Trimin1|351326|estExt_Genemark1.C_Ctg_870038 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351326
Unique NameTrimin1|351326|estExt_Genemark1.C_Ctg_870038
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length281
Homology
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YLQ0_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ0_9STRA)

HSP 1 Score: 593 bits (1530), Expect = 6.120e-215
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query:    1 MSNPPRVGVTTDTVDINDLEDEVNAKLQNVNIYQDVRKLADAWEWIPPLDDHKGVSMVMEFQDAKLQDILDGKFDSDMKNVAKVAKEDGRRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGGSRSDWFYGAFKSIADGHYPRMRLINFFLENKDMDWRLNTQSEKDAFGRGLRLLRP 280
            MSNPPRVGVTTDTVDINDLEDEVNAKLQNVNIYQDVRKLADAWEWIPPLDDHKGVSMVMEFQDAKLQDILDGKFDSDMKNVAKVAKEDGRRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGGSRSDWFYGAFKSIADGHYPRMRLINFFLENKDMDWRLNTQSEKDAFGRGLRLLRP
Sbjct:    1 MSNPPRVGVTTDTVDINDLEDEVNAKLQNVNIYQDVRKLADAWEWIPPLDDHKGVSMVMEFQDAKLQDILDGKFDSDMKNVAKVAKEDGRRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGGSRSDWFYGAFKSIADGHYPRMRLINFFLENKDMDWRLNTQSEKDAFGRGLRLLRP 280          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YVC0_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC0_9STRA)

HSP 1 Score: 212 bits (540), Expect = 9.570e-65
Identity = 117/255 (45.88%), Postives = 157/255 (61.57%), Query Frame = 0
Query:   25 AKLQNVNIYQDVRKLADAWEWI--PPLDDHKGVSMVMEFQD---AKLQDILDGKFDSDMKNVAKVAKEDG-RRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETS-TSGVGGSRSDWFYGAFKSIADGHYPRMRLINFFLENKDMDWRLNTQSEKDAFG 272
            AK Q V  YQ V  L   ++++  P LD  K V +V EF D   A LQ I DGKFD  +       K DG R+VW+RP+HEFN DWYSWGTYR+G    N++  FK+AF+ +  +F+  GA N ++QL YN  +P++D   FS WWPG DVVDM+ CS YNRAG+DS H+ ++SF +VY   Y +M  LD    LGV ETS T+    S+  W   AF ++ +  + R+   N+FL NKD +W LN+  E+ AFG
Sbjct:    2 AKFQTVVKYQSVTGLPGQYKYLVKPYLDAGKSVVLVTEFIDGSYANLQAIGDGKFDWALNKFIDDWKADGNRQVWIRPMHEFNGDWYSWGTYRNG----NSQALFKRAFQHVAYVFKNRGA-NAKFQLGYNCVNPRNDGTSFSNWWPGGDVVDMILCSGYNRAGLDSNHQSWQSFSDVYSSGYYKMAALDGGKPLGVAETSSTTWQSYSKPQWIKDAFNALVN-KFTRVEQCNWFLINKDGNWGLNSDDERHAFG 250          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YT60_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT60_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.860e-62
Identity = 98/213 (46.01%), Postives = 137/213 (64.32%), Query Frame = 0
Query:   64 AKLQDILDGKFDSDMKN-VAKVAKEDGRRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGGSRSDWFYGAFKSIADGHYPRMRLINFFLENKDMDWRLNTQSEKDAFGRGL 275
            + LQ I+DG FD  +   +  +     +++W+R LHEFN DWY WGTYRDG    N  D FK+AFR +V +FR  GA N+++QL+YN ++P DD + F +W+PG DVVDM+ CS YNRAG+DS H  ++SF EV+   Y +M  LD    LGV ETS++  GG ++ W   AF ++ +  + R+   N+FL NK  DW LN+ SE+ AFG  L
Sbjct:   64 SNLQQIIDGAFDGQLNGFIDDMMSHGNQQMWIRHLHEFNGDWYPWGTYRDG----NDTDTFKRAFRHVVDVFRGRGA-NVKFQLAYNCDNPNDDGKSFHDWYPGGDVVDMILCSGYNRAGVDSDHTSWQSFSEVFSSGYYKMASLDGGKPLGVAETSSTSWGGDKAQWIRDAFDAVVN-QFTRVEQCNWFLINKAGDWDLNSDSERHAFGDSL 270          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YW31_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW31_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.440e-60
Identity = 101/241 (41.91%), Postives = 154/241 (63.90%), Query Frame = 0
Query:   41 DAWEWIPP-LDDHKGVSMVMEFQD---AKLQDILDGKFDSDMKNVAKVAKEDG-RRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGGSRSDWFYGAFKSIADGHYPRMRLINFFLENKDMDWRLNTQSEKDAFGRGLR 276
            D W  + P LD    V +V++F       LQ+I DG++D+ +       K+DG RR+ +RP+HEFN DWY WGT+R G    N++D FK+AF+ +  +F++ GA N++ QL+YN +S ++D  PF++W+PG DVVD++ CSAYNR+G++ +   ++SFDEV+G  YDRM  +     LG+GET ++  GG +  W   AF  +    Y R++  ++ LENK+ DW LNT  +  AFG G+R
Sbjct:    1 DYWNTVKPALDKVDDVVLVVQFDTYDYTNLQEIGDGRYDASLNQFIDAWKDDGNRRLSIRPMHEFNGDWYPWGTFRGG---GNSKDNFKRAFQHVAGVFKRRGA-NVKMQLAYNCDSAQNDGSPFADWYPGDDVVDIILCSAYNRSGLEGH--GWESFDEVFGGGYDRMASIPGNKPLGLGETGSTDWGGDKPAWISDAFNQLVY-KYTRVQECHWLLENKEGDWDLNTDGDVWAFGDGMR 234          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YS57_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS57_9STRA)

HSP 1 Score: 205 bits (521), Expect = 6.190e-60
Identity = 111/274 (40.51%), Postives = 166/274 (60.58%), Query Frame = 0
Query:    7 VGVTTDT-VDINDLEDEVNAKLQNVNIYQDVRKLADAWEWI--PPLDDHKGVSMVMEFQDAK---LQDILDGKFDSDMKNVAKVAKEDGRR-VWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGE-TSTSGVGGSRSDWFYGAFKSIADGHYPRMRLINFFLENKDMDWRLNTQSEKDAFG 272
            +G+  D+ +   D E  + AK Q V  YQ V  L   ++++  P L+  + V ++ EF D     LQ I DG FDS +       + DG R VW+RP+HEFN DWY  GTYR G    N+ D+FK+A+R +V++FR  GA N ++QL+YN ++ ++D + F  WWPG+  VDMV CS YNRAG+D+ H+ ++SF +VY   Y++M  L     LG+ E +ST+    S+  W   AF ++    + R+R +N+FL NK+ DW LN+ +E+ AFG
Sbjct:   56 IGIADDSSISPTDREKLIGAKFQTVQKYQKVSDLPGKYQYLVEPHLNAGRTVVLMTEFDDGSYVDLQAIGDGAFDSYLNKFIDEWQADGNRTVWIRPMHEFNGDWYPCGTYRTG----NSSDKFKRAYRHVVSVFRNRGA-NAKFQLAYNCDNARNDSKSFGVWWPGKYAVDMVVCSGYNRAGLDADHQKWQSFSDVYSSGYNKMAALPGLKPLGIAEMSSTTWQSYSKPQWIRDAFDAVVT-KFTRVRQLNWFLINKEGDWGLNSDAERQAFG 323          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835Z3A8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3A8_9STRA)

HSP 1 Score: 192 bits (488), Expect = 2.210e-55
Identity = 108/288 (37.50%), Postives = 167/288 (57.99%), Query Frame = 0
Query:    7 VGVTTDTVDINDLEDEVNAKLQNVNIYQDVRKLADAWEWIPPLDDHKG--VSMVMEFQDAK-----LQDILDGKFDSDMKNVAKVAKEDGR----RVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGA-TNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAG-IDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGGS--RSDWFYGAFKSIADGH-YPRMRLINFFLENKDMDWRLNTQSEKDAFGRGLRLL 278
            +GV+  ++ I+D E +V A +     +Q    +   W+         G  + +V+EF +       L  +L G +D   K + K+ +  GR    RVW+R LHEFNSDWY WGT+++G    N+  +FK+A+R IV   R+ GA  N+++QLSYN  S   D   FS+WWPG   VDM+  +AYNRAG ++   K F+ F E +  +Y R+  L  T  +G+ E  ++   G+  ++DW+Y  FK++ + H +PR+  +NFFLE+K  DWRL+T+ E+  FG G+RLL
Sbjct:   95 IGVSMGSMAIDDREKQVGAHIPIAMTFQPCMNVLKTWDDEIVRRQKLGHEIVLVLEFNETSKKVKALDLVLSGFYD---KKLRKIGRRFGRMKKHRVWVRILHEFNSDWYPWGTFKEG----NSIPKFKQAYRYIVKRLRKHGAGDNIKFQLSYNARSSGGDKIDFSKWWPGDAYVDMIMITAYNRAGTLEGTEKPFQQFAEFFPESYKRVAALHPTKPIGISEAGSTDAKGAQAKADWYYNMFKTLKESHAFPRLAQVNFFLEDKIYDWRLDTREEQTRFGDGMRLL 375          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A836CGL5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGL5_9STRA)

HSP 1 Score: 191 bits (484), Expect = 8.280e-55
Identity = 111/262 (42.37%), Postives = 149/262 (56.87%), Query Frame = 0
Query:   22 EVNAKLQNVNIYQDVRKLADAWEWIPPLDDHKGVSMVMEFQDA----KLQDILDGKFDSDMKNVAKVAKEDGRR-VWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNN-NSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGV-GGSRSDWFYGAFKSIADGHYPRMRLINFFLENK-DMDWRLNTQSEKDAFGRGL 275
            E+ AK Q V  +Q V+K+   +   P LD      MVMEF DA     L+ I +G +D  +        +DG R VW+RPLHEFN DWY WGTYR G    NT+  FK+A+R +  +   +GA N+++QL+YN  N   D   PF +WWPG   VDMV CS YNRAG D+ H+ + +F EV+G AY++M  L     LGVGETS +      ++ W   AF    +  YPR+  + +FL+NK D  W LN+  E  AFG  L
Sbjct:   86 ELGAKFQAVVKFQSVQKMRYPFLVKPHLDAGFQSVMVMEFLDATRHTNLKQIANGLYDKYLYKFVDELMDDGNREVWVRPLHEFNGDWYPWGTYRGG---DNTKRMFKRAWRHVHWILTNKGA-NIKFQLAYNCVNGQNDQTTPFLDWWPGEQYVDMVVCSGYNRAGSDADHQQWLTFPEVFGAAYEQMLTLPGMKPLGVGETSCNNFEDNDKAQWIRDAFYDFVNT-YPRIEHVTWFLQNKNDGRWDLNSPEEIAAFGESL 342          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YXK1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXK1_9STRA)

HSP 1 Score: 184 bits (468), Expect = 4.730e-54
Identity = 98/215 (45.58%), Postives = 136/215 (63.26%), Query Frame = 0
Query:   66 LQDILDGKFDSDMKNVAKVAKEDG-RRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGG-SRSDWFYGAFKSIADGHYPRMRLINFFLENKDM--DWRLNTQSEKDAFGRGLR 276
            LQ + +G++D  +       K DG RR+ +RP+HEFN DWY WGTYR G    N++  FK+A+  +  LFR+ GA N   QLSYN  +P DD   F EW+PG + VDMV CSAYNRAGIDS H+ +++F++V+G  Y +M  L    +LGV E  T+  GG S++ W   AFK++ +  Y R+    + L+NKD   DW LNT+SE  AFG+ +R
Sbjct:   16 LQAVGEGRYDKQLNAFIDEWKADGNRRLGIRPMHEFNGDWYEWGTYRGG---SNSKAAFKRAYTHVSRLFRKRGA-NAVMQLSYNCVNPNDDQTSFKEWYPGAEHVDMVLCSAYNRAGIDSDHQKWETFEQVFGWGYKQMAALPGRKRLGVAEMGTTSWGGHSKAQWIRDAFKALVN-QYTRVEEGFWLLQNKDGSGDWNLNTRSEVAAFGQSMR 225          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YWE9_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.620e-53
Identity = 106/268 (39.55%), Postives = 152/268 (56.72%), Query Frame = 0
Query:   20 EDEVNAKLQNVNIYQDVRKLADAWEWIPPLDDHKGVSMVMEFQDA---KLQDILDGKFDSDMKNVA-KVAKEDGRRVWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNN-NSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETSTSGVGGS-RSDWFYGAFKSIADGHYPRMRLINFFLENKDM-DWRLNTQSEKDAFGRGLRLLRP 280
            E+E+NA+ Q V  +  ++ +   +     LD    V +V++F D     L+ I DG +D  +   A ++ K+  R VW+RP+HEFN DWY WGTY  G    NT   F +A+R +  +   +GA N+++QL YN  N   D   PFS WWPG DVVDMV CSAYNRAG D +H  ++++ +V+   YD+M  L  +  LGVGE  T G+ G  ++ W   AF +     YPR+  I +FLE+KD  +W LN+  E +AF   L    P
Sbjct:   42 EEELNAQFQVVTKFGFIKTMRYPFLVKNYLDQGFKVVLVVQFLDTLTTNLKQIGDGLYDKYLYKFADELIKDGNREVWVRPMHEFNGDWYPWGTYMGG---TNTIQNFIRAYRHVYQVLTAKGA-NIKFQLGYNCVNGANDKKTPFSAWWPGDDVVDMVVCSAYNRAGTDQFHTQWQTWPDVFQLGYDQMAALPTSAPLGVGEMGTVGMAGEDKAGWIRDAFAAFPT-LYPRVEQITWFLEDKDDGEWDLNSADEIEAFRDSLLQYTP 304          
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Match: A0A835YZR6_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 8.830e-53
Identity = 119/310 (38.39%), Postives = 168/310 (54.19%), Query Frame = 0
Query:    6 RVGVTTD-TVDINDLEDEVNAKLQNVNIYQDVRKLADAWEWI--PPLDDHKGVSMVMEFQD---AKLQDILDGKFDSDMKNVAKVAKEDGRR-VWMRPLHEFNSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNNNSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPAYDRMKKLDKTVKLGVGETS-TSGVGGSRSDWFYGAFKSIADGHYPRMRLI----------------------------------NFFLENK-DMDWRLNTQSEKDAFG 272
            R+G+  D ++     E  + AK Q V  YQ V++L   ++++  P LD ++ V +V EF D   A LQ I DG FDS +       K DG R +W+RP+HEFN DWYSWGTYR G    N R +F++AF+ +  +F+  GA   + QLSYN ++ + + R F+EW+PG DVVDMV CS YNRAG DSYH  +KSF +V+ P Y+RM  L     LGV ETS T+    S+  W   AF ++ +  + R+                                     N+FL NK  ++W LN+ +E+ AFG
Sbjct:  273 RIGIIDDASITPTSRESLIGAKFQVVVKYQKVKELPGKYKYLLKPHLDANRTVVLVPEFYDGSYANLQAIGDGAFDSYLNKFIDEWKADGNRAMWIRPMHEFNGDWYSWGTYRSG----NDRAKFQRAFKHVAYVFKNRGA-QAKMQLSYNCDNARGENRNFTEWFPGTDVVDMVLCSGYNRAGTDSYHMSWKSFTDVFTPGYNRMAALSGNKPLGVAETSSTTWQSNSKPQWIKDAFYAVVN-KFTRIXXXXXXXXXXXXXXEQFDCIYINKGDTFNCGLDTSQHNWFLINKGSLNWGLNSDAERKAFG 576          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351326 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLQ0_9STRA6.120e-215100.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YVC0_9STRA9.570e-6545.88Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A835YT60_9STRA5.860e-6246.01Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A835YW31_9STRA3.440e-6041.91Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A835YS57_9STRA6.190e-6040.51Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z3A8_9STRA2.210e-5537.50Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CGL5_9STRA8.280e-5542.37Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YXK1_9STRA4.730e-5445.58Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YWE9_9STRA8.620e-5339.55Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YZR6_9STRA8.830e-5338.39GH26 domain-containing protein n=1 Tax=Tribonema m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 6..275
e-value: 1.8E-53
score: 183.7
NoneNo IPR availablePIRSRPIRSR018168-3PIRSR018168-3coord: 79..224
e-value: 1.2E-16
score: 58.8
NoneNo IPR availablePIRSRPIRSR018168-1PIRSR018168-1coord: 79..224
e-value: 1.2E-16
score: 58.8
IPR022790Glycosyl hydrolase family 26 domainPFAMPF02156Glyco_hydro_26coord: 62..182
e-value: 4.9E-10
score: 39.2
IPR022790Glycosyl hydrolase family 26 domainPROSITEPS51764GH26coord: 1..273
score: 29.82757
IPR000805Glycoside hydrolase family 26PANTHERPTHR40079MANNAN ENDO-1,4-BETA-MANNOSIDASE E-RELATEDcoord: 74..259
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 40..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_87contigContig_87:321461..324462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351326mRNA_14767Tribonema minus UTEX_B_3156 mRNAContig_87 321321..324462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351326|estExt_Genemark1.C_Ctg_870038 ID=Trimin1|351326|estExt_Genemark1.C_Ctg_870038|Name=jgi.p|Trimin1|351326|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=281bp
MSNPPRVGVTTDTVDINDLEDEVNAKLQNVNIYQDVRKLADAWEWIPPLD
DHKGVSMVMEFQDAKLQDILDGKFDSDMKNVAKVAKEDGRRVWMRPLHEF
NSDWYSWGTYRDGFEKVNTRDQFKKAFRKIVTLFRQEGATNLRWQLSYNN
NSPKDDPRPFSEWWPGRDVVDMVTCSAYNRAGIDSYHKDFKSFDEVYGPA
YDRMKKLDKTVKLGVGETSTSGVGGSRSDWFYGAFKSIADGHYPRMRLIN
FFLENKDMDWRLNTQSEKDAFGRGLRLLRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022790GH26_dom
IPR000805Glyco_hydro_26
IPR017853Glycoside_hydrolase_SF