mRNA_12089 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171727
Unique NamemRNA_12089
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: A0A836C8G5_9STRA (Gamma-glutamylcyclotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G5_9STRA)

HSP 1 Score: 589 bits (1518), Expect = 1.440e-212
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1
Query:    1 MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLVVKPEGTALAGAAVTATEDVTAL 888
            MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLVVKPEGTALAGAAVTATEDVTAL
Sbjct:    1 MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLVVKPEGTALAGAAVTATEDVTAL 296          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: D7FS26_ECTSI (Gamma-glutamylcyclotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS26_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 6.720e-69
Identity = 128/261 (49.04%), Postives = 158/261 (60.54%), Query Frame = 1
Query:   64 LTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEE-EHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQ---------ALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLS 816
            +T+  TPP +  A A    A    ATAAPA          WDAD GVWVG     +   +P PLWIFGYGSLCWRPE S++ +E+  G + G +R+FAQ+SMDHRGTP  PGLV TLV D  LE+LG R  S  PS T G  Y +P++  + VLA LD REKGGYTR  VDV      GG +E+            ALLYTGTT NPNF + S  +AA  IA A GPSG N EYLF+L+ +L   G  D H++E+ ++V S
Sbjct:    1 MTKTATPP-VPPADATAGGATANPATAAPA---------VWDADAGVWVGDRAAGQEGSVPSPLWIFGYGSLCWRPEASFAGFERFNGEVVGWKRLFAQKSMDHRGTPEFPGLVATLVSDADLEALGQRSASDPPSRTHGVAYLIPENKAEEVLAGLDFREKGGYTRATVDVLPAGGEGGQKEDTTSSEDTAVPTPALLYTGTTSNPNFHVPSIDEAADTIALAVGPSGPNYEYLFSLSQYLEKVGTPDPHLMELSDMVRS 251          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: A0A7S4A4B5_9STRA (Gamma-glutamylcyclotransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4B5_9STRA)

HSP 1 Score: 186 bits (472), Expect = 6.190e-55
Identity = 108/208 (51.92%), Postives = 126/208 (60.58%), Query Frame = 1
Query:  184 WDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAAD---AAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEI 798
            WDA NGV+VG+       +P PLWIFGYGSLCW+ E  +   EK  G ++G  R FAQRS DHRGTPAAPGLV T+V D+ L  L ++D     S   G  YRV D D + VL DLD REKGGYTR +V V     +GG     L ALLY GT DNPNF  ++  D   AA  I  A GPSG N +YL NLATWL   G  D HV  +
Sbjct:    7 WDAKNGVYVGNRAAGSDDVPSPLWIFGYGSLCWKTE--FPHVEKCTGRVRGLTRYFAQRSQDHRGTPAAPGLVATVVRDEDLVKLALQDEGYTGS-CVGTAYRVADADARQVLDDLDFREKGGYTREVVSVV---HAGGT----LDALLYRGTVDNPNFDASAIKDLDAAALTIKDAVGPSGPNRDYLLNLATWLSEVGEEDAHVAAL 204          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: A0A7S2FBV1_9STRA (Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBV1_9STRA)

HSP 1 Score: 174 bits (442), Expect = 4.370e-50
Identity = 99/209 (47.37%), Postives = 127/209 (60.77%), Query Frame = 1
Query:  184 WDADNGVWVGSLEEEHH-QLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNF--WLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIE 801
            WD   GVW G+   +   ++P PL IFGYGSLCWRPE S+         + G  R FAQRS DHRGTP +PGLV T++ D  LE++G+R+    PS T G  Y +  +  + VLADLD REKGGYTR +V V     +GG   E ++ALLY+ T DNPNF   +     AA +IA A GPSG+N EYL NL  WLRS    +  + ++E
Sbjct:   32 WDEAAGVWRGNRAVDAGVEVPDPLVIFGYGSLCWRPEPSFGEGASYPCRVSGWGRFFAQRSTDHRGTPKSPGLVATMLSDAQLEAIGLREAGVPPSSTIGMGYEIATESAEGVLADLDFREKGGYTREVVLVQ--PLAGG---EPVKALLYSATPDNPNFDKTMLDPDAAATVIASAVGPSGSNAEYLSNLTEWLRSLEIEEPSLFDLE 235          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: R1C337_EMIHU (Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C337_EMIHU)

HSP 1 Score: 172 bits (436), Expect = 7.150e-50
Identity = 99/185 (53.51%), Postives = 117/185 (63.24%), Query Frame = 1
Query:  253 WIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNF---WLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEI 798
            WIFGYGSLCWRP+  +   E   G   G  R FAQRS DHRGTP++PGLV T++ D  LE+ G+R+P   PS T G  YRV  DDV  VLA+LD REKGGYTR +V V    R G      ++AL+Y+ T DNP F    LA  A AA  IA AHGPSGAN +YL +LA WLR  G  D HV  +
Sbjct:    1 WIFGYGSLCWRPD--FPHEETLVGRCSGWGRYFAQRSCDHRGTPSSPGLVATMISDAQLEAKGLREPGEPPSTTCGLCYRVGADDVPRVLANLDFREKGGYTREVVQVQ-PARPGAPP---VRALVYSATCDNPLFSPVMLADPAAAALTIASAHGPSGANRDYLESLAAWLREVGEEDAHVAAL 179          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: F0YJ10_AURAN (Gamma-glutamylcyclotransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ10_AURAN)

HSP 1 Score: 166 bits (421), Expect = 2.500e-47
Identity = 104/217 (47.93%), Postives = 121/217 (55.76%), Query Frame = 1
Query:  184 WDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWL------ASAADAAA-IIARAHGPSGANTEYLFNLATWLRSA----GAVDEHVVEIE 801
            WDA  GV+  +      ++P PLWIFGYGSL WRPEE WS Y+ R   ++G RR FAQ S DHRG P APGLV TL+ D            +  + T G  YRVPD D  AVL DLD REKGGYTR I  V   D       E + AL+Y+ T DNPNF        A+A D AA IIA A GPSG N  YL NLA  L        A+   VVE++
Sbjct:    5 WDAAAGVYKNARAASSCEVPNPLWIFGYGSLVWRPEERWSDYDARPCAVRGWRRYFAQLSTDHRGVPGAPGLVCTLLED------------APEATTRGVAYRVPDADADAVLDDLDFREKGGYTRKIARVVFDDG------EAVDALVYSATRDNPNFVQGLDSDDAAAVDKAARIIATAVGPSGDNAAYLLNLADALEGTDPYLAALKARVVELQ 203          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: I7MAH6_TETTS (Gamma-glutamylcyclotransferase n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MAH6_TETTS)

HSP 1 Score: 156 bits (395), Expect = 1.370e-42
Identity = 88/221 (39.82%), Postives = 126/221 (57.01%), Query Frame = 1
Query:  184 WDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHD---RSGGAQEEVLQALLYTGTTDNPNFWL-----ASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLV 822
            WD + G+W  S       LP PLWIFGYGSLC++P +     E+R G+IK   R F Q+S DHRGTP  PGLV TL+ ++  ++ G    +      +G V+R+ + D + VL +LD REKGGY++ I+DV+  D      G Q + +QALLY G  DNPNF             A II+++ GPSG N EYL     +L+S   VD ++ E+ ++   ++
Sbjct:   48 WDENLGIWKNSKAAGQSTLPDPLWIFGYGSLCYKPGDM-KYVEERNGYIKHYTRRFWQKSCDHRGTPENPGLVCTLLSEEEWQTYGDNYENGI---VYGKVFRIDEKDKEEVLNELDFREKGGYSQIILDVYFQDFDENQSGNQVQKVQALLYKGNVDNPNFLQDKDIRGCIKKQAEIISKSIGPSGKNIEYLIKYYQYLQSIDKVDRYMEELVQLATQVI 264          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: A0A0G4EU07_VITBC (Gamma-glutamylcyclotransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EU07_VITBC)

HSP 1 Score: 154 bits (389), Expect = 4.210e-42
Identity = 92/215 (42.79%), Postives = 120/215 (55.81%), Query Frame = 1
Query:  184 WDADNGVWVGSLE--EEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVH--CHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAH------GPSGANTEYLFNLATWLRSAGAVDEHVVEI 798
            WD+  GVWVGS    ++   +P PLW+FGYGSLCW+ +  +   E+  GFI+G  R F Q SMDHRGTPA+PG VVTLV   H  S+ +   S A     G  YR+PD+ V+ VL  LD+REKGGY+R ++DV   C D   G +   + AL Y G   NP +          +   AH      GPSG N EYL+ L  +L +    D HV E+
Sbjct:   15 WDSTLGVWVGSRARADDSFVVPSPLWLFGYGSLCWKADVPYE--EQFVGFIQGYERKFFQASMDHRGTPASPGRVVTLVKHAHPASVPL---SEAEGLVHGVAYRIPDERVEEVLDALDYREKGGYSRLLLDVTEWCADGKEGGRR--VTALAYCGNETNPAYDAFDDESDEGLQQAAHRIFSSTGPSGPNREYLYRLGDFLEAIKVHDRHVAEL 222          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: A0A482T3C9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C9_9ARCH)

HSP 1 Score: 161 bits (408), Expect = 8.130e-42
Identity = 95/222 (42.79%), Postives = 124/222 (55.86%), Query Frame = 1
Query:  181 TWDADNGVWVGSLEEEHHQ--LPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQE-EVLQALLYTGTTDNPNFWLASA-----------------ADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEH 786
            TWD++ GVWVGS     H+   P PL++FGYGSL WRP E             G RR+FAQRS DHRGT   PG+V+ LV D  LE +G    ++  S   G V+ VP D VQ V  DLD+REKGGY+R  + V   D +   ++  V+QAL+YTG  +NPNF+L S                  +    +I+ A GPSG NTEYLF L ++L     VD++
Sbjct:    9 TWDSNLGVWVGSRASAIHEEDFPDPLYVFGYGSLIWRPGEFLEPLPSFHCIAHGYRRIFAQRSCDHRGTVEFPGVVLNLVSDGLLEKMGYILDANGDSGCQGLVWLVPQDKVQIVFEDLDYREKGGYSRHFISVVLKDSTPHHEQGSVVQALVYTGGENNPNFYLPSRLVRDRDEYADPFGLMRKSSVVDLISAAMGPSGPNTEYLFRLVSFLEDRQIVDDY 230          
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Match: A0A0G4HY76_9ALVE (Gamma-glutamylcyclotransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HY76_9ALVE)

HSP 1 Score: 153 bits (387), Expect = 1.410e-41
Identity = 93/223 (41.70%), Postives = 130/223 (58.30%), Query Frame = 1
Query:  184 WDADNGVWVGSL--EEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVH-CHDRSGGAQEEVLQALLYTGTTDNPNFWLASAAD-------AAAIIARAHGPSGANTEYLFNLATWLRSAGA----VDEHVVEIEEVV 810
            W+++ G+W G     +E  ++P+PLWIFGYGSLCWR ++ +S  EK+ G I+G  R F Q S DHRGTP  PG V T++P        +R   +  S   G  YR+ D++   VLA LD REKGGYTR +VDV     +  G+ E  ++A++Y GT DNP +  +S  D       A   I +A GPSG N +YL N+AT+L S GA    +D H + + + V
Sbjct:   24 WNSELGIWEGGAPPHDEGFEVPKPLWIFGYGSLCWRNDD-FSFVEKKTGKIQGFCRRFFQLSTDHRGTPTFPGRVATVIP--------VRGDQADSSWVVGVAYRIADEEADKVLAYLDFREKGGYTRHLVDVSPLGGQESGSTEGPIRAVMYAGTEDNPAY--SSFPDEGEELEKAVRQIHKAVGPSGPNVDYLRNVATFLHSCGAEAEQLDHHTIGLADAV 235          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171727 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8G5_9STRA1.440e-212100.00Gamma-glutamylcyclotransferase n=1 Tax=Tribonema m... [more]
D7FS26_ECTSI6.720e-6949.04Gamma-glutamylcyclotransferase n=1 Tax=Ectocarpus ... [more]
A0A7S4A4B5_9STRA6.190e-5551.92Gamma-glutamylcyclotransferase n=1 Tax=Pelagomonas... [more]
A0A7S2FBV1_9STRA4.370e-5047.37Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=... [more]
R1C337_EMIHU7.150e-5053.51Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=... [more]
F0YJ10_AURAN2.500e-4747.93Gamma-glutamylcyclotransferase n=1 Tax=Aureococcus... [more]
I7MAH6_TETTS1.370e-4239.82Gamma-glutamylcyclotransferase n=1 Tax=Tetrahymena... [more]
A0A0G4EU07_VITBC4.210e-4242.79Gamma-glutamylcyclotransferase n=2 Tax=Vitrella br... [more]
A0A482T3C9_9ARCH8.130e-4242.79Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0G4HY76_9ALVE1.410e-4141.70Gamma-glutamylcyclotransferase n=1 Tax=Chromera ve... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_84contigContig_84:31373..34169 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171727|e_gw1.84.84.1
BRITEko00000
KEGG koko:K07232
GOsGO:0003674,GO:0003824,GO:0003839,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0016603,GO:0016740,GO:0016746,GO:0016755,GO:0016829,GO:0016840,GO:0016842,GO:0034641,GO:0042219,GO:0042221,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044248,GO:0044273,GO:0044424,GO:0044464,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1990748
DescriptionCatalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsCOG3703@1|root,KOG3182@2759|Eukaryota
Evalue1.1e-69
Seed ortholog2880.D7FS26
Hectar predicted targeting categorysignal peptide
TranscriptId172049
TrackFilteredModels1
ProteinId171727
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171727gene_12089Tribonema minus UTEX_B_3156 geneContig_84 31373..34169 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12089_1exon_12089_1Tribonema minus UTEX_B_3156 exonContig_84 31373..31724 +
exon_12089_2exon_12089_2Tribonema minus UTEX_B_3156 exonContig_84 32056..32340 +
exon_12089_3exon_12089_3Tribonema minus UTEX_B_3156 exonContig_84 33102..33225 +
exon_12089_4exon_12089_4Tribonema minus UTEX_B_3156 exonContig_84 34040..34169 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12089CDS_12089Tribonema minus UTEX_B_3156 CDSContig_84 31373..31724 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171727Trimin1|171727|e_gw1.84.84.1Tribonema minus UTEX_B_3156 polypeptideContig_84 31373..34169 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12089 ID=mRNA_12089|Name=jgi.p|Trimin1|171727|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=891bp|location=Sequence derived from alignment at Contig_84:31373..34169+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACTAGGGGATCTAAAGGAATCCTGCTGCCATTGCTTATACTTTCATA
CTGCTACGTGTCTCTGACGGAGGGCTTCACGCCACCAAAGATGACTGCTG
CCTCGGCAGCACCTCATGCTGCGGAAGGCATCACCGCCACAGCGGCACCA
GCAGAGATTGTCACGACCAAAGTAGTTCGCACATGGGACGCTGATAATGG
TGTCTGGGTCGGCTCATTGGAGGAAGAGCACCACCAGCTACCGCAGCCCC
TATGGATTTTCGGTTATGGGTCACTGTGCTGGAGACCAGAGGAGAGCTGG
TCAAGCTATGAAAAGAGGCAGGGCTTCATCAAAGGACGGCGGCGTATGTT
TGCGCAGCGCAGCATGGACCACAGGGGCACACCCGCTGCGCCGGGCCTCG
TCGTAACCCTCGTGCCCGATGACCACCTGGAGAGCCTCGGCATGCGCGAT
CCCTCTAGCGCGCCGTCAGAGACGTTCGGCGCCGTTTACAGGGTGCCTGA
TGATGACGTGCAGGCGGTGCTTGCAGACCTCGACCACCGCGAGAAGGGCG
GCTACACGCGCTGCATCGTGGACGTGCACTGTCACGACCGTAGCGGCGGT
GCGCAGGAGGAGGTGCTGCAGGCCCTGCTGTACACAGGCACCACCGACAA
CCCCAACTTCTGGCTGGCGAGCGCTGCCGACGCTGCGGCAATTATTGCGC
GCGCGCACGGCCCATCGGGCGCCAACACCGAGTACCTGTTCAACCTCGCC
ACATGGCTGAGGTCAGCCGGCGCGGTGGACGAGCACGTTGTGGAAATAGA
AGAGGTGGTGTTGTCGCTAGTGGTAAAGCCAGAGGGCACCGCGCTCGCTG
GGGCTGCGGTCACAGCGACAGAGGACGTCACAGCGTTATGA
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protein sequence of jgi.p|Trimin1|171727

>Trimin1|171727|e_gw1.84.84.1 ID=Trimin1|171727|e_gw1.84.84.1|Name=jgi.p|Trimin1|171727|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=297bp
MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAP
AEIVTTKVVRTWDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESW
SSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRD
PSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGG
AQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLA
TWLRSAGAVDEHVVEIEEVVLSLVVKPEGTALAGAAVTATEDVTAL*
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mRNA from alignment at Contig_84:31373..34169+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12089 ID=mRNA_12089|Name=jgi.p|Trimin1|171727|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2797bp|location=Sequence derived from alignment at Contig_84:31373..34169+ (Tribonema minus UTEX_B_3156 )
ATGACTAGGGGATCTAAAGGAATCCTGCTGCCATTGCTTATACTTTCATA CTGCTACGTGTCTCTGACGGAGGGCTTCACGCCACCAAAGATGACTGCTG CCTCGGCAGCACCTCATGCTGCGGAAGGCATCACCGCCACAGCGGCACCA GCAGAGATTGTCACGACCAAAGTAGTTCGCACATGGGACGCTGATAATGG TGTCTGGGTCGGCTCATTGGAGGAAGAGCACCACCAGCTACCGCAGCCCC TATGGATTTTCGGTTATGGGTCACTGTGCTGGAGACCAGAGGAGAGCTGG TCAAGCTATGAAAAGAGGCAGGGCTTCATCAAAGGACGGCGGCGTATGTT TGGTGAGAATGTCAGCAGATCTGAAGAACTGTACCTCAACTTGTTGTGGC GATACTTGTCGTCTGTAAAAAGTTAGTACGCGTCTTGAAGTCAACAGCAG CGATGCTGAGTGCATCAAAATGCCCCATTTGCGACCATGCTGGCACAGTG CGCTTAAACAACGCGACATTTTGTTTGAAGAAATTGGGTCACTGGTGATC ATTGTGGCACCGACCATCCCAACTGCATCCTCAGTCCCTGCAGCTGTCAG TCGCAGCGCAGACGCCATTCACGTTGCTGACGGCACCAGTTAGACCAACG CCAGTTGCTCTACGCCCATGCGCCCGCCCGCAGCGCAGCGCAGCATGGAC CACAGGGGCACACCCGCTGCGCCGGGCCTCGTCGTAACCCTCGTGCCCGA TGACCACCTGGAGAGCCTCGGCATGCGCGATCCCTCTAGCGCGCCGTCAG AGACGTTCGGCGCCGTTTACAGGGTGCCTGATGATGACGTGCAGGCGGTG CTTGCAGACCTCGACCACCGCGAGAAGGGCGGCTACACGCGCTGCATCGT GGACGTGCACTGTCACGACCGTAGCGGCGGTGCGCAGGAGGAGGTGCTGC AGGCCCTGCTGTACACAGGTGTGCTTGTGTGTACTCGTGGACTGTTTGTG TACTGTATGTGTGTAAGTACCAAGACCCCGAACCAGGTCTGTTTGTATGT GTGAAGGCCGCTACATATGCAGACATGTTGTCTGGCGTGTAAATTCAGTC AGAACACATGCCGTATCCTGACACAGGTGTGTATGTGTACGTGTGTGTGT ACTCGTGGGCTTGTGGTATGTATGTGTGAAGGCTTCAAAACAGGTCTGCA TGTGTACATGCGGGTAGCTTCACAGGCCGGCTGTCTGGCGCGTCAACGCT GTCAGAATGCATGCGGCGATTTGAGCTGCGATGTGCCCCGCAGCTCGGCG CCAGCCCCAGCATTTGGGGCACTGCGACTTGCAGTGCATGTGTGGTCGGC CACCAGCTTTTGACACAAGCCAAGGGGCGGCTACAAGAGACTTTGAGTTG CAGATGTTGCATTCAGTGCATAGCGGTGAGCTGTTCTCTATGTTTCCTCC AGATGCCGTGCACAAAAGGTCACCTGAGCTGGGGTGCTACTTTTTACGAC CATGAGATCTGCAGTGGTGGGATGCCACGTCATCGCCAGCGATCAAATTT TTGAACGCGCCGATCGCGTTGTGTCCTCCGTCGCCTTCACACCTGTGTTT CTCGCTGGCCCTCTACGGTTAACTCGTTGCAATGCATTCTTGGCTTCCCA TTCATCGTCTCGACGTTAGTGATACATAGTGATGGCCCATGTTGACGCAT GTGCGTTCCACTCCTTTTGTGTGCGGCAGGCACCACCGACAACCCCAACT TCTGGCTGGCGAGCGCTGCCGACGCTGCGGCAATTATTGCGCGCGCGCAC GGCCCATCGGGCGCCAACACCGAGTACCTGTTCAACCTCGCCACATGGCT GAGGTGCGGTGTCATCGCCAGAGCAGCAGCACGCGTTGTGATGCGTGTTT CGACAGTGCGGAGCGTTGATGTCTAGTGGTGATTATCATCGCAGTGCGCA TCTGCTTGTGTCACCGCCTCTGACTGCGTACCTCGTGCCCTACTGCGCGA GCTGCAAAGTGTGGGGCACAAATCGTTTGGTCTACAGTCACAGGCAGGGG TTACTCCAGGCGTGGCGGGGGGGCAGTGAGTCCCGCCTTTAGATTTCTCA TCTAGTTCAGAGTTGGCTGTCGTTGCCACACTGAGCCGCTGTATATTGCG CGGTGGCTGACTCGCTGCTGTTGGCGCTGCAAGCGCTGCCGTGTGCACGT ATGTGCATGCGTGCCTTCAAATCGTGCAGCGCACGACACCCTGCACACTG GTCATCAGCTGCGGTGAACGAACACCAGGCAGCTTGTCACAAGTGTTGAT GCTGATCACTTGTGTATGCATGTACATGTATGCATGTACATACTTAGCTT GCAGCAATGCCATTGCGCGGATATTGCACCACCGGCTCGCAAGTCATGCA CTAGCCCGCATGGTCGTAGAGTTAGGGTTTAGGGTTGAGGTTAGGTTTAG GTGAGCCCTGCAGTGATGCCTTTGCACCTTGTTGGTTTCGCCCATGTGTC ATCGTGCCAGAGAGCCGTGCCACAGACGCCGTCAGCCTGAGCGCCGTGTG TCTGGCCATCAAGAAGCCTGCAGAAGCGCAGTGCACTCCAAATTCTGCGC TGCAATCCGCCACCTGTACAAGGTGGCCGACTCAGTTGCGATGCACATTT GTTCTGCTGCCCTGCAGGTCAGCCGGCGCGGTGGACGAGCACGTTGTGGA AATAGAAGAGGTGGTGTTGTCGCTAGTGGTAAAGCCAGAGGGCACCGCGC TCGCTGGGGCTGCGGTCACAGCGACAGAGGACGTCACAGCGTTATGA
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Coding sequence (CDS) from alignment at Contig_84:31373..34169+

>mRNA_12089 ID=mRNA_12089|Name=jgi.p|Trimin1|171727|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=891bp|location=Sequence derived from alignment at Contig_84:31373..34169+ (Tribonema minus UTEX_B_3156 )
ATGACTAGGGGATCTAAAGGAATCCTGCTGCCATTGCTTATACTTTCATA
CTGCTACGTGTCTCTGACGGAGGGCTTCACGCCACCAAAGATGACTGCTG
CCTCGGCAGCACCTCATGCTGCGGAAGGCATCACCGCCACAGCGGCACCA
GCAGAGATTGTCACGACCAAAGTAGTTCGCACATGGGACGCTGATAATGG
TGTCTGGGTCGGCTCATTGGAGGAAGAGCACCACCAGCTACCGCAGCCCC
TATGGATTTTCGGTTATGGGTCACTGTGCTGGAGACCAGAGGAGAGCTGG
TCAAGCTATGAAAAGAGGCAGGGCTTCATCAAAGGACGGCGGCGTATGTT
TGCGCAGCGCAGCATGGACCACAGGGGCACACCCGCTGCGCCGGGCCTCG
TCGTAACCCTCGTGCCCGATGACCACCTGGAGAGCCTCGGCATGCGCGAT
CCCTCTAGCGCGCCGTCAGAGACGTTCGGCGCCGTTTACAGGGTGCCTGA
TGATGACGTGCAGGCGGTGCTTGCAGACCTCGACCACCGCGAGAAGGGCG
GCTACACGCGCTGCATCGTGGACGTGCACTGTCACGACCGTAGCGGCGGT
GCGCAGGAGGAGGTGCTGCAGGCCCTGCTGTACACAGGCACCACCGACAA
CCCCAACTTCTGGCTGGCGAGCGCTGCCGACGCTGCGGCAATTATTGCGC
GCGCGCACGGCCCATCGGGCGCCAACACCGAGTACCTGTTCAACCTCGCC
ACATGGCTGAGGTCAGCCGGCGCGGTGGACGAGCACGTTGTGGAAATAGA
AGAGGTGGTGTTGTCGCTAGTGGTAAAGCCAGAGGGCACCGCGCTCGCTG
GGGCTGCGGTCACAGCGACAGAGGACGTCACAGCGTTATGA
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