSAASSAGVNCAVQLATVGATDALVAAVRAHIQHAMVPKQALYAMYTLA 182
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YIN6_9STRA (Cupin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN6_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 1.360e-140
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1 
Query:    1 MARLFISAVANDGATINYATPTRSVFRTQFDDASFKFDLDASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDAESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPSEPVAGAIGITVAELEALAAASPSSPALQRDCLAKCGLSG 630
            MARLFISAVANDGATINYATPTRSVFRTQFDDASFKFDLDASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDAESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPSEPVAGAIGITVAELEALAAASPSSPALQRDCLAKCGLSG
Sbjct:    1 MARLFISAVANDGATINYATPTRSVFRTQFDDASFKFDLDASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDAESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPSEPVAGAIGITVAELEALAAASPSSPALQRDCLAKCGLSG 210
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.360e-45
Identity = 92/205 (44.88%), Postives = 129/205 (62.93%), Query Frame = 1 
Query:   34 DGATINYATPTRSVFRTQF-DDASFKFDLDASAVVVGDGGVIG-VASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDA--ESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGV-TLLTTPFGALATLPS--EPVAGAIGITVAELEALAAASPSSPAL-QRDCLAKCGL 624
            D A++++A PTR+ FR QF D+  FKFDLD S    G+GG      S  Q+P+L GE +AM ++ L+PCGIN+PHV    TE++Y +DA  E VLTAF +E G GRT+ NT+ TG+  F P+GL  ++ NM CTPA ++ A+ S+D+GV T+ TT    LA      E +A A+GI+  +L  L    P  PA+   +C  +CGL
Sbjct:   37 DEASLSFALPTRAAFRAQFTDNTDFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENG-GRTIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.150e-40
Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 1 
Query:   40 ATINYATPTRSVFRTQF-DDASFKFDLDASAVVVGDGGVIG-VASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDA--ESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPS-----EPVAGAIGITVAELEALAAASPSSPAL-QRDCLAKCGL 624
            A +++A PTR+ FR QF ++  F F++DAS    G+GG      S  Q+P+L GE +AM ++ L PCGIN+PHV    TE++Y IDA  E VLTAF +E G GRT+ NT+ TG+  F P+GL  ++ NM C PA ++ A+ S+D+GV  +T+   AL  L +     E +A A+GI   +L  L    P  PA+   +C  +CGL
Sbjct:   40 AVVSFALPTRAAFRAQFVNNEDFTFNIDASKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLQPCGINLPHVHPRATEILYVIDAPAEGVLTAFVEENG-GRTIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITS--AALKGLAAAEGLGEGLAAALGIAQDQLALLVGGFPDGPAIGAAECRQRCGL 241
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.010e-37
Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = 1 
Query:   79 RTQF-DDASFKFDLDASAVVVGDGGVIG-VASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDA--ESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGV-TLLTTPFGALATLPS--EPVAGAIGITVAELEALAAASPSSPAL-QRDCLAKCGL 624
            R QF D+  FKFDL  S    G+GG      S  Q+P+L GE +AM ++ L+PCGIN+PHV    TE++Y +DA  E VLTAF +E G GRT+ NT+  G+  F P+GL  ++ NM CTPA ++ A+ S+D+GV T+ TT    LA      E +A A+GI+  +L  L    P  PA+   +C  +CGL
Sbjct:    1 RAQFTDNTDFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENG-GRTIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A836CHA5_9STRA (RmlC-like cupin domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.130e-34
Identity = 82/202 (40.59%), Postives = 114/202 (56.44%), Query Frame = 1 
Query:   46 INYATPTRSVFRTQFDDASFKFDLDASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDA--ESVLTAFADETGT---GRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGV-TLLTTPFGALATLPS--EPVAGAIGITVAELEALAAASPSSPAL-QRDCLAKCGL 624
            +N+A PTR+ FR QF    FKFDL    V  G+GG +      Q+P+L GE +AM      PCGIN+PHV    TE+++ +DA  E VL AF +E       R + NT+ TG  TF P+GLV ++ NM CTPA ++ A+ S+D+GV T+ TT    LA   +  E  A A GI+  +L  L    P +PA    +C  +C +
Sbjct:   47 VNFALPTRAAFRAQFPPEEFKFDLAGLDVPPGEGGSVQALGAAQLPSLTGEKVAM------PCGINLPHVHPRATEILFVVDAAPEGVLMAFVEENVAMQGPRAITNTVTTGQATFFPQGLVHMQVNMGCTPATMIAALGSDDFGVQTITTTAIAGLAYDENLKEGTAAAFGISQDQLIHLVEGFPGNPAAGAEECRQRCNI 242
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 6.840e-32
Identity = 78/185 (42.16%), Postives = 104/185 (56.22%), Query Frame = 1 
Query:   82 TQFDDASFKFDL---DASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDAESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPSEPVAGAIGITVAELEALAAASPSSPAL-QRDCLAKCGL 624
            T F+   F F L   +  A V  DG  I  A++ QIPAL G+GIAMA + LD C IN+PH+    TEM Y I+ E +  AF +E G    VVN L  GDVTF P+GL+  E N+ C P   L A+N++D G   +TT F  L   PSE +  ++      L+ L  + P +PA  +R CL +CGL
Sbjct:   35 TMFNPEDFVFTLGGPEPDAPV--DGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFEL---PSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A836CH04_9STRA (Cupin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH04_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.450e-28
Identity = 76/201 (37.81%), Postives = 109/201 (54.23%), Query Frame = 1 
Query:   46 INYATPTRSVFRTQFDDASFKFDLDASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDA--ESVLTAFADETGTG---RTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLP--SEPVAGAIGITVAELEALAAASPSSPALQRD-CLAKCGL 624
            IN+A  TR+ F                      GG I V     +P+L GE +AMAR+ L+PCGIN+  +    TE++Y +DA  E VL AF DE   G   R + N + TG+ TF P+GL  ++ N+ CTPA ++ A+ S+D+GV  +T     LA+    +E  A A+GI   +L  L+A  P++PA   D C A+CGL
Sbjct:   39 INFAVSTRAAF---------------------SGGTIQVLGAPTLPSLTGEKVAMARVVLEPCGINLDFI-PRATEILYVVDAAPEGVLMAFVDEFVPGQGPRAITNVVTTGEATFFPQGLGHMQVNLGCTPATMIAALGSDDFGVQTITAVIAGLASDDRLAEGAAAALGIYSDQLAQLSAGFPTNPAAGSDACRARCGL 217
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A0G4EA80_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA80_VITBC)

HSP 1 Score: 103 bits (257), Expect = 2.360e-23
Identity = 67/185 (36.22%), Postives = 98/185 (52.97%), Query Frame = 1 
Query:   76 FRTQFDDASFKFDLDA-SAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDAESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPSEPVAGAIGITVAELEALAAASPSSPALQ-RDCLAKCGL 624
            FR+QF  + F FDL   S V  G GG +  A V  +P+L G G++     L PCG+N   +    +E+ Y I+A  ++  F +E G GRTV NTL TG ++F P+GL+   YN  C  A+ L+  N ED GV  +     AL  + +  +  A+ +  A +  L  + P SP     +CL +CGL
Sbjct:   38 FRSQFGSSQFVFDLARMSPVDAGKGGELRKADVGSMPSLAGNGVSQVLYRLYPCGMNSVQMHPRASELFYVINATELVVGFVEENG-GRTVENTLKTGQLSFVPKGLMHWHYNAGCEDAVFLSTFNHEDPGVVTIV---NALFDINATSLQAALNVDRALVADLKTSVPPSPVPGIAECLRRCGL 218
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A0C3PT82_PHLGI (Cupin type-1 domain-containing protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PT82_PHLGI)

HSP 1 Score: 93.6 bits (231), Expect = 1.530e-19
Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 1 
Query:   16 ISAVANDGATI--NYATPTRSVFRTQF-DDASFKFDL--DASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDAESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPSEPVAGAIG-ITVAELEALAAASPSSPALQRD-CLAKCGL 624
            +  V  D A++  +  T T  V +     D+ + FD    ++ +  G GG    ASV+  PAL G+G+AM    L+PCG+N PH     TE++YA++  ++ +    E G+ R V NT+  G  T  P G V  + N  C P   ++A N ED G   +   +  L   P + VA ++G + V ++  + AA P + AL RD CL +CGL
Sbjct:   17 VDTVRADSASLVTSLKTATNEVAKVNLLQDSDYVFDFFNASTGIASGSGGHAVAASVSNFPALVGQGVAMTVGFLEPCGMNTPHTHPRATEILYAVNG-TLTSGTIGENGS-RFVFNTISPGQATVFPMGSVHYQANEGCAPMTFVSAFNYEDPGTLSMAQRYLGL---PPDVVAASLGNLGVEDVVGIEAALPDNFALGRDECLQRCGL 221
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Match: A0A165U3V2_9APHY (RmlC-like cupin n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165U3V2_9APHY)

HSP 1 Score: 92.8 bits (229), Expect = 9.940e-19
Identity = 68/183 (37.16%), Postives = 97/183 (53.01%), Query Frame = 1 
Query:   94 DASFKFDL---DASAVVVGDGGVIGVASVTQIPALFGEGIAMARITLDPCGINVPHVVTSGTEMVYAIDAESVLTAFADETGTGRTVVNTLHTGDVTFSPRGLVRLEYNMACTPAILLTAINSEDYGVTLLTTPFGALATLPSEPVAGAIG-ITVAELEALAAASPSSPAL-QRDCLAKCGLS 627
            D+ F FD     AS VV G  G + +ASV+  PAL G G+A+    L PCG+N PH     TE +Y ++  ++      ETG+ R +VN +  G     P+G +  ++N  C P   ++A+NSED G TLL      L  LP   VA  +G I V E+ +LA   P   A   ++CL +CG+S
Sbjct:   47 DSEFVFDFLNPPASGVVQGAAGHLVLASVSDFPALVGNGVALLAGFLGPCGMNTPHTHPRATEFLYLVNG-TLQNGMITETGS-RFIVNNMTAGQAMLLPQGSIHFQFNDNCEPVQFVSALNSEDPG-TLLAAQ--GLFGLPPAIVAATLGEIGVQEVASLADKIPDDVAYGSQECLTRCGIS 224
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171978 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YL30_9STRA1.310e-148100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8J6_9STRA7.610e-3538.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z964_9STRA1.450e-1252.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA66_9STRA2.750e-1232.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKL3_9STRA3.390e-829.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNT0_9STRA6.880e-840.68Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
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BLAST of jgi.p|Trimin1|171978 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIN6_9STRA1.360e-140100.00Cupin-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A836CNU2_9STRA3.360e-4544.88RmlC-like cupin domain-containing protein n=7 Tax=... [more]
A0A835Z488_9STRA2.150e-4042.44RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A835YZF9_9STRA1.010e-3743.68RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A836CHA5_9STRA2.130e-3440.59RmlC-like cupin domain-containing protein n=2 Tax=... [more]
D8LDW6_ECTSI6.840e-3242.16Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A836CH04_9STRA1.450e-2837.81Cupin-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A0G4EA80_VITBC2.360e-2336.22Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A0C3PT82_PHLGI1.530e-1933.33Cupin type-1 domain-containing protein n=1 Tax=Phl... [more]
A0A165U3V2_9APHY9.940e-1937.16RmlC-like cupin n=1 Tax=Daedalea quercina L-15889 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:155313..156251 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171978|e_gw1.88.5.1
Hectar predicted targeting categoryother localisation
TranscriptId172300
TrackFilteredModels1
ProteinId171978
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171978gene_11026Tribonema minus UTEX_B_3156 geneContig_88 155313..156251 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171978Trimin1|171978|e_gw1.88.5.1Tribonema minus UTEX_B_3156 polypeptideContig_88 155313..156251 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11026_2exon_11026_2Tribonema minus UTEX_B_3156 exonContig_88 155313..155727 -
exon_11026_1exon_11026_1Tribonema minus UTEX_B_3156 exonContig_88 155890..156251 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11026CDS_11026Tribonema minus UTEX_B_3156 CDSContig_88 155890..156251 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11026 ID=mRNA_11026|Name=jgi.p|Trimin1|171978|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_88:155313..156251- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGCGCACCAGCAGCACGCAGTGCTCTCATGTGAGGCCCACATCGT
GGCAATGATGCGGAAGTTTCCCGACAGTGCCAGCGTACAGAAGTGGGGTG
CGCGCGCCAGCTCTTGCAGCATGCATGACATGGCGCACCTTGCTGCTGAG
CGCAAACTCAGCAGGGCCGGAGCTTGCGAGGCCATGATTGCAGCGCTTGT
CCAGCACTCCCTAGACGCCAGTGTCCAGGAAGCTGCCATCTCCGTCGCAA
TCAGTCTTTTGTGCGGTTCGGCTTCCAATGGGCGTAAAATGAAGGCGGCT
GGCTTGTGCCACCTGGTGGTAGCGGCAATGCGAGCTCATGCTGCGCACTC
GGGGGTGCAGAAGACGGTGTGCAGCGTTCTATGTGCTGTGACATCGCTTG
CACCTGTCTTTACCAGGCGTGATGCGCTCAAGTTCAGCACCACAGGTGGC
GCTAGAGCACTTGTCGCGGTCATGAATGCACACGTCTTTGATGGCAGCGT
GCAGCAGGCATCAGCACAGGTACTGATGGACTTGGCAAACAAGGATGACA
CCAATGCCATTTCCATGCAGTTTGTAGCTGCTGGCGCCGGCGCTGCATTG
GCTACAGCAATTCGCCTTGTGCATCGATATCATCAGGGACCGTTGGATGC
AGTAGCATGTCTTGCATGCATGGTGCGGTGCCGCGGCGCAGCTGGCAGCG
GCAGGTGCAGCCGAGGCAGTGCTGGCGGCTGTGTGCGCCAGCACCCGCTC
GCACACTGCTGCAAACATGTATTTTAA
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protein sequence of jgi.p|Trimin1|171978

>Trimin1|171978|e_gw1.88.5.1 ID=Trimin1|171978|e_gw1.88.5.1|Name=jgi.p|Trimin1|171978|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp
MAAHQQHAVLSCEAHIVAMMRKFPDSASVQKWGARASSCSMHDMAHLAAE
RKLSRAGACEAMIAALVQHSLDASVQEAAISVAISLLCGSASNGRKMKAA
GLCHLVVAAMRAHAAHSGVQKTVCSVLCAVTSLAPVFTRRDALKFSTTGG
ARALVAVMNAHVFDGSVQQASAQVLMDLANKDDTNAISMQFVAAGAGAAL
ATAIRLVHRYHQGPLDAVACLACMVRCRGAAGSGRCSRGSAGGCVRQHPL
AHCCKHVF*
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mRNA from alignment at Contig_88:155313..156251-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11026 ID=mRNA_11026|Name=jgi.p|Trimin1|171978|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=939bp|location=Sequence derived from alignment at Contig_88:155313..156251- (Tribonema minus UTEX_B_3156 )
ATGGCGGCGCACCAGCAGCACGCAGTGCTCTCATGTGAGGCCCACATCGT
GGCAATGATGCGGAAGTTTCCCGACAGTGCCAGCGTACAGAAGTGGGGTG
CGCGCGCCAGCTCTTGCAGCATGCATGACATGGCGCACCTTGCTGCTGAG
CGCAAACTCAGCAGGGCCGGAGCTTGCGAGGCCATGATTGCAGCGCTTGT
CCAGCACTCCCTAGACGCCAGTGTCCAGGAAGCTGCCATCTCCGTCGCAA
TCAGTCTTTTGTGCGGTTCGGCTTCCAATGGGCGTAAAATGAAGGCGGCT
GGCTTGTGCCACCTGGTGGTAGCGGCAATGCGAGCTCATGCTGCGCACTC
GGGGGTGCAGAAGTGCGGAGCTGATGCAATCATGGTACTTGCAGAGGGGA
TGCGACGCTTTGGCGCAATCGCTGCACATGGTGCCGAGCGTGTTGCAATC
AAGGATGAGCTGATGGCCGCTGGTGTCAGTACTGGTCTTTTGCGGGCGCT
TCAGACGCACCGCCTCAACCAGAGGACGGTGTGCAGCGTTCTATGTGCTG
TGACATCGCTTGCACCTGTCTTTACCAGGCGTGATGCGCTCAAGTTCAGC
ACCACAGGTGGCGCTAGAGCACTTGTCGCGGTCATGAATGCACACGTCTT
TGATGGCAGCGTGCAGCAGGCATCAGCACAGGTACTGATGGACTTGGCAA
ACAAGGATGACACCAATGCCATTTCCATGCAGTTTGTAGCTGCTGGCGCC
GGCGCTGCATTGGCTACAGCAATTCGCCTTGTGCATCGATATCATCAGGG
ACCGTTGGATGCAGTAGCATGTCTTGCATGCATGGTGCGGTGCCGCGGCG
CAGCTGGCAGCGGCAGGTGCAGCCGAGGCAGTGCTGGCGGCTGTGTGCGC
CAGCACCCGCTCGCACACTGCTGCAAACATGTATTTTAA
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Coding sequence (CDS) from alignment at Contig_88:155313..156251-

>mRNA_11026 ID=mRNA_11026|Name=jgi.p|Trimin1|171978|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_88:155313..156251- (Tribonema minus UTEX_B_3156 )
ATGGCGGCGCACCAGCAGCACGCAGTGCTCTCATGTGAGGCCCACATCGT
GGCAATGATGCGGAAGTTTCCCGACAGTGCCAGCGTACAGAAGTGGGGTG
CGCGCGCCAGCTCTTGCAGCATGCATGACATGGCGCACCTTGCTGCTGAG
CGCAAACTCAGCAGGGCCGGAGCTTGCGAGGCCATGATTGCAGCGCTTGT
CCAGCACTCCCTAGACGCCAGTGTCCAGGAAGCTGCCATCTCCGTCGCAA
TCAGTCTTTTGTGCGGTTCGGCTTCCAATGGGCGTAAAATGAAGGCGGCT
GGCTTGTGCCACCTGGTGGTAGCGGCAATGCGAGCTCATGCTGCGCACTC
GGGGGTGCAGAAGACGGTGTGCAGCGTTCTATGTGCTGTGACATCGCTTG
CACCTGTCTTTACCAGGCGTGATGCGCTCAAGTTCAGCACCACAGGTGGC
GCTAGAGCACTTGTCGCGGTCATGAATGCACACGTCTTTGATGGCAGCGT
GCAGCAGGCATCAGCACAGGTACTGATGGACTTGGCAAACAAGGATGACA
CCAATGCCATTTCCATGCAGTTTGTAGCTGCTGGCGCCGGCGCTGCATTG
GCTACAGCAATTCGCCTTGTGCATCGATATCATCAGGGACCGTTGGATGC
AGTAGCATGTCTTGCATGCATGGTGCGGTGCCGCGGCGCAGCTGGCAGCG
GCAGGTGCAGCCGAGGCAGTGCTGGCGGCTGTGTGCGCCAGCACCCGCTC
GCACACTGCTGCAAACATGTATTTTAA
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