Trimin1|171815|e_gw1.85.67.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|171815
Unique NameTrimin1|171815|e_gw1.85.67.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length166
Homology
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835YK87_9STRA (Homeodomain-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK87_9STRA)

HSP 1 Score: 313 bits (802), Expect = 9.980e-108
Identity = 155/168 (92.26%), Postives = 159/168 (94.64%), Query Frame = 0
Query:    1 MQCNAAA--VKLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 166
            MQCNAAA  VKLASSRAPAQRWS EED RLTRAVE F+EKNWRRISAVVG+KKAVQCMQRW+RSLRPDLKKGRWTHEEDALLIELITQG KTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVF  +EDW IISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR
Sbjct:    1 MQCNAAAAGVKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835Z4C0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C0_9STRA)

HSP 1 Score: 280 bits (716), Expect = 8.830e-95
Identity = 133/156 (85.26%), Postives = 142/156 (91.03%), Query Frame = 0
Query:   11 ASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 166
            A  RAP +RWS EEDDRL R V+MF  +NWRRISAVVG+KKAVQCMQRWKRSLRPDLKKGRWT EEDALLIELITQG KTW ELSNRI GRSAKQCRERWTHHL+PAVNKDVFT +EDW I+STQAA+GNRWSHIAAMLPGRTENAVK+RWKTCHR
Sbjct:    2 APRRAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A836C964_9STRA (Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C964_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.330e-78
Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = 0
Query:   46 VVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQ--CRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 166
            +VG+KKAVQCMQRW+RSLRPDLKKGRWTHEEDALLIELITQG KTWPELSNRITGRSAKQ  CRERWTHHLDPAV+KD FTL+EDW I+STQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR
Sbjct:    1 LVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQIECRERWTHHLDPAVSKDSFTLEEDWLIVSTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 123          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835Z2Q0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.520e-56
Identity = 84/142 (59.15%), Postives = 107/142 (75.35%), Query Frame = 0
Query:   20 WSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRW 161
            W+ +ED+RL  AV  F  K+W R +A VG+K A QCMQRW+R+L+PD++KGRW  EEDALL++L+T+G  +W E +  I GRSAKQCRERW HHLDPAV++  FT  ED  +++ QAA GN W+ IAA LPGRTEN VK RW
Sbjct:    1 WNEDEDERLRCAVATFGGKSWPRAAAAVGTKTATQCMQRWRRALQPDMRKGRWRDEEDALLLDLMTRGHDSWSEFARHIPGRSAKQCRERWRHHLDPAVSRARFTPAEDAVVVAMQAARGNAWARIAARLPGRTENTVKTRW 142          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 9.760e-51
Identity = 87/158 (55.06%), Postives = 112/158 (70.89%), Query Frame = 0
Query:    9 KLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 166
            K AS+R   +RW   ED +LT AV+   EK+W+ I+  VGS+  VQC+QRWK+ LRP L KG+W  EEDA L++L T   K W  LS  ++GR++KQCRERW HHLDP++NK  +T +ED  II TQA +GNRWS IAA LPGRTEN++K+R K   R
Sbjct:  100 KKASTR--PRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQR 255          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.070e-48
Identity = 84/148 (56.76%), Postives = 107/148 (72.30%), Query Frame = 0
Query:   19 RWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 166
            RW  EED +LT AV+   EK+W+ I+  VGS+  VQC+QRWK+ LRP L KG+W  EEDA L++L T   K W  LS  ++GR++KQCRERW HHLDP++NK  +T +ED  II TQA +GNRWS IAA LPGRTEN++K+R K   R
Sbjct:  115 RWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQR 262          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.160e-48
Identity = 76/148 (51.35%), Postives = 108/148 (72.97%), Query Frame = 0
Query:   19 RWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 166
            +W+L ED+ L  AV  + E NW+ I+  VG++  VQC+QRWK+ L+P L KG+W+  EDA L++L+ +G K W +L+ ++ GR++KQCRERW+HHLDP+V K  +T +ED  I+  Q+ +GN+WS IA  LPGRTENAVK+RWK   R
Sbjct:   29 KWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR 176          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 163 bits (413), Expect = 1.620e-48
Identity = 75/150 (50.00%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   14 RAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 163
            +A  +RW+ EED++L  AV    E+NW+ I+  V  +   QC+QRW + L P L KG W  +ED LL EL+ +G K W +++ RI GR++KQCRERW +HLDP++ +  ++ +ED  I+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:    6 KAVPKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 155          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A8K1FB42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FB42_PYTOL)

HSP 1 Score: 171 bits (432), Expect = 2.840e-48
Identity = 79/156 (50.64%), Postives = 106/156 (67.95%), Query Frame = 0
Query:    8 VKLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 163
            VK A   A  +RW+ E+DD L  AVE F +KNW+ I+  V  +   QC+QRW + L+P L KG W HEED  L E++ QGC +W E++ +I GR+AKQCRERW +HLDP++N+  FT +ED  I      + NRW+ IA +LPGRTE+A+K RWKT
Sbjct:   29 VKTAEEGAAGKRWTPEQDDALRAAVEEFGQKNWKSIATRVPGRNHAQCLQRWNKVLKPGLVKGHWGHEEDLALQEMVLQGCHSWSEVAAQIPGRTAKQCRERWRNHLDPSINRAPFTPEEDNIIQQAYERLDNRWTQIAELLPGRTEDAIKARWKT 184          
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 164 bits (416), Expect = 5.230e-48
Identity = 77/150 (51.33%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   14 RAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 163
            +A  +RW+ EEDD+L  AV    E+NW+ I+  V  +   QC+QRW + L P L KG W  EED LL EL+ +G K W +++ RI GR++KQCRERW +HLDP++ +  ++ +ED  I+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:   79 KAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 228          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171815 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK87_9STRA9.980e-10892.26Homeodomain-like protein n=2 Tax=Tribonema minus T... [more]
A0A835Z4C0_9STRA8.830e-9585.26Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A836C964_9STRA2.330e-7891.06Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tr... [more]
A0A835Z2Q0_9STRA5.520e-5659.15Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
D8LM16_ECTSI9.760e-5155.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJU6_9PHAE1.070e-4856.76MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2UU49_9STRA1.160e-4851.35Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
H3G911_PHYRM1.620e-4850.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1FB42_PYTOL2.840e-4850.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0NJN5_PHYIT5.230e-4851.33Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 119..166
e-value: 0.015
score: 24.5
coord: 68..116
e-value: 1.4E-8
score: 44.5
coord: 16..65
e-value: 1.6E-11
score: 54.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 12..63
score: 8.699096
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 115..165
score: 7.630754
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 64..114
score: 11.358335
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 19..63
e-value: 2.08577E-9
score: 48.7258
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 140..163
e-value: 4.14971E-4
score: 34.4734
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 71..114
e-value: 4.24038E-8
score: 45.259
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 20..72
e-value: 2.3E-11
score: 43.7
NoneNo IPR availableGENE3D1.10.10.60coord: 18..67
e-value: 1.2E-14
score: 56.0
NoneNo IPR availableGENE3D1.10.10.60coord: 68..120
e-value: 4.0E-17
score: 63.9
NoneNo IPR availableGENE3D1.10.10.60coord: 122..164
e-value: 8.2E-13
score: 50.1
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 15..83
coord: 68..163
NoneNo IPR availablePANTHERPTHR45614:SF152SUBFAMILY NOT NAMEDcoord: 15..83
coord: 68..163
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 122..163
e-value: 7.3E-8
score: 32.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 18..63
score: 11.207087
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 119..166
score: 13.674319
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 64..118
score: 19.824524
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 66..161
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 19..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_85contigContig_85:422414..426973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171815mRNA_12204Tribonema minus UTEX_B_3156 mRNAContig_85 422414..426973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|171815|e_gw1.85.67.1 ID=Trimin1|171815|e_gw1.85.67.1|Name=jgi.p|Trimin1|171815|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=166bp
MQCNAAAVKLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSK
KAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITG
RSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLP
GRTENAVKVRWKTCHR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf