mRNA_12219 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|95175
Unique Name	mRNA_12219
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A835YLI1_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLI1_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.560e-73
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 2

Query:  206 MAQAGMSSAAGEGDDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            MAQAGMSSAAGEGDDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY
Sbjct:    1 MAQAGMSSAAGEGDDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 120

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A6H5KZV5_9PHAE (ER membrane protein complex subunit 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV5_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.300e-23
Identity = 56/104 (53.85%), Postives = 72/104 (69.23%), Query Frame = 2

Query:  257 FLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGF-DRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            F +++N+ HN K++  CRTSLCAV GI +GILG TG +GL  YLI Y  VSL+L+ KMG  D S YTA K    +A F   G+   ++T+ILFWTLAY LVY+Y
Sbjct:   26 FYSSENIAHNKKVLEYCRTSLCAVGGIVSGILGLTGLVGLFSYLILYLVVSLSLVVKMGTTDVSLYTAGK--GKLAMFAFGGVGNYALTYILFWTLAYTLVYIY 127

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: F0YEP0_AURAN (ER membrane protein complex subunit 6 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEP0_AURAN)

HSP 1 Score: 74.3 bits (181), Expect = 5.730e-14
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 2

Query:  257 FLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
             LN + +MHNM  I  CR+ L   AG+  GILG T   G + ++ +Y  +SLALL  M  D   YT    +  I   ++ G+    ++F+LFWTL+YALV++Y
Sbjct:    1 MLNREAMMHNMSAIDGCRSYLTIFAGVGAGILGLTSVRGALGFMASYVAISLALLVAMKGDSMAYT----NEAIPNHVIGGVGKYGLSFVLFWTLSYALVHIY 99

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A7S3ZWF8_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWF8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.130e-13
Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 2

Query:  239 EGDDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            E D K   +   + HN+  +  CR+ L     +  G++G TG  GL+ ++ TY   S+ALL +M  +  DYT+      +  F++ G  G +++F+LFWTLAYALV++Y
Sbjct:    8 EEDAKNLFDRDAMAHNLNAVDGCRSYLTLFGAVGAGVVGATGLRGLLFFVGTYVLGSVALLTRMRCNPVDYTS----ESLTKFVIMGAPGYALSFVLFWTLAYALVHIY 112

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A7S3ZWK7_9STRA (ER membrane protein complex subunit 6 n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWK7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.130e-12
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 2

Query:  251 KGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            K   +   + HN+  +  CR+ L     +  G++G TG  GL+ ++ TY   S+ALL +M  +  DYT+      +  F++ G  G +++F+LFWTLAYALV++Y
Sbjct:   50 KNLFDRDAMAHNLNAVDGCRSYLTLFGAVGAGVVGATGLRGLLFFVGTYVLGSVALLTRMRCNPVDYTS----ESLTKFVIMGAPGYALSFVLFWTLAYALVHIY 150

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A7S2WKV8_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKV8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.430e-12
Identity = 40/103 (38.83%), Postives = 54/103 (52.43%), Query Frame = 2

Query:  257 FLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            F + +  MHN   I   RT L  VAG+  G+LG  G  G +LY+  Y  +S  LL  MGFD + +T          F L  +    +++IL WTL YALVY+Y
Sbjct:   15 FFSMEAKMHNDNAIDNIRTYLMMVAGVCAGVLGMNGPQGAVLYIAVYLAISTCLLCAMGFDSTRFTNLSP----LHFTLSAIEKYGLSYILLWTLCYALVYIY 113

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A3S5FCH8_9PLAT (ER membrane protein complex subunit 6 n=2 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5FCH8_9PLAT)

HSP 1 Score: 69.3 bits (168), Expect = 9.200e-12
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 2

Query:  281 HNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYAL 553
            HN+ ++  CRTS+ A++G   GILG TG MG + YL+T   +SL ++ K G +   Y   K     +  L+ G+FG   T+ILFWT  Y +
Sbjct:   35 HNLTVVGYCRTSIAAISGCTAGILGLTGLMGFLFYLLTSCILSLLMMQKAGSNWRKYFLQK-----SSLLIHGIFGEMTTYILFWTFIYGM 120

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A0G4ERR0_VITBC (ER membrane protein complex subunit 6 n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ERR0_VITBC)

HSP 1 Score: 68.6 bits (166), Expect = 1.250e-11
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 2

Query:  248 DKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            D+  +    L HN +++  CR     V+G+A GILG TG  GL+++++    +SL LLA++ FD S Y    K+  I  F   G+    ++FILFWTLAY +VY++
Sbjct:   11 DEQLIIESMLGHNRRVVAHCRNFAAIVSGLAAGILGLTGLWGLLVFVMATLGISLILLARVNFDTSLYFPTVKEVLIGQFW-HGM----MSFILFWTLAYDMVYIF 111

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A6S7NQS7_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7NQS7_LACSI)

HSP 1 Score: 65.1 bits (157), Expect = 7.360e-9
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 2

Query:  263 NAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            N +N+  NMK+I   RT +  + G+  GILG TG MG ++YL+  A  SL L AK GF    Y            LL+G  G  ++F+LFWT  Y  +Y +
Sbjct:  429 NVENMQSNMKVIYYSRTFMSIIGGVIAGILGFTGLMGFVIYLLVMALTSLCLTAKAGFSIHTYFDTWNRV-----LLDGFLGGLLSFVLFWT--YPFIYAF 522

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BLAST of jgi.p|Trimin1|95175 vs. uniprot
Match: A0A0G4FW70_9ALVE (ER membrane protein complex subunit 6 n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FW70_9ALVE)

HSP 1 Score: 61.2 bits (147), Expect = 8.290e-9
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 2

Query:  236 GEGDDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 565
            GE    G + + +L +N +I++ CR     V G+A G+ G T   G++ +L++   +S  LL +MGF+   Y     +  + G L  GL    ++FILFWTL Y +VY++
Sbjct:   13 GENPSAGVVGS-SLAYNRRILSYCRNYAAIVGGVAAGLCGATSLQGVLFFLVSALLMSGVLLVRMGFNFKPYFLTMHEV-VGGQLFAGL----LSFILFWTLVYDIVYIF 116

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|95175 vs. uniprot

BLAST of jgi.p|Trimin1|95175 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YLI1_9STRA	1.560e-73	100.00	ER membrane protein complex subunit 6 n=1 Tax=Trib...	[more]
A0A6H5KZV5_9PHAE	1.300e-23	53.85	ER membrane protein complex subunit 6 n=2 Tax=Ecto...	[more]
F0YEP0_AURAN	5.730e-14	39.81	ER membrane protein complex subunit 6 n=1 Tax=Aure...	[more]
A0A7S3ZWF8_9STRA	1.130e-13	35.78	ER membrane protein complex subunit 6 n=1 Tax=Pela...	[more]
A0A7S3ZWK7_9STRA	2.130e-12	35.24	ER membrane protein complex subunit 6 n=2 Tax=Pela...	[more]
A0A7S2WKV8_9STRA	2.430e-12	38.83	ER membrane protein complex subunit 6 n=1 Tax=Rhiz...	[more]
A0A3S5FCH8_9PLAT	9.200e-12	39.56	ER membrane protein complex subunit 6 n=2 Tax=Prot...	[more]
A0A0G4ERR0_VITBC	1.250e-11	38.68	ER membrane protein complex subunit 6 n=2 Tax=Vitr...	[more]
A0A6S7NQS7_LACSI	7.360e-9	38.61	Uncharacterized protein n=1 Tax=Lactuca saligna Ta...	[more]
A0A0G4FW70_9ALVE	8.290e-9	33.64	ER membrane protein complex subunit 6 n=1 Tax=Chro...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_85	contig	Contig_85:603621..607675 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|95175\|CE95174_271
Description	ER membrane protein complex subunit
COG category	S
Max annot lvl	35493\|Streptophyta
EggNOG OGs	KOG4455@1\|root,KOG4455@2759\|Eukaryota,37VPK@33090\|Viridiplantae,3GJST@35493\|Streptophyta,4JPZE@91835\|fabids
Evalue	1.62e-15
Seed ortholog	3656.XP_008450632.1
Hectar predicted targeting category	signal anchor
Ec32 ortholog description	ER membrane protein complex subunit 6
Ec32 ortholog	Ec-23_001080.1
TranscriptId	95497
Track	FilteredModels1
ProteinId	95175

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|95175	gene_12219	Tribonema minus UTEX_B_3156	gene	Contig_85 603621..607675 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|95175	Trimin1\|95175\|CE95174_271	Tribonema minus UTEX_B_3156	polypeptide	Contig_85 603826..607636 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12219_1	exon_12219_1	Tribonema minus UTEX_B_3156	exon	Contig_85 603621..603964 +
exon_12219_2	exon_12219_2	Tribonema minus UTEX_B_3156	exon	Contig_85 605583..605642 +
exon_12219_3	exon_12219_3	Tribonema minus UTEX_B_3156	exon	Contig_85 606474..606566 +
exon_12219_4	exon_12219_4	Tribonema minus UTEX_B_3156	exon	Contig_85 607566..607675 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_12219	UTR5_12219	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_85 603621..603825 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12219	CDS_12219	Tribonema minus UTEX_B_3156	CDS	Contig_85 603826..603964 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_12219	UTR3_12219	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_85 607637..607675 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_85:603621..607675+
coding sequence from alignment at Contig_85:603621..607675+

spliced messenger RNA

>mRNA_12219 ID=mRNA_12219|Name=jgi.p|Trimin1|95175|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=607bp|location=Sequence derived from alignment at Contig_85:603621..607675+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCGAGCTGCTTTTGCGCGTGCTGGAGGCTTGTCATAGGCTAGCGGTGCA
TTTCCTCGGGACGTAGTGCACGAACACTTGAGGAGGCTCGCCAGGTCCGC
CAGCAACCTGTTTGTGGAAGCAGACATCAGAGCAGAGGCAAGCAACAGAT
TGCGGCAGAGCGAGAGCAGAGCGGCGACCTAGCTGTGACCAGTGCGGCAA
GCGGAATGGCGCAAGCAGGCATGAGCTCGGCTGCGGGAGAAGGGGATGAC
AAGGGCTTCCTGAACGCTCAAAATCTGATGCACAACATGAAGATCATAAC
AGCTTGCAGAACCAGCCTCTGCGCTGTTGCGGGGATTGCTACAGGCATCT
TGGGCTGCACAGGATCAATGGGACTGATCTTGTACCTCATCACCTATGCC
ACAGTCTCGCTGGCGCTGCTGGCTAAGATGGGCTTTGACCGGTCAGACTA
CACCGCCGCCAAAAAGGATAGTGGCATAGCCGGCTTCCTGCTAGAGGGGC
TGTTTGGCTTGTCGATCACCTTCATCCTCTTCTGGACGCTGGCATACGCT
CTTGTCTATGTATACTGATGCTGCCCTCAATGTACACATTTCTCCAGTCA
TATTCTG

protein sequence of jgi.p|Trimin1|95175

>Trimin1|95175|CE95174_271 ID=Trimin1|95175|CE95174_271|Name=jgi.p|Trimin1|95175|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=121bp
MAQAGMSSAAGEGDDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILG
CTGSMGLILYLITYATVSLALLAKMGFDRSDYTAAKKDSGIAGFLLEGLF
GLSITFILFWTLAYALVYVY*

mRNA from alignment at Contig_85:603621..607675+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12219 ID=mRNA_12219|Name=jgi.p|Trimin1|95175|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4055bp|location=Sequence derived from alignment at Contig_85:603621..607675+ (Tribonema minus UTEX_B_3156 )
GGCGAGCTGCTTTTGCGCGTGCTGGAGGCTTGTCATAGGCTAGCGGTGCA
TTTCCTCGGGACGTAGTGCACGAACACTTGAGGAGGCTCGCCAGGTCCGC
CAGCAACCTGTTTGTGGAAGCAGACATCAGAGCAGAGGCAAGCAACAGAT
TGCGGCAGAGCGAGAGCAGAGCGGCGACCTAGCTGTGACCAGTGCGGCAA
GCGGAATGGCGCAAGCAGGCATGAGCTCGGCTGCGGGAGAAGGGGATGAC
AAGGGCTTCCTGAACGCTCAAAATCTGATGCACAACATGAAGATCATAAC
AGCTTGCAGAACCAGCCTCTGCGCTGTTGCGGGGATTGCTACAGGTGAGC
TTGACCTGTAAATCACCAGGCTATCATAAGCACAATCATAGCACGAGCTG
TCTACCGTACAAGGCAAGTGGTATGCATGACTGATGGTATATAGTGTTGC
ACTCATGAAGATGCGCTAAGGAGTTAGTCGGGTTCACATGTGTTGGTTTC
TGATTGTTGAAATTTTTCACACTTGCTTGCAAATGATCACAACTCGCACA
ATGAGTATCAGTTGATGCTTTGCAAATCGGCAGTTTTTGCTTGTTGGAGT
TCGCACTTGGCTGGTGGTCGAATCCTGTGTTTACTGGTGGCACATCAGCC
AGAAACTGCAACTTTTGCCACCAAAGTTTCAAAGGTGTTTGACTGTGTGG
GTACGTTTGTGGACGCACATCACTGGGCGCACAAGAGCTTCAACTGCCCC
GCTAGTCTGTGATAGCAATACTTGATACTTGGCGTTGCAAAAGTCATAGC
ATGCCTAGGGTCGCTGCGGTGCGTGGCGCGCCAGCAGACACTCGGCGATC
CTTCATAGACCACTGTATGCAATCAGTTGCTTCGGCTTTTATGCTTGGGG
ACATGGTCGAGGGGCACTGCTCGCTGACCGTGCCATCTTTCATTTGCGCC
AACATATAGACTGCTGGCGTGCTCACCGCTGTTGGCGTCGTCAGCCGCAG
AAGCAGGGTCAAACCATCATGACTTCCTGCCATATGACGTACATCGCTAG
CTGTGGCATAGCCTATTTACTGTTGGCTAGACTGCAGAAATTCAAGCGCA
GAAGAAGCATACAAGCTCTCGCGCTCAGATGCACAGCGGGAAGAAAACGC
GCCTACGGGAACTGTGTACTCCGGGTTAGCGTGCTGCTTCGCGGTTCTTG
ACGCCATTTGTTGCGTTTGCGTCAGTATTTCAAGCGTTGTTTGGCAACTT
CAAGGTGAAGCTTGACATGCGTGACTGTGACGTGTGAAAGCACTGGTCCT
ATCGTAACAAAGACTTGCCTTGGCCAGCAGCAACGCTCTGGCTCCTTACG
TGGCGACGCATGTTGCAAATGACCACAGCCCCCATAAATGCTGCAGCAGG
CAGCAGAGAGCACGTACTAGAAGTGCGCAGCTTGACAGCGTACTACTATG
TCCATGTAGTCATGTACACCATCATCTATCGTGCCATCGACACTTGAAAC
CCAACCTAAACCCCAACCCTAACTGCCGTGTACGTAGGGGTGATGACGTT
TTCCGGCCATACCCAGCCATGCGCAACATCCTGAAATCGGTGCTTATTTT
GGGGATCTCGCGCCCGTTGATTTGGCCACAATCGGAAAATATTGCTGCCA
TAAAGAAATAACCCAGAGTTGTGGCGCGGCGCTTGGTGCCAGAGGGCTTT
TTCAGGCGTCGGCATTAAGTGCTATAAAACCTGCCCTTACAGGCCTCTGC
TATGATACTGCATGTTACTTTCAGTTACAACCAACTTGTAGCGGCGATTC
TACTCGTCGCCTCACACGGCAATTTGCATGTAGCGGTTATACAGCGGTCA
GAAGGTTGAACTGTACAACTTGAAGGTACTGTGCTGCTTCAGTTTCATCA
GCGTACACTGCTGAAGACTGCTGACTTGCAATTTGGCTGCTTGTTTCGGT
CAACTTCCACAGGCATCTTGGGCTGCACAGGATCAATGGGACTGATCTTG
TACCTCATCACCTATGCCACAGGTGCGCTGCAAGCATCGACATTGTCAAC
CACTTGCTTGCCTGTCTCACACTACATCACTCACCTGCACCATGTCCTGG
TGTGTGGGTAATTTGCCATGTGTCAGTGCTTCATGAGCAAACGGAGCAGC
CGGCTGCAGAATGTCGCAGGTTGTTGCCAATGCTTTATCAATGCGATGCA
GCTAGAGCAATGCTTTATCAATGCGATGCAGCTAGAGCATTCCAACGTGT
CAGCAGCAATACAATCAGTAAGTATCTGGCAGCTGCATGGCTTGACTGTC
GCTTGTGCATGTCTAAGTCATGCAGATAGCTTTGGTATTTGCTGCAAGTG
CTGGTGTGTCTAGCCAATGGCACTCACGATTTGGAGTCATGCTGTGATCT
TGGCACAGCTACAGGAGCATGTGCACTCCAGCGTCAGAGATGCTGTTGTG
AGTTCGGGAGCTGACGGCTATGGGACGGCAGGCTGCCGATGGATGTAGCA
GCTGCCACAACACGAGCAGCATCAGCTTGTGTTTGCACAACTACTGTCGA
GCTTTGTGACTTGTGCGCTTCTCGATGGTCAAGCAGCACGTACATGTGAC
ATGCACTTCGTACAAGACGTGGCTACCATAAAGTTTGCACCTGAGCAGGT
GACCTGGCTGCGTGAACGACAATTGTGATGAGAAGAAAATCCTTAGCGGT
GGTCATATTAAGACTAAGAAGTGGCATGGTGCTCACGACAAATGAATGCC
TGTTTAAGCAGGCAGCCAGCGCTCTCCTATAGCTTGGTCTGTTGATGGCT
AATGCAATGCTGTTGTCGGTGCTTGGCTGTTGCTCTCGCCCTTCCTATGA
CAGTCTCGCTGGCGCTGCTGGCTAAGATGGGCTTTGACCGGTCAGACTAC
ACCGCCGCCAAAAAGGATAGTGGCATAGCCGGCTTCCTGCTAGAGGGTGA
GCTCAACGGCTAACCACCAGCTTGACAGGCAGCAAACATCATCAAATTGC
TCATGCATGATGTGCAGCGTAATGATGGAAGGTGCATACAGGGGGCAGAG
TTGACTGTAGGGTTAGGTTAGGTTTGGCCCTATTGGTGACTGACCTCTAA
CCTCTAAATACATTGTCTGTGGAGATCTGCTAGCCTGCCATGTCATGCCA
GCCAGCGACACAAAGCTGGCACTAGCAGTTACAATGTGTGACTGGTTTGT
GCATTGAGATACAGTGCGATGCGCTGAGCTAGTGCCTCCCCCTCCTGCCT
CACTCTAACCCTAACTATATTGCTAATCTCTGATGGAAGTAACAGTAGCC
CCACAGGGACTTGGTGCCCAGTGGCACTGCCCACAGTGCAGCAAGTAGTT
GTAACTTTATGCAGCATATCTCTATTTCAACTGGCATTCACATGCGCACA
AGCTGATGCCTGACACAATTGAAACGGAGACTGTGGTAGCTGACACATAT
GCAGTTGTGGAATGGCGAGCGGCTGATATGTTGCCATCAAAGGACATGTA
TAGATGCTAGCGAAGCATGTATTGAGTGCTTCCAATATGCTCACCAACTG
CTGGTCCTGGCCGGCTGTGTCGATGGTGCGTATTTGCTTACAGGTGTGCA
TGCTGCTTGCGTGACTATGATGATTAAAGGCGCATTATTGCCTCTTACAA
GCAGTGGGTCCATGACTGTTTTCCTATACGTATGTTGCACGTGCCACATG
CTGTTGCAACAATCTGAGCCATAGCTTCGGCCGCTACTGTTGTGATGCCA
TGTCATCTTCCCAGTTACGTGCGTGTACCACTAATACGTAGCAGCTCTGA
TTGTTGTTGTATGCAAGGTGTGTGCAGCGCCTCACACCTACTGCTGATGG
TCAGCTTTCTCGATCACTTAGTGCCAGCCGATGCGAGTGCATTTGAGAGC
TCTGACATATTGCATCTGTTTGTGCACTTGTCTTTGTTGGTGCAGGGCTG
TTTGGCTTGTCGATCACCTTCATCCTCTTCTGGACGCTGGCATACGCTCT
TGTCTATGTATACTGATGCTGCCCTCAATGTACACATTTCTCCAGTCATA
TTCTG

Coding sequence (CDS) from alignment at Contig_85:603621..607675+

>mRNA_12219 ID=mRNA_12219|Name=jgi.p|Trimin1|95175|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=363bp|location=Sequence derived from alignment at Contig_85:603621..607675+ (Tribonema minus UTEX_B_3156 )
ATGGCGCAAGCAGGCATGAGCTCGGCTGCGGGAGAAGGGGATGACAAGGG
CTTCCTGAACGCTCAAAATCTGATGCACAACATGAAGATCATAACAGCTT
GCAGAACCAGCCTCTGCGCTGTTGCGGGGATTGCTACAGGCATCTTGGGC
TGCACAGGATCAATGGGACTGATCTTGTACCTCATCACCTATGCCACAGT
CTCGCTGGCGCTGCTGGCTAAGATGGGCTTTGACCGGTCAGACTACACCG
CCGCCAAAAAGGATAGTGGCATAGCCGGCTTCCTGCTAGAGGGGCTGTTT
GGCTTGTCGATCACCTTCATCCTCTTCTGGACGCTGGCATACGCTCTTGT
CTATGTATACTGA