mRNA_12204 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|171815
Unique Name	mRNA_12204
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835YK87_9STRA (Homeodomain-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK87_9STRA)

HSP 1 Score: 313 bits (802), Expect = 9.980e-108
Identity = 155/168 (92.26%), Postives = 159/168 (94.64%), Query Frame = 1

Query:    1 MQCNAAA--VKLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 498
            MQCNAAA  VKLASSRAPAQRWS EED RLTRAVE F+EKNWRRISAVVG+KKAVQCMQRW+RSLRPDLKKGRWTHEEDALLIELITQG KTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVF  +EDW IISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR
Sbjct:    1 MQCNAAAAGVKLASSRAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835Z4C0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C0_9STRA)

HSP 1 Score: 280 bits (716), Expect = 8.830e-95
Identity = 133/156 (85.26%), Postives = 142/156 (91.03%), Query Frame = 1

Query:   31 ASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 498
            A  RAP +RWS EEDDRL R V+MF  +NWRRISAVVG+KKAVQCMQRWKRSLRPDLKKGRWT EEDALLIELITQG KTW ELSNRI GRSAKQCRERWTHHL+PAVNKDVFT +EDW I+STQAA+GNRWSHIAAMLPGRTENAVK+RWKTCHR
Sbjct:    2 APRRAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A836C964_9STRA (Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C964_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.330e-78
Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = 1

Query:  136 VVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQ--CRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 498
            +VG+KKAVQCMQRW+RSLRPDLKKGRWTHEEDALLIELITQG KTWPELSNRITGRSAKQ  CRERWTHHLDPAV+KD FTL+EDW I+STQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR
Sbjct:    1 LVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQIECRERWTHHLDPAVSKDSFTLEEDWLIVSTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 123

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835Z2Q0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.520e-56
Identity = 84/142 (59.15%), Postives = 107/142 (75.35%), Query Frame = 1

Query:   58 WSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRW 483
            W+ +ED+RL  AV  F  K+W R +A VG+K A QCMQRW+R+L+PD++KGRW  EEDALL++L+T+G  +W E +  I GRSAKQCRERW HHLDPAV++  FT  ED  +++ QAA GN W+ IAA LPGRTEN VK RW
Sbjct:    1 WNEDEDERLRCAVATFGGKSWPRAAAAVGTKTATQCMQRWRRALQPDMRKGRWRDEEDALLLDLMTRGHDSWSEFARHIPGRSAKQCRERWRHHLDPAVSRARFTPAEDAVVVAMQAARGNAWARIAARLPGRTENTVKTRW 142

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 9.760e-51
Identity = 87/158 (55.06%), Postives = 112/158 (70.89%), Query Frame = 1

Query:   25 KLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 498
            K AS+R   +RW   ED +LT AV+   EK+W+ I+  VGS+  VQC+QRWK+ LRP L KG+W  EEDA L++L T   K W  LS  ++GR++KQCRERW HHLDP++NK  +T +ED  II TQA +GNRWS IAA LPGRTEN++K+R K   R
Sbjct:  100 KKASTR--PRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQR 255

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.070e-48
Identity = 84/148 (56.76%), Postives = 107/148 (72.30%), Query Frame = 1

Query:   55 RWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 498
            RW  EED +LT AV+   EK+W+ I+  VGS+  VQC+QRWK+ LRP L KG+W  EEDA L++L T   K W  LS  ++GR++KQCRERW HHLDP++NK  +T +ED  II TQA +GNRWS IAA LPGRTEN++K+R K   R
Sbjct:  115 RWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQR 262

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.160e-48
Identity = 76/148 (51.35%), Postives = 108/148 (72.97%), Query Frame = 1

Query:   55 RWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 498
            +W+L ED+ L  AV  + E NW+ I+  VG++  VQC+QRWK+ L+P L KG+W+  EDA L++L+ +G K W +L+ ++ GR++KQCRERW+HHLDP+V K  +T +ED  I+  Q+ +GN+WS IA  LPGRTENAVK+RWK   R
Sbjct:   29 KWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR 176

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 163 bits (413), Expect = 1.620e-48
Identity = 75/150 (50.00%), Postives = 106/150 (70.67%), Query Frame = 1

Query:   40 RAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 489
            +A  +RW+ EED++L  AV    E+NW+ I+  V  +   QC+QRW + L P L KG W  +ED LL EL+ +G K W +++ RI GR++KQCRERW +HLDP++ +  ++ +ED  I+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:    6 KAVPKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 155

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A8K1FB42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FB42_PYTOL)

HSP 1 Score: 171 bits (432), Expect = 2.840e-48
Identity = 79/156 (50.64%), Postives = 106/156 (67.95%), Query Frame = 1

Query:   22 VKLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 489
            VK A   A  +RW+ E+DD L  AVE F +KNW+ I+  V  +   QC+QRW + L+P L KG W HEED  L E++ QGC +W E++ +I GR+AKQCRERW +HLDP++N+  FT +ED  I      + NRW+ IA +LPGRTE+A+K RWKT
Sbjct:   29 VKTAEEGAAGKRWTPEQDDALRAAVEEFGQKNWKSIATRVPGRNHAQCLQRWNKVLKPGLVKGHWGHEEDLALQEMVLQGCHSWSEVAAQIPGRTAKQCRERWRNHLDPSINRAPFTPEEDNIIQQAYERLDNRWTQIAELLPGRTEDAIKARWKT 184

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 164 bits (416), Expect = 5.230e-48
Identity = 77/150 (51.33%), Postives = 106/150 (70.67%), Query Frame = 1

Query:   40 RAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSKKAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKT 489
            +A  +RW+ EEDD+L  AV    E+NW+ I+  V  +   QC+QRW + L P L KG W  EED LL EL+ +G K W +++ RI GR++KQCRERW +HLDP++ +  ++ +ED  I+  QA +GNRWS IAAMLPGRTE+AVK+RWK+
Sbjct:   79 KAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 228

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A836C8N2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N2_9STRA)

HSP 1 Score: 655 bits (1690), Expect = 4.780e-238
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1

Query:    1 MAGGTKLGRHKQLRKLDNLAAATTLRAVPAKTPGPCIFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDGMLMRSPWHTASDDLYHRVNEHGNMASWSRLVLVAKPIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRACGHRYYATCLQRWQESSIGATCTACRTELHGVGAAA 954
            MAGGTKLGRHKQLRKLDNLAAATTLRAVPAKTPGPCIFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDGMLMRSPWHTASDDLYHRVNEHGNMASWSRLVLVAKPIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRACGHRYYATCLQRWQESSIGATCTACRTELHGVGAAA
Sbjct:    1 MAGGTKLGRHKQLRKLDNLAAATTLRAVPAKTPGPCIFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDGMLMRSPWHTASDDLYHRVNEHGNMASWSRLVLVAKPIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRACGHRYYATCLQRWQESSIGATCTACRTELHGVGAAA 318

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A836CAN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN6_9STRA)

HSP 1 Score: 361 bits (926), Expect = 5.750e-122
Identity = 181/302 (59.93%), Postives = 224/302 (74.17%), Query Frame = 1

Query:   70 TLRAVPAKTPGPCIFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVP--VDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGRS-MPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDGMLMRSPWHTASDDLYHRVNEHGNMASWSRLVLVAKPIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRACGHRYYATCLQRWQESSIG----ATCTACRTELHGVGAAA 954
            TL+AVPA   G  IFVK+LSG T TVHGLS SDTV ++ EA+E KEGV    D+Q+L FAG++L+   TL +  I + ST+HM+  L GG S +  LKIPFADVS++ A+Q + F PDAP WRT   GLN+EGYCRN  C ARN+LVI+ +GM+AFTLG++CACP+C + + P TCGFYACTW YEGAKTDG+ M SPW+TA D  Y  VNEHGNMA WSRLVLVAKPIAS A+DKD  A+P++C +CLM LA +E+T  R CGHRY+ATCL RWQ+   G    +TC ACR + HG  A+A
Sbjct:    2 TLQAVPADEHGINIFVKSLSGKTFTVHGLSCSDTVDTIMEAVEDKEGVLNLFDEQRLVFAGQQLETGRTLYEHRIQNDSTLHMMGRLRGGSSSLAPLKIPFADVSKTSAIQHIRFSPDAPSWRTVVTGLNLEGYCRNPRCAARNELVIANVGMDAFTLGARCACPQCSSAILPHTCGFYACTWKYEGAKTDGVFMCSPWYTAGDTAYDLVNEHGNMALWSRLVLVAKPIASGAKDKDGRAVPNDCGLCLMSLAESENTAVRNCGHRYHATCLTRWQQQYSGGSHRSTCPACRAQHHGASASA 303

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835ZEG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG5_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.530e-88
Identity = 161/324 (49.69%), Postives = 198/324 (61.11%), Query Frame = 1

Query:   10 GTKLGRHKQLRKLDNLAAATTLRAVPAKTPGP----CIFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDGMLMRSPWHTASDDLYHRVNEHGNMASWSRLVLVAKP---IASDAQDKDKDAL----------PSECAVCLMPLAAAEHTVTRA-CGHRYYATCLQRWQESSIGATCTACRT 927
            G +L R+  L  L +LA A TL+A  A  PGP     I+VKTL G ++ + G+   DTV  L++ I   EG+P DQQ+L FAGK+L+ S T+ D+ +   ST+H+VL L GG   P   + FADVS   A++R SF  DAP WRT   GLNMEGYCR+  CKAR  LVI+ IGM AF LGS+C CP CG+ +TPVTCGF AC W Y+GAK DG L+R  W TA DD Y R  E  NMA+WSRLVLVAKP   + SD      DA+          P ECAV L         VT   CGHRY+A CL  W+E S  A+C+ C T
Sbjct:  121 GERLIRYWPLATLPSLACAMTLQAPAA--PGPQGSRAIYVKTLRGQSLPLSGVLPCDTVDILKDRISDCEGIPADQQRLIFAGKQLEDSRTVDDYSMERDSTLHLVLRLRGGGCGPS-SLQFADVSNDGAIERRSFSQDAPRWRTVRRGLNMEGYCRDARCKARGALVIAPIGMAAFPLGSRCTCPMCGSAITPVTCGFNACAWTYDGAKEDGELVRGAWRTAGDDKYERFRESDNMATWSRLVLVAKPAVKVKSDPGAAVADAVDNKEAAGASEPDECAVGLRGFGGRSGAVTTTRCGHRYHALCLAGWRECSH-ASCSKCPT 440

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835ZBQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ4_9STRA)

HSP 1 Score: 270 bits (690), Expect = 6.650e-85
Identity = 147/322 (45.65%), Postives = 197/322 (61.18%), Query Frame = 1

Query:   10 GTKLGRHKQLRKLDNLAAATTLRAVPAKTPGPCIFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDGMLMRSPWHTASDDLYHRVNEHGNMASWSRLVLVAKPI----------ASDAQDKDKDA---LPSECAVCLMPLAAAEHT---VTRACGHRYYATCLQRWQESSIGATCTACRT 927
            G +L + +QLR L  L+ A TL+AVPA+     +FVKTL+G+   +  +   DT+ +L+E I+  EG+  DQQ++ FAG++L+   ++ D+ I    T+H+VL L GG   P   + FADV+   AM+R S   DAP WRT   G+NMEGYCRN  C+AR  LVI+ +GM AF LGS C CP C + +TPVTCGFYAC W Y+GAK  G L+R  W TA DD Y R  E  NM +WSRLVLVAKP           A+++   DK A    P ECAVCL    + + +    +  CG+RY+A CL  W+E S  A+C+ C T
Sbjct:   76 GKRLTKKRQLRALPGLSCAMTLQAVPAQGVSMKLFVKTLTGACFELDDVLSGDTIDALKEMIQDLEGILPDQQRIIFAGRQLEDGRSVADYSIQKEHTLHLVLRLRGGGCGPS-GLQFADVTNDGAMERRSVSDDAPVWRTVRRGINMEGYCRNLRCEARVTLVIAPVGMAAFPLGSLCPCPVCYSAITPVTCGFYACAWTYDGAKEGGELVRGAWRTAGDDKYDRFRESDNMTTWSRLVLVAKPAVKVKPKPRATAAESSGADKAAGRLQPDECAVCLRGFGSGDGSSKATSTPCGYRYHALCLASWRECSH-ASCSKCPT 395

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835YTW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW7_9STRA)

HSP 1 Score: 202 bits (514), Expect = 8.170e-58
Identity = 119/297 (40.07%), Postives = 165/297 (55.56%), Query Frame = 1

Query:  109 IFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIG-----SGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDGMLMRSPWHTASDDLYHRVN------EHGNMASWSRLVLVAK------PIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRA---CGHRYYATCLQRWQESSIGA--TCTACRTEL 933
            ++VKTL+G  I +  +    TV  L++ I   EG+P DQQ+L + GK L+ S T+ D+G+         +V ++L L GG S+   +  FADV+ ++A+ R++F  +AP WR AC GLN+EG C    C+AR ++VI  +GM AFTLG  CACP C     PVTC F AC WM+EG K  G +       A+ D Y R N        G+M  W RLVLVAK      P A+ A      A   +CAVCL PL +   ++  A   CGH Y+  CL+ W+ SS  +  TC +C  +L
Sbjct:  140 VYVKTLTGKVIALAAVVADTTVDKLKQMIHDTEGIPPDQQRLIWRGKALEDSRTVSDYGMKFCPELREPSVQILLRLRGGGSVTSGR--FADVADANAISRMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGEMVIHGVGMGAFTLGDACACPLCRRPFAPVTCAFLACAWMFEGVKAGGGVALGGVWRAAGDAYERFNTGADGESGGSMVEWERLVLVAKCRGRVRPAAALASGSS--AQVDDCAVCLEPLCSWNVSLQAAVTPCGHVYHEACLKAWRRSSSTSRGTCASCCADL 432

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835Z319_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z319_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.520e-53
Identity = 119/311 (38.26%), Postives = 164/311 (52.73%), Query Frame = 1

Query:  109 IFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIG-----SGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDG-MLMRSPWHTASDDLYHRVN------EHGNMASWSRLVLVAK-------PIASDAQ-----DKDKDALPS-------ECAVCLMPLAAAEHTVTRA---CGHRYYATCLQRWQESSIGA--TCTACRTEL 933
            ++VKTL+G T+ +  +    TV  L++  +  + +P DQQ+L + GK L+ S T+ D+G+         T+ + L L GG  +   +  FADV+  +A+  ++F  +AP WR AC GLN+EG C    C+AR K+VI  +GM AFTLG  CACP C     PVTC F+AC WM+EG K  G   +   W  A D  Y R N        G+M  W RLVLVAK       P A  A       +   AL S       +CAVCL PL +   ++  A   CGH Y+  CL+ W+ SS  +  TC +CR  L
Sbjct:  165 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGR--FADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGD-AYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 472

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A835YSA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.250e-50
Identity = 105/277 (37.91%), Postives = 145/277 (52.35%), Query Frame = 1

Query:  172 VASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGS------TVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDG-MLMRSPWHTASDDLYHRVN------EHGNMASWSRLVLVAK------PIASDAQDKDKDALP-SECAVCLMPLAAAEHTVTRA-CGHRYYATCLQRWQESSIGAT--CTACRTEL 933
            V  +++ I+  EG P +QQ+L ++GK L+ S +L    +  G       T+ ++  L GG S  L    FADV+ ++ + R++F   AP+WR ACEGLN+EG C N  C A  ++VI  IGM AF LG  CACP C A + P+TC F+ C WM+EG K DG   + + W  A D  Y R N        G M  W R +L+AK        A+D +D   +     +CAVCL PL        +  CGH Y+  CL  WQ  S   +  C  CR +L
Sbjct:    6 VHEVKQTIQRTEGFPPEQQRLIWSGKELKDSRSLRQHFMFPGPDNIHPPTLQLIPRLRGGGS--LSGGMFADVADANGISRIAFSETAPEWRIACEGLNIEGLCSNAECAAHGQMVIHKIGMGAFALGGACACPLCVAPIVPLTCAFHRCVWMFEGVKADGGASLSTAWREAGDS-YERFNTGTEGTSSGAMVEWERFMLIAKGRKFTCARAADTEDASSNGTQLDDCAVCLEPLRTRRAPFVKTPCGHLYHKACLTAWQRCSSAGSGRCPMCRADL 279

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A225VBF3_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VBF3_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.030e-46
Identity = 96/289 (33.22%), Postives = 149/289 (51.56%), Query Frame = 1

Query:  109 IFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTL--GSQCACPECGADVTPVTCGFYACTWMYEGAKT-DGMLMRSPWHTASDDLYHR--VNEHGNMASWSRLVLVAKPIASDAQDKDKDALPSE-------CAVCLMPLAA-AEHTVTRACGHRYYATCLQRWQESSI----GATCTACR 924
            +FVK ++G T ++  +S +DTV  ++  +E K G+  + Q L++ GK+L+   TL  + + +  T+ +   + GG S P+ +  FADVS    + R++F  DAP+WR  CEGLN+EG CRNR C+A  K+VI+      F L       CP C   V P+TCG + C+W YEG K  D + + S W  A   +Y+R   +E      W+ L++V KPIA     K   +  S        C++C  P  +  +   T  CGH ++  C   W ++        +C  CR
Sbjct:   42 VFVKMITGKTASIECMS-TDTVGYVKSRVEKKYGISTNDQCLTYGGKQLRDHFTLTTYNVNNMKTLLLSTKMLGGFSGPVSRT-FADVSDGSLITRINFSDDAPEWRLCCEGLNIEGRCRNRMCRAYRKMVIATKDFEMFNLIRDDNVRCPMCQHKVKPLTCGLHDCSWRYEGVKNADKLSVCSQWQEAKGYVYYRFAADEKNGTVEWASLLMVVKPIADSVSAKLTSSTTSVHVSTDDVCSICWSPFGSPVKRPTTSLCGHNFHQVCSDEWAKACAYNHTQPSCPICR 328

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A3M6V6M3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6M3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.260e-46
Identity = 103/311 (33.12%), Postives = 152/311 (48.87%), Query Frame = 1

Query:   55 LAAATTLRAVPAKTPGPCIFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGGR--SMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTL--GSQCACPECGADVTPVTCGFYACTWMYEGAK-TDGMLMRSPWHTASDDLYHRVN--EHGNMASWSRLVLVAKP----------IASDAQDKDKDALPSECAVCLMPLAAAEHTVTRACGHRYYATCLQRW----QESSIGATCTACR 924
            L A   +R          +FV TLSG TIT++ LS +DTV  ++  IE KE +  + Q+L +AGK L     L  + I  G+T+H+ L + GG     P+ +  F DVS +  +    F PDAP+WR   +GLN+EG CRNR C+A   ++I       F L       CP C  +V P+TCGFY C W +EG   ++ + + S W+ AS D+YHR +  E      W+ L+++ KP          +      K  D     C +C  PL++     T  CGH ++  C + W    +      +C  CR
Sbjct:   60 LVATAQVRVKGRHATAMTVFVITLSGKTITINCLS-TDTVNYVKMKIEDKESIAPEVQRLVYAGKLLNDQVMLSSYNIKGGNTLHLSLRIRGGSIGHSPVFRT-FVDVSNNSLITARKFSPDAPEWRLVSKGLNIEGRCRNRECRAYRSMIIDRKEFVPFNLMRDDDIECPICHCEVRPITCGFYGCAWRFEGVTGSENLSICSQWNDASGDMYHRFDPDEVNGSVEWASLLILTKPRQEMIAAQLCLTVPTTFKSSDT----CTICWSPLSSPTKCFTPHCGHTFHRECSKEWAKWCKHRKTQPSCPICR 364

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Match: A0A485LQL2_9STRA (Aste57867_24224 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQL2_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.240e-46
Identity = 103/292 (35.27%), Postives = 146/292 (50.00%), Query Frame = 1

Query:  109 IFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGSGSTVHMVLSLCGG-----RSMPLLKIP-----FADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTL-GSQCACPECGADVTPVTCGFYACTWMYEGAKTDGML-MRSPWHTASDDLYHRVNE-HGNMASWSRLVLVAKPIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRACGHRYYATCLQRW----QESSIGATCTACRTEL 933
            +FVKT+SG TI++H   H  ++  ++  IE KEG PV  Q+L + G  L  S  + D+ I + +T+H +  L GG     +  P  K+P     FADVS +  +  + F  DAP WRT   GLN+EG C N  C A  +LV + +G  +F +  S  +CP C   V P +CGFY C W YEG K    L + S W  A  D+YH       ++  W+ LV+ A+ +            PSECAVC  PL  +       C H  +  CL  W    + +   ATC  CR+ +
Sbjct:  110 VFVKTISGRTISLHVAPHR-SIRHVKVQIEDKEGTPVAMQRLVYRGVELTDSRFVEDYNIPANATLHGLARLAGGSLISSQPKPAPKLPTNGVAFADVSNAAMLDVIHFSSDAPKWRTVNFGLNVEGRCDNSGCVAYFQLVYTPLGFRSFNVVASVASCPMCHEAVVPKSCGFYKCRWRYEGVKVHTDLHLSSGWALAEGDVYHAFKAVDSDLVRWASLVVTAQQLQP----------PSECAVCFEPLGRSPSLAKLGCKHSIHQACLNEWTAMCRSNHKQATCPLCRSTI 390

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|171815 vs. uniprot
BLAST of jgi.p|Trimin1|171815 vs. uniprot

BLAST of jgi.p|Trimin1|171815 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YK87_9STRA	9.980e-108	92.26	Homeodomain-like protein n=2 Tax=Tribonema minus T...	[more]
A0A835Z4C0_9STRA	8.830e-95	85.26	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
A0A836C964_9STRA	2.330e-78	91.06	Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tr...	[more]
A0A835Z2Q0_9STRA	5.520e-56	59.15	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
D8LM16_ECTSI	9.760e-51	55.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KJU6_9PHAE	1.070e-48	56.76	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A7S2UU49_9STRA	1.160e-48	51.35	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
H3G911_PHYRM	1.620e-48	50.00	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A8K1FB42_PYTOL	2.840e-48	50.64	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
D0NJN5_PHYIT	5.230e-48	51.33	Myb-like DNA-binding protein, putative n=2 Tax=Phy...	[more]

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BLAST of jgi.p|Trimin1|171815 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C8N2_9STRA	4.780e-238	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAN6_9STRA	5.750e-122	59.93	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZEG5_9STRA	1.530e-88	49.69	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZBQ4_9STRA	6.650e-85	45.65	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTW7_9STRA	8.170e-58	40.07	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z319_9STRA	1.520e-53	38.26	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YSA3_9STRA	1.250e-50	37.91	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A225VBF3_9STRA	1.030e-46	33.22	Ubiquitin family protein n=1 Tax=Phytophthora mega...	[more]
A0A3M6V6M3_9STRA	1.260e-46	33.12	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]
A0A485LQL2_9STRA	4.240e-46	35.27	Aste57867_24224 protein n=1 Tax=Aphanomyces stella...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_85	contig	Contig_85:422414..426973 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|171815\|e_gw1.85.67.1
BRITE	ko00000,ko00001,ko03000
KEGG Pathway	ko04151,ko05166,map04151,map05166
KEGG ko	ko:K09420,ko:K09422
Preferred name	MYBL2
Description	RNA polymerase II transcription regulator recruiting activity
COG category	ADK
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5147@1\|root,KOG0048@2759\|Eukaryota
Evalue	1.6e-51
Seed ortholog	2880.D8LM16
Hectar predicted targeting category	other localisation
TranscriptId	172137
Track	FilteredModels1
ProteinId	171815

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|171815	gene_12204	Tribonema minus UTEX_B_3156	gene	Contig_85 422414..426973 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12204_1	exon_12204_1	Tribonema minus UTEX_B_3156	exon	Contig_85 422414..422620 +
exon_12204_2	exon_12204_2	Tribonema minus UTEX_B_3156	exon	Contig_85 422893..423120 +
exon_12204_3	exon_12204_3	Tribonema minus UTEX_B_3156	exon	Contig_85 426911..426973 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12204	CDS_12204	Tribonema minus UTEX_B_3156	CDS	Contig_85 422414..422620 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|171815	Trimin1\|171815\|e_gw1.85.67.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_85 422414..426973 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_85:422414..426973+
coding sequence from alignment at Contig_85:422414..426973+

spliced messenger RNA

>mRNA_12204 ID=mRNA_12204|Name=jgi.p|Trimin1|171815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=498bp|location=Sequence derived from alignment at Contig_85:422414..426973+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGTGCAATGCCGCTGCTGTGAAGTTGGCGAGCAGTCGGGCTCCTGC
ACAGCGTTGGAGTCTAGAGGAGGACGACAGACTCACGCGTGCCGTCGAGA
TGTTCGAGGAGAAGAACTGGCGTCGCATCAGCGCCGTGGTGGGGAGCAAG
AAAGCCGTGCAATGCATGCAGAGATGGAAGCGATCGTTGCGTCCTGACTT
GAAAAAGGGACGCTGGACGCACGAGGAGGATGCTCTATTGATTGAACTGA
TTACCCAAGGGTGCAAGACATGGCCCGAGCTCTCCAATAGGATCACTGGG
CGGAGTGCGAAGCAATGCAGAGAGAGGTGGACGCACCATTTGGACCCTGC
CGTCAACAAGGATGTTTTCACACTGAAGGAAGACTGGTTCATCATTTCCA
CCCAGGCCGCCGTTGGGAACCGCTGGAGCCACATTGCTGCGATGCTGCCG
GGCCGAACTGAAAACGCCGTCAAAGTCAGATGGAAAACGTGCCACAGG

protein sequence of jgi.p|Trimin1|171815

>Trimin1|171815|e_gw1.85.67.1 ID=Trimin1|171815|e_gw1.85.67.1|Name=jgi.p|Trimin1|171815|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=166bp
MQCNAAAVKLASSRAPAQRWSLEEDDRLTRAVEMFEEKNWRRISAVVGSK
KAVQCMQRWKRSLRPDLKKGRWTHEEDALLIELITQGCKTWPELSNRITG
RSAKQCRERWTHHLDPAVNKDVFTLKEDWFIISTQAAVGNRWSHIAAMLP
GRTENAVKVRWKTCHR

mRNA from alignment at Contig_85:422414..426973+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12204 ID=mRNA_12204|Name=jgi.p|Trimin1|171815|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4560bp|location=Sequence derived from alignment at Contig_85:422414..426973+ (Tribonema minus UTEX_B_3156 )
ATGCAGTGCAATGCCGCTGCTGTGAAGTTGGCGAGCAGTCGGGCTCCTGC
ACAGCGTTGGAGTCTAGAGGAGGACGACAGACTCACGCGTGCCGTCGAGA
TGTTCGAGGAGAAGAACTGGCGTCGCATCAGCGCCGTGGTGGGGAGCAAG
AAAGCCGTGCAATGCATGCAGAGATGGAAGCGATCGTTGCGTCCTGACTT
GAAAAAGGTGAGGCGGCGATTATCCTAGCGCGAGGTAACGCCTGCTGCGC
TGCAGAGTGTGCTTGCCAGTGCAGAAGTTGGTATTCCAGCGGTTCTGATA
ATTGTAAGCAAATAACTTGAATGGTGCAGCATCATCATAATGCTGTCCAC
TGTATCGTATACTTGACCTCCCGACTTTCTAATACTATTTCCACTACATA
CATACTGTCCTTGCATAAGACTGTCTGTATTCAATTACTGCCAACCCCTC
ACTTACGTCCACCCGTCCTTGCACACCAGGGACGCTGGACGCACGAGGAG
GATGCTCTATTGATTGAACTGATTACCCAAGGGTGCAAGACATGGCCCGA
GCTCTCCAATAGGATCACTGGGCGGAGTGCGAAGCAATGCAGAGAGAGGT
GGACGCACCATTTGGACCCTGCCGTCAACAAGGATGTTTTCACACTGAAG
GAAGACTGGTTCATCATTTCCACCCAGGCCGCCGTTGGGAACCGCTGGAG
CCACATTGTGAGTCTCAATCTGTGAGTCTATGTAGAGCTGAGACTGATAG
TCTACCGGATCATGTCGCTATCCTTAAAAGCTGGCGGCCCGGGGGCACCT
AATTCAAATGATATTTGGCCCCAAATCTATCTAAGCTGGGTAATATATTT
GCCGGATTCAATATAAGCTGACCCCCGTGTTTGCTACATAGTCTGCATGT
GAGGTATGTAGCTGCTGGCACTGCACGCTGAACTGTTGCTGTTCTTGCAC
TGCACGTCGGCGAGTGGCAGACTCTGAGTGTGATCACATGTGACTCTGAG
GGTGCCCTCTGAATAACTGTCACAGTCACGGTGATGCAGCACTGCCATGC
TCATCATGATCCAACCTCTGCGGCCCTTCTGAGGCTGCCTCACCTTTGTG
CATGAAGCCATTGGTGTCAGGCTGGTTTTCATAGGCCCAGAAACTGGCCT
CCAGAAACAGCCATTCTTGAAGTGCGTTTTCTGGTTTTCAATTTCCGCAG
CCAGTTTTCAAGCGCTCTTTCACAGCGTGCGCATCAGAAAACCGCGGCCT
AACCCTAACCCTAAGCGGCGGATTCCAAAGATTAGAGGCCTGAAGATGGT
TGCAGGAGCTAGCGGCACGCAAGCCTGACCCGCGTGGCTGTAAACACGGG
ACACACTGATACCATCATGGAGTTTGGCTTGGCCAGCAGCGGCGCTCTAA
CTCATTGCCTGGCGTGTGTTGCACCAACCACAGACCCCACGACAGCTACT
GCACGCAGCAGAGAGCGCTGGAAGTGCGCTGTTCGTTGGCATATGCCACT
ATAAATAGTCAAACTACACCACTGCACACGCCGCCGCGCCCTCCAACGCC
CGTTAACAGCCGAGTACACCGCGCCAGGCTCGGTTTTTCGTTTTTCCAGC
CCTCCGCGGAGAACCGCGCAGAACCGAGAATTGATGTCCATTTTCAGGTC
TTCGAGGCATTCCGAAACATAAATTGGCCGAAAACGGTCAGAACAGCTCC
TATGAAAGAGGTATCCGAAAAATGGGCGCAACGCTTGGGGTTGAAGGGGT
TTCCAGGCATCGTTTTCGGCCTCTATGAAAACTAGCCTCACGCGCGAAAA
CTGAACATTGACTTCAAGTTAAACTAAAAAACCGCCGTGGTGCGCTAGCA
AGCACCAATCGTATGGGTTGTGTAAGGGTGTCTCATAAAGGCCAAATTCA
TTTAAGCCTGTGAATACAACGGCTTGCTTCAATTTGCTTGTCGGATGTTA
CGTATACAAACGCCTGACAGTGTTATAATCAGGTGCCCCGCCGGCTTAAA
TAATGACATGACGGTACATTCAAGTCATCATGACGTTGCGGCAGTTAAAT
GAACTATAATCTGTTCATCAAACGCTGGTTCCGCACAACCGTAGCGTCAT
GAAGATTGTATCATTTTTGACAGATAGAAAATCAAGCGTGCAGTCTAGCA
CGTCACACCATACCAATGAATAGCGCAGAGGCAAACGGAGGCAGTTAAAG
GTGACGCACACTTGAAGCAACTTCAATTATTGGTAAAAGCCGGCTCCGAG
TCCGAGTCGGAAATCAAGGAAGTGATTTTATTATCCACAGCAGCCGTTGA
AGCTGCGCGTGCCCGCTGAGGAATGTTGAGTGACTGTCACCGGAACCAAT
GATGTGGAGCTGATCTCGAACACCTCGCACAACTTGATTACAACTACAAT
CTCAGGTGGCTCACTGGCAGGATATCCTCAACTAGGTCATTTTACCCTTA
GGCTAGTTGCGCATCATGATGAGACTATGCATTCAATAATTTACACTGCT
AAAGAGCCTCTCCCAGTGCAACAGCTGCGGAGGACGAAACTATGATAACC
GGTTTGAGGGGACAATCGTTGTGACCGCAGTAGCCGGAGGAACAGTGCTC
TCGCAAGCCAATCATCATCGAACAATTGAATATCATGCTCGAGCGGCTCT
TCTGGAACTCGCCCCCCCCCCCTTTTGACTTGAAGCTCAGCTGATTTGAT
TAAGCAGTTGAGCACTTGACAATGTGCGCTGCACTGCTTCGGGTCCCCCC
TTCTGTGCAAAAAGGATGGATCTATCAGTGAGTTTGCTGCACCGCAAACT
TGAAGGAGCCCCTCTGCTTTTGCAACTTGAATTTGAAAGCATAAGGCAGA
GGCTCAGCTTATTAAGCGGTACGGCACTGCTGCTGACCCCGGGGGCCCTC
TTCTTACTATTAGTTAGTAACTAGTAGGTAACCGTTACCAGAACAGTTAC
TCCCGACACTGCTGATGCCGCTTGCCGATTACAACCTGCAATGGCAATAG
GATTGAATTGTGAATAATGGGACCCCAACTGGGAAAACGGGACCCAGCAT
CAAACCACTTTCAAGTTGGCGAAGTCTCAGACAGGTTGTCAATCAACCCT
GCCAGCGTTTGCTGCTCAATATGAACATGATGTTGGGTTGTTAGGTGAAG
TGATCAGTGTTGAAGTTGGTTAGGATTCCGTGATGAGCACTGAGCACTCT
AAACACCTCAATTTTAGTTGAACTTCCCTAAGCCGAAGGTCTCAGTTGAG
GTTAATGTTCAGGTTAAGTTCAACATGGTATATCTCAAGATCCTGAGCGA
GGCTCAGCGCAGAAAAAAATTGCGAAATTACTTATTTGTGACGATGATCA
TTACACTAACATGATCACATTACGGAAAGAGCAATTCCAGAGTTCACCCC
TGTGGGTCCCGTGTTGACTTCTGGTCCCATTTTTTTTCTTCGCAATTTAC
TAACTTGAACCCTCAATCTCAAAATAACTGTTCAGGCGCTGCCACCTGCC
TATTGCACCCTGCAATGGCGCACTGAAATCAATAATGCCTGGTACGCTAT
CCTCTGCGCACACTTGCCCTTGAATTTGGAAAAGGCCCTCCAGGGGACTC
CTCTCCACCTACACCTCCTGCAATTATTATTATAGCTCCCGCCACTCCTG
GAGCAGTTCGCAAGCTGGCCAGCTGCTCTCTCATGTCATCAATGACATGC
CTCGATGCTGCGCCATCGCCTCCTTTTATCAAGTTGAAGAAGCGCCTGTT
AGCGTGCATCTTCAGACCGTCCCCTGCATCGCCGTGCGCGCCTTTGCTGC
TGTTGAGCATCATGATGAACGGTACCCACTGGAACACGCTCGAGCCGCCC
AAGGTGAACGACAGAGCTCTGAGTCGCAGGCTCCAGCTCATCATGCATGA
CCTCCACGCATGTCGGCGCAGGCTGGCACTGCATGGCATGCGGCATGCTG
GCCTCGCCTTCCGCCCATTGATGGCCCAGTGGTGTCGAAGCCGGAAACTT
CTCTCCGGAGTCCATATACTAGCTACCTCCTTGAGCGTAGGCTCTGAGCC
ATGACCGAGAGGAAATTATGCGTGCAGCTTAGCACGACACACCGTACTAA
TGCATGGTGCAGAAGACAACTTGAACGGAGGAACTCAGGCTGCAGCTGAA
GGTGACACACACGCTTCAAAATGAAACTGGAGATCAAGGCAGTGATATAT
CAATATGCACCGCAAACGTCGAACTTCAAGTTGCACGTGCCAGCTCAGGA
CTGCTGAGTCCTGGACCGATGATCTGGAGCTGATGTCAGAGGCCCGAACA
TCTCGCGAACAAAAGTGCACCGCAACCACAATGTCCAGTGCTAACCTCCA
CTAGGGCATGTTACCCTAATTGTGCAATAGTGCCATATTGTAACAGACAT
TGTGACGGGCACAGATGCTGATCAAACATTGTTTAACATGCGTCGAGCTC
TGATCTACTGCGACTGAACGTCACTGTTGCTTGCTGCCGGCTTGCAGGCT
GCGATGCTGCCGGGCCGAACTGAAAACGCCGTCAAAGTCAGATGGAAAAC
GTGCCACAGG

Coding sequence (CDS) from alignment at Contig_85:422414..426973+

>mRNA_12204 ID=mRNA_12204|Name=jgi.p|Trimin1|171815|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=498bp|location=Sequence derived from alignment at Contig_85:422414..426973+ (Tribonema minus UTEX_B_3156 )
ATGCAGTGCAATGCCGCTGCTGTGAAGTTGGCGAGCAGTCGGGCTCCTGC
ACAGCGTTGGAGTCTAGAGGAGGACGACAGACTCACGCGTGCCGTCGAGA
TGTTCGAGGAGAAGAACTGGCGTCGCATCAGCGCCGTGGTGGGGAGCAAG
AAAGCCGTGCAATGCATGCAGAGATGGAAGCGATCGTTGCGTCCTGACTT
GAAAAAGGGACGCTGGACGCACGAGGAGGATGCTCTATTGATTGAACTGA
TTACCCAAGGGTGCAAGACATGGCCCGAGCTCTCCAATAGGATCACTGGG
CGGAGTGCGAAGCAATGCAGAGAGAGGTGGACGCACCATTTGGACCCTGC
CGTCAACAAGGATGTTTTCACACTGAAGGAAGACTGGTTCATCATTTCCA
CCCAGGCCGCCGTTGGGAACCGCTGGAGCCACATTGCTGCGATGCTGCCG
GGCCGAACTGAAAACGCCGTCAAAGTCAGATGGAAAACGTGCCACAGG