mRNA_14753 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835YJS2_9STRA (TRP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS2_9STRA) HSP 1 Score: 809 bits (2089), Expect = 1.110e-295 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1
Query: 1 MVVYLWPTYNVKCGKGVQQSLCRHHIPSWCLCRRQLRVTGHYLRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELDYLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAGFTAAVVPKGTEGVTQEHHHHRHTSGCTEAEMDQVSSSVKATIS 1236
MVVYLWPTYNVKCGKGVQQSLCRHHIPSWCLCRRQLRVTGHYLRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELDYLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAGFTAAVVPKGTEGVTQEHHHHRHTSGCTEAEMDQVSSSVKATIS
Sbjct: 1 MVVYLWPTYNVKCGKGVQQSLCRHHIPSWCLCRRQLRVTGHYLRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELDYLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAGFTAAVVPKGTEGVTQEHHHHRHTSGCTEAEMDQVSSSVKATIS 412
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835ZPJ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ6_9STRA) HSP 1 Score: 311 bits (798), Expect = 1.220e-100 Identity = 165/330 (50.00%), Postives = 226/330 (68.48%), Query Frame = 1
Query: 142 VVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELD-----YLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRV----ASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALL--QKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQT 1098
+V QLL GF+ +TGLA P+ Y + ++F +D T+++GC+A+L+FY KLLA TLAPL + L+G SWL A ++ + G AA L +ALRRHWT FL FL FG VSSVVF TF CE + YLRADYS+QC+ + YW YA YA + VYPIGI AL++VL+W+K KL+ K N + S + RL EASGFLWEQY + +W++ EC RRLL+TGF+AF+LPG QA + ML++F L+A+++ RPHR+R+ +WQY+ GA+I+YLST +ALL +LD + EP S+ +VG +L+ L+VA+I AAVFQT
Sbjct: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLR-RCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQT 329
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835YZL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL6_9STRA) HSP 1 Score: 290 bits (742), Expect = 1.090e-88 Identity = 181/405 (44.69%), Postives = 231/405 (57.04%), Query Frame = 1
Query: 7 VYLWPTYNVKCGKGVQQSLC------RHHIPSWCLCR-RQLRVTGHYLRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQR----SDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELDYLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNS--KIVR---------------------------VASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTF 1101
+YL P K K + C R+ +P CLCR RQ G YLR+PI+V QLLWG + TGL P + I+ A DL LGC A L+F+ KLL +TL PL VVLL SWLL+ R L S AA EALRRHWTAFLAFTFL+FG VSS +FLTF CEE L Y +MLFVYPIGIT L++V++WRK +L + N+ K+ A+ P+ LV AS FLW QYT++ WWE+ EC RRLL+TGF+AFILPG QA V ML AFAS++ + +VRPH++R QY+ G++I+Y+ST +AL KL++ + QSQ IVG +LI+L+VA+I AAV QTF
Sbjct: 189 IYLLPVMETK-RKSRRAIACGWPLWLRNRLPQ-CLCRQRQWSFRGEYLRIPIIVVQLLWGIVAATGLQMPANFQAFFTRIAIAPDL-FALGCAAHLSFFDKLLLVTLLPLLPVVLLVLSWLLSTRRMSVLAPDSADSTAVAAAAAARAEALRRHWTAFLAFTFLIFGGVSSSIFLTFSCEEFPELGKWY----------------LLMLFVYPIGITGLHAVMIWRKRQLDAHRSNNTTAKVPHECENTFGADRSSNGTAPPNSSVALTDAAAATDPQHGLVHASAFLWSQYTDKADWWELVECTRRLLLTGFIAFILPGRAGQAAVSMLFAFASVVVFTVVRPHKERGERCQYLLGSIIIYMSTATALFMKLNVTGDLQSQRIVGALLIMLNVALIVAAVLQTF 574
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835Z836_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z836_9STRA) HSP 1 Score: 278 bits (710), Expect = 8.100e-87 Identity = 158/326 (48.47%), Postives = 208/326 (63.80%), Query Frame = 1
Query: 151 QLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCE---ELD--YLRADYSVQCYT-SEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGN-SKIVRVASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAG 1107
QL+ GF+EVTGL + I ++ +L+ GCV FY+KLLAMTL PL V LLG SWL A R +L+R G +AA +ALR+HWTAFLA TFLV+G VSS++F TF C+ ELD YLRADYS+QCY SEYW Y YA M VYP+G+ ALY++LL K + +G + V L P LV AS FLW QY + WWE+ EC RR+++TG + FILPG+ QA V +L AF + ++ VRPHR+ QY+ GA+I+Y ++M+ALL K ++ QSQ +VGIV+I++S A+I AAV QT G
Sbjct: 23 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGA-QSQLVVGIVMIIISTALIVAAVAQTLYG 347
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835ZGE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE0_9STRA) HSP 1 Score: 293 bits (750), Expect = 2.060e-86 Identity = 174/415 (41.93%), Postives = 229/415 (55.18%), Query Frame = 1
Query: 7 VYLWPTYNVKCGKGVQQSLCRHHIPSWCLCRRQLRVTGHYLRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLM--HQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVC---EELD--YLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVASLAPR-----------------------------------------SRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAG 1107
VY+ P +V +GV P+W R ++ G+YLR+PI+V QL+ GFM +TGL + I ++ D T + GC+ NFYQKLL +TLAPL V LLG SWL + R H ALR+HWTA LAFTFLV+G SS +F TF C EELD YLRADYS++CY YW Y YA M+ VYP+G+ AL +VLL+RK +L + + R + A R S LV AS F+W YT WWE+ EC RR+L+TG + FI PGT QA V MLMAF +L+A++ VRPHRD + QY+ GALI+Y ++ +ALL L+I++ QSQ +VGI+L+VLSV +I AA QT +G
Sbjct: 618 VYVLPLLDVNGQEGVL-------APTW---RSKVNFNGNYLRIPIIVVQLVAGFMSITGLQLAAPFEAFIRRLAVIPDFTFIFGCIFHANFYQKLLVVTLAPLLPVALLGCSWLWSLSRXXXXXXXXXXXXXXXXXAHARALRKHWTALLAFTFLVYGTTSSYIFQTFACASVEELDESYLRADYSIRCYDRRYWPYFAYAMAMILVYPVGVPALNAVLLYRKRRLNKEAELQAAFARANAAAARRAPAAKMPSQTSQVALPSSHATVSQLELERSNGGSEREQEYSGLVGASSFIWAPYTNAAEWWELVECARRVLLTGILVFIAPGTPGQAAVSMLMAFVALLAFMAVRPHRDHAMHQQYLLGALIVYFASTNALLLDLNISQSAQSQTVVGILLVVLSVVLIVAAAVQTVSG 1022
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835ZAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX5_9STRA) HSP 1 Score: 271 bits (694), Expect = 2.630e-83 Identity = 147/341 (43.11%), Postives = 212/341 (62.17%), Query Frame = 1
Query: 94 CRRQLRVTGHYLRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELD---------YLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKL-KMNNKGNSKIVRVASLAPR--SRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEP-QSQAIVGIVLIVLSVAMI 1077
C + + LR+PIVV QL+ G + +TGL + + I ++ D++ GC+ + +FY++LL MTL PL V+ LG SWL + R +LQ + A H E+LRRHWT FLA+TF ++ VSS VF TF C++++ YLRADYS+ CY YW Y AVM+ VYPIGI ALY+ +L RK ++ + + R A+ S + AS FLW+QYT+E WWE EC RR+L TGF+ FI+PGT QA V +L+ F +++++L V+P+R R ++QY GALI++LS+ +ALL K+D + + QSQ I+G +LIVLSV +I
Sbjct: 84 CNVHFKFNSNSLRIPIVVVQLIAGLVSITGLQLAPSFESFIHLLAILPDVSFAFGCIFDASFYERLLFMTLMPLVPVIFLGCSWLWSMRRVHRLQETADRAPALAAHAESLRRHWTLFLAWTFFIYSTVSSTVFQTFACDKIEEWSSRPYNWYLRADYSITCYDQLYWCNFAYTAVMVLVYPIGIPALYAYVLHRKRCADQLERQYSDMSARGANTGSNGESSFIVASSFLWDQYTDEAYWWEPVECARRVLFTGFLVFIMPGTAGQAAVSVLLTFVAVVSFLAVQPYRQRARHYQYFLGALIVFLSSFNALLLKVDASSDNGQSQVIIGALLIVLSVVLI 424
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A836CEM9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM9_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.870e-79 Identity = 167/429 (38.93%), Postives = 233/429 (54.31%), Query Frame = 1
Query: 7 VYLWPTYNVKCGKGVQQ---SLCRHHIPSWCLCRRQLRVTGHYLRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELDYL-----RADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLW--RKSKLKMN---------------------------------NKGNSKIVR------VASLAPRSR-----------------LVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQ 1095
+Y+ P Y V +G SL + P C + + +LR+PI+V QL+ GFM ++GL + + + + +S ++V GC+ + +FY +LL MTLAPL + LG SWL AC R QL+R++ AA +ALRRHWTAFLA+TFL+FG VSS +F F C+EL L RADY+VQCY YW Y YA ML VYPIGITALY+ LL+ R+S K++ N VR A L+ RS +V AS F+W+QY + WE+ EC RRL++TGF+ FI P + QA + AF L+ Y + +PH DR QYI GALI+Y +++SALL K+D + + SQ ++GIVL++L+VA+I AA+ Q
Sbjct: 113 LYVLPNYEVNGHRGALAAWGSLPQLSRPRPSCCSK---LRFRFLRIPIIVVQLVSGFMSISGLELAEPFQSFMMRLSILPSFSVVFGCIYDASFYTRLLFMTLAPLVPIAFLGCSWLFACARVGQLRRANAHAAAQCARSDALRRHWTAFLAWTFLIFGTVSSTIFQAFACDELPELGQWRLRADYAVQCYVDGYWGYFGYAMAMLVVYPIGITALYAYLLYLKRQSDRKLDVLAPVEAATGLRSTSNSAQPAGAAIAMYAGAQPNSATDLSVRSIQGSAAAQLSLRSATALGERQSAAVSQSPPGIVGASSFVWDQYHSKAQAWELVECARRLMLTGFLVFIHPQSAGQAAASTVFAFGFLLLYALYKPHHDRTLGHQYILGALIVYFASLSALLLKVDASADEGSQLVMGIVLVMLTVALIGAALLQ 538
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835ZA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA22_9STRA) HSP 1 Score: 249 bits (636), Expect = 3.170e-76 Identity = 139/298 (46.64%), Postives = 189/298 (63.42%), Query Frame = 1
Query: 151 QLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCE---ELD--YLRADYSVQCYTS-EYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVASLAPRSR--LVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKE 1020
QL+ GF+EVTGL + I ++ +L+ GCV FY++LL MTL PL V LLG SWL A R ++QR G +AA + +ALR+HWTAFLA TFLV+G VSS +F TF C+ ELD YLRADYS+QCY + EYW Y YA M VYP+G+ ALY++LL S+ + ++ +V + AP S LV AS FLW QY E WWEI EC RR+++TG + FILPG+ QA V +L AF + ++ VRP+R+ QY+ GA+I+Y ++M+ALL K ++ +
Sbjct: 10 QLVAGFLEVTGLQLAPAFENFIHKLATLLNLSFAWGCVYNATFYEQLLVMTLGPLVAVALLGCSWLWALVREHRVQRVAGADAARAVRLKALRKHWTAFLALTFLVYGTVSSTIFQTFACDYVQELDTYYLRADYSIQCYNNLEYWRYFAYAMTMFVVYPLGVPALYALLLC--SRRRQQHQAQQGLV---AAAPNSHWDLVHASSFLWAQYKPEAEWWEIVECARRVVLTGVLVFILPGSAGQAAVSVLFAFFLALMFMAVRPYREHTMQRQYLLGAVIVYFASMNALLIKSQVSDD 302
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835YTR7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTR7_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.600e-75 Identity = 132/281 (46.98%), Postives = 183/281 (65.12%), Query Frame = 1
Query: 274 NFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELD---------YLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRK---SKLKMNNKGNSKIVRVASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEP-QSQAIVGIVLIVLSVAMI 1077
+FY++LL MTL PL V+ LG SWL + R +LQ + A H ++LRRHWT FLA+TF ++G VSS VF TF C++++ YLRADYS+ CY YW YAAVM+ VYPIGI ALY+ +L RK +L+ +N S S + AS FLW+QYT+E WWE+ EC RR+L TGF+ FI+PGT QA V +L+ F +++++L V+P+R R ++QY GALI++LS+ +ALL K+D + + QSQ I+G +LIVLSV +I
Sbjct: 1 SFYERLLFMTLMPLVPVIFLGCSWLWSMRRVHRLQETADRAPALAAHAKSLRRHWTLFLAWTFFIYGTVSSTVFQTFACDKIEEWSSRPYNWYLRADYSITCYDQLYWCNFAYAAVMVLVYPIGIPALYAYVLHRKRCADQLERHNSDMSARGANTGSNGESSFIVASSFLWDQYTDEAYWWELVECARRVLFTGFLVFIMPGTAGQAAVSVLLTFVAVVSFLAVQPYRQRARHYQYFLGALIVFLSSFNALLLKVDASSDNGQSQVIIGALLIVLSVVLI 281
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Match: A0A835Z0D7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D7_9STRA) HSP 1 Score: 245 bits (625), Expect = 2.740e-75 Identity = 130/287 (45.30%), Postives = 189/287 (65.85%), Query Frame = 1
Query: 268 ELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELD---------YLRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVAS---LAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEP-QSQAIVGIVLIVLSVAMIAAAV 1089
+ +FYQ+LL MTL PL V+ LG SWL + R+++L + G A + H EALRRHWT FLA+T ++G VSS VF F C+E++ YLRADYS+ CY YW Y YAAVM+ VYPIGI ALY+ +L + + + + + + I A+ S + AS FLW+QYT++ WWE+ EC RR+L TGFV F++PGT QA V ML+AF + +++L V+PHR R ++QY G +I++LS+++ALL K++++ + QSQ ++G +L LSV ++ AAV
Sbjct: 1 DASFYQRLLFMTLMPLVPVIFLGCSWLWSTRRSKRLLETAGRAPALIAHVEALRRHWTLFLAWTLFIYGTVSSTVFQAFACDEIEEWSSHPYNWYLRADYSITCYDRRYWLYFAYAAVMVLVYPIGIPALYAHVL--RCRRRADQRQHCDIPDAAADTGNTSESDFLMASSFLWDQYTDDAHWWELVECARRVLFTGFVVFVMPGTAGQAAVSMLLAFVAAVSFLAVQPHRQRIMHYQYFLGVVIVFLSSVNALLLKVEVSSDDGQSQVVIGALLKALSVVLVCAAV 285 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171943 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14753 ID=mRNA_14753|Name=jgi.p|Trimin1|171943|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1239bp|location=Sequence derived from alignment at Contig_87:204363..207117- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGGTTTACCTGTGGCCAACCTACAACGTGAAGTGCGGGAAGGGCGTback to top protein sequence of jgi.p|Trimin1|171943 >Trimin1|171943|e_gw1.87.36.1 ID=Trimin1|171943|e_gw1.87.36.1|Name=jgi.p|Trimin1|171943|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=413bp MVVYLWPTYNVKCGKGVQQSLCRHHIPSWCLCRRQLRVTGHYLRLPIVVFback to top mRNA from alignment at Contig_87:204363..207117- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14753 ID=mRNA_14753|Name=jgi.p|Trimin1|171943|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2755bp|location=Sequence derived from alignment at Contig_87:204363..207117- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_87:204363..207117- >mRNA_14753 ID=mRNA_14753|Name=jgi.p|Trimin1|171943|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1239bp|location=Sequence derived from alignment at Contig_87:204363..207117- (Tribonema minus UTEX_B_3156 )back to top |