mRNA_12080 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171681
Unique NamemRNA_12080
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: A0A836C976_9STRA (Ribosomal protein S13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C976_9STRA)

HSP 1 Score: 299 bits (765), Expect = 9.410e-103
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRHQMHKSG 438
            LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRHQMHKSG
Sbjct:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRHQMHKSG 146
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: D8LGL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL2_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 1.330e-78
Identity = 115/139 (82.73%), Postives = 126/139 (90.65%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            LV+ P+FQHILRILNTNIDGR KV Y+LT + GVGRRF+NLICKKAEVD  KRAG +TADEIEKLVAIIQNPRQFK+PDWFLNRQ+DWKTGK+ Q  +Q I QKLR+DLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR
Sbjct:   43 LVISPEFQHILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 181
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: A0A6H5KYA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA8_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 2.360e-77
Identity = 113/139 (81.29%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            LV+ P+FQHILRILNTNIDGR KV Y+LT + GVGRRF+NLICKKAEVD  KRAG +TADEIEKLVAIIQ PRQFK+PDWFLNRQ+DWKTG + Q  +Q I QKLR+DLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR
Sbjct:    3 LVISPEFQHILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQTPRQFKIPDWFLNRQKDWKTGTTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 141
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: F0XYV2_AURAN (Uncharacterized protein n=4 Tax=Pelagomonadales TaxID=54409 RepID=F0XYV2_AURAN)

HSP 1 Score: 234 bits (597), Expect = 5.080e-77
Identity = 109/139 (78.42%), Postives = 125/139 (89.93%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            LV+ PDFQHILR+LNTNIDGR KVM+ALT +PGVGRRFSN++CKKA VD  KRAG LTADE+EKLVAIIQNP+QFK+P WFLNRQ+D+KTGK  Q FA  + QKLREDLERLKKIR+HRG+RHYWG+RVRGQHTK+TGR
Sbjct:    6 LVISPDFQHILRVLNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAIIQNPKQFKIPAWFLNRQKDYKTGKYSQAFANTLQQKLREDLERLKKIRAHRGLRHYWGIRVRGQHTKSTGR 144
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: A0A7S2W682_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W682_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.600e-74
Identity = 105/139 (75.54%), Postives = 123/139 (88.49%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            L+ G DFQHILRILNTNIDGR KVMYA+T + G+GRRF+N+ICKKAE+D +KRAG L  DEIE+LVAIIQNP QF++P WFLNRQ+D KTGK  Q+FA N+ QKLREDLERLKKIR+HRG+RHYWG++VRGQHTKTTGR
Sbjct:   23 LIAGSDFQHILRILNTNIDGRTKVMYAITNIKGIGRRFANIICKKAEIDMSKRAGELKPDEIERLVAIIQNPLQFRIPQWFLNRQKDHKTGKYSQSFANNLEQKLREDLERLKKIRAHRGLRHYWGIKVRGQHTKTTGR 161
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: A0A7S2BE88_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BE88_9STRA)

HSP 1 Score: 227 bits (578), Expect = 3.610e-74
Identity = 105/139 (75.54%), Postives = 123/139 (88.49%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            L++ PDFQHILRILNTNIDG  KVM++LT + G+GRRF+NLICKKAEVD  KRAG LT DE+EKLVAIIQNP+QFK+P WFLNRQ+D+KTG+  Q F+ N+  KLREDLERLKKIR+HRG+RHYWG+RVRGQHTKTTGR
Sbjct:    3 LIISPDFQHILRILNTNIDGTRKVMFSLTAITGIGRRFANLICKKAEVDPNKRAGELTQDEVEKLVAIIQNPKQFKIPMWFLNRQKDYKTGRYQQAFSNNLGAKLREDLERLKKIRAHRGLRHYWGIRVRGQHTKTTGR 141
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: A0A6T5XJF3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5XJF3_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.060e-72
Identity = 103/139 (74.10%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            L+ GP+FQHILRILNTN++G+  V++ LTK+ G+GRRF++LICKKAEVD  KRAG LTADEIEKLVAIIQNPRQFK+P WFLNRQ+DWKTGK  Q FAQNIA KLR+D+ER+KKIR+HRG+RH+W +RVRGQHT +TGR
Sbjct:    5 LMQGPEFQHILRILNTNVEGKRNVVFGLTKINGLGRRFADLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFKIPTWFLNRQKDWKTGKYSQIFAQNIAAKLRDDIERMKKIRAHRGLRHWWNIRVRGQHTCSTGR 143
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: B7GB86_PHATC (Predicted protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=B7GB86_PHATC)

HSP 1 Score: 222 bits (565), Expect = 2.920e-72
Identity = 103/139 (74.10%), Postives = 125/139 (89.93%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            L+ GP+FQHILRILNTN++G+  V++ LTK+PG+GRRFS+LICKKAEVD  KRAG LTADEIEK+VA+IQNPRQFK+P WFLNRQ+D+KTGK  Q FAQNIA KLR+D+ERLKKIR+HRG+RH+W +RVRGQHT +TGR
Sbjct:    5 LMQGPEFQHILRILNTNVEGKRNVVFGLTKIPGIGRRFSDLICKKAEVDVDKRAGELTADEIEKVVAVIQNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNIAAKLRDDIERLKKIRAHRGLRHWWNIRVRGQHTCSTGR 143
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: A0A7S3PSF1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSF1_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.900e-72
Identity = 104/139 (74.82%), Postives = 122/139 (87.77%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            LVV  DFQHILRILNTNIDGR KVMYALTK+ GVGRRFSN+ICKKAE++ +KRAG L  DE+E+LVAIIQNP QF++P WFLNR++D KTGK  Q F+  + QKLREDLERLKK+R+HRG+RHYWG++VRGQHTKTTGR
Sbjct:    4 LVVSQDFQHILRILNTNIDGRQKVMYALTKIKGVGRRFSNMICKKAEINMSKRAGELQPDEVERLVAIIQNPLQFRIPKWFLNRKKDVKTGKYSQVFSNQLEQKLREDLERLKKMRAHRGVRHYWGIKVRGQHTKTTGR 142
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BLAST of jgi.p|Trimin1|171681 vs. uniprot
Match: A0A7S3JS37_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS37_9STRA)

HSP 1 Score: 219 bits (558), Expect = 4.740e-71
Identity = 103/139 (74.10%), Postives = 120/139 (86.33%), Query Frame = 1 
Query:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGR 417
            LVV  DF  ILR+LNTNIDGR +VMYALT +PGVGRRF+N+ CKKA V+  KRAG LT DE+EK+VAIIQNP+QFK+P WFLNRQ+D+KTGK  Q FA  + QKLREDLERLKKIR+HRG+RHYWG+RVRGQHTK+TGR
Sbjct:    8 LVVSQDFSFILRVLNTNIDGRRRVMYALTAIPGVGRRFANIACKKAGVNMEKRAGELTPDEVEKIVAIIQNPKQFKIPSWFLNRQKDYKTGKYQQAFANTLQQKLREDLERLKKIRAHRGLRHYWGIRVRGQHTKSTGR 146
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171681 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C976_9STRA9.410e-103100.00Ribosomal protein S13 n=1 Tax=Tribonema minus TaxI... [more]
D8LGL2_ECTSI1.330e-7882.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA8_9PHAE2.360e-7781.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
F0XYV2_AURAN5.080e-7778.42Uncharacterized protein n=4 Tax=Pelagomonadales Ta... [more]
A0A7S2W682_9STRA3.600e-7475.54Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
A0A7S2BE88_9STRA3.610e-7475.54Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6T5XJF3_9STRA2.060e-7274.10Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
B7GB86_PHATC2.920e-7274.10Predicted protein n=4 Tax=Bacillariophyta TaxID=28... [more]
A0A7S3PSF1_9STRA4.900e-7274.82Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3JS37_9STRA4.740e-7174.10Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_84contigContig_84:4460..6764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171681|e_gw1.84.101.1
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
KEGG ModuleM00177
KEGG Pathwayko03010,map03010
KEGG koko:K02964
GOsGO:0000184,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005886,GO:0005911,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0022613,GO:0022626,GO:0022627,GO:0030054,GO:0030312,GO:0030490,GO:0030867,GO:0031090,GO:0031503,GO:0031974,GO:0031981,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042254,GO:0042274,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051029,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0051726,GO:0055044,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0070972,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097064,GO:0097159,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098805,GO:0098827,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904
Preferred nameRPS18
DescriptionrRNA binding
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0099@1|root,KOG3311@2759|Eukaryota
Evalue2.19e-79
Seed ortholog2880.D8LGL2
Hectar predicted targeting categoryother localisation
Ec32 ortholog description30s ribosomal protein S13, C-terminal
Ec32 orthologEc-10_002620.1
TranscriptId172003
TrackFilteredModels1
ProteinId171681
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171681gene_12080Tribonema minus UTEX_B_3156 geneContig_84 4460..6764 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12080_1exon_12080_1Tribonema minus UTEX_B_3156 exonContig_84 4460..4617 +
exon_12080_2exon_12080_2Tribonema minus UTEX_B_3156 exonContig_84 4942..5130 +
exon_12080_3exon_12080_3Tribonema minus UTEX_B_3156 exonContig_84 6671..6764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12080CDS_12080Tribonema minus UTEX_B_3156 CDSContig_84 4460..4617 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171681Trimin1|171681|e_gw1.84.101.1Tribonema minus UTEX_B_3156 polypeptideContig_84 4460..6764 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12080 ID=mRNA_12080|Name=jgi.p|Trimin1|171681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=441bp|location=Sequence derived from alignment at Contig_84:4460..6764+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTTGTGGTGGGCCCCGACTTCCAGCACATTCTGCGTATTCTCAACACCAA
CATCGATGGCCGCATCAAGGTCATGTACGCCCTGACCAAGGTGCCTGGTG
TTGGGCGCCGGTTCTCCAACCTCATCTGCAAGAAGGCTGAGGTCGACCAC
ACCAAGCGTGCTGGTATGCTCACAGCCGACGAGATCGAGAAGCTGGTGGC
CATCATCCAGAACCCCCGCCAGTTCAAGGTGCCCGACTGGTTCCTCAACA
GGCAGCGCGACTGGAAGACCGGCAAGTCCGGACAGACCTTTGCCCAGAAC
ATTGCACAGAAGCTGCGCGAGGACCTGGAGCGCCTGAAGAAGATCCGCTC
CCACCGTGGTATCCGCCACTACTGGGGTGTGCGCGTCCGTGGACAGCACA
CAAAGACCACTGGCCGCCACCAGATGCACAAGTCGGGTTAA
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protein sequence of jgi.p|Trimin1|171681

>Trimin1|171681|e_gw1.84.101.1 ID=Trimin1|171681|e_gw1.84.101.1|Name=jgi.p|Trimin1|171681|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=147bp
LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDH
TKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQN
IAQKLREDLERLKKIRSHRGIRHYWGVRVRGQHTKTTGRHQMHKSG*
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mRNA from alignment at Contig_84:4460..6764+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12080 ID=mRNA_12080|Name=jgi.p|Trimin1|171681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2305bp|location=Sequence derived from alignment at Contig_84:4460..6764+ (Tribonema minus UTEX_B_3156 )
CTTGTGGTGGGCCCCGACTTCCAGCACATTCTGCGTATTCTCAACACCAA
CATCGATGGCCGCATCAAGGTCATGTACGCCCTGACCAAGGTGCCTGGTG
TTGGGCGCCGGTTCTCCAACCTCATCTGCAAGAAGGCTGAGGTCGACCAC
ACCAAGCGGTAAGCACAGCAGTATCTGTGATGTAGAGCGTCTGAACCGAC
TGTTGCTACTGCTTTGCGGTGCTCTTCACCAGGCGCTTGTCGGTATTGCA
GTCATACTGTGCTGTGCTTGATCTTCGTGTCCTGATCACTGTTCCCTATC
AATTAACACGGTATTCCGACGCACAATCACAAGGGCTGGGACTTTTGTAG
ACTTGCAGTTGTCAATAATTGCTTGGCGGAATCGGGCTGCCTGTCACGAT
GCCCCTCTGGTCACCCACCTTTTTTGAGCATCATTACAACCGCCAAGCTG
ACATCGCCATGTTCTACTGCTCTCCTGCACAGTGCTGGTATGCTCACAGC
CGACGAGATCGAGAAGCTGGTGGCCATCATCCAGAACCCCCGCCAGTTCA
AGGTGCCCGACTGGTTCCTCAACAGGCAGCGCGACTGGAAGACCGGCAAG
TCCGGACAGACCTTTGCCCAGAACATTGCACAGAAGCTGCGCGAGGACCT
GGAGCGCCTGAAGAAGATCCGGTGAGCGCTGCTGCAAGCGAAACTGTCTG
TTGGCCACAGCGTTCATACCTCCAGATGGCCGTCTGCTACTGTGATGTCG
CCCCCTGAATCAACACCCTTGCAAACATCAGCTGCTCTCTGCGGCTGAAT
GCTATTTATCAAGTACCCATCAAAATTTGAACGCTGTGCTCCACGCTATT
CTTTACAATGGCACCACGCTGCAAGTCGGCCAGGTAGGTCCTCTTTTATT
AATGCCGGCACACAGGCCCACAGCGCTGCAGGAGCTCTGCGCGGGACGCG
TTGCGGATCTGGCGAAGCCGGAAGTACTGCTGGAGAGCACTGCTTCTGGC
AGTTGCGAGCTGGCCGCGTGTGCGTGGGGAACTGGGGAAGGAGGGTATGA
GGAGTGGGGGGCGTGGCGGTGACGGTGACGGTGGCGCCCCCTCTCATGTG
GCGATATCATGACGAGCGACTCAGCTGCAGAATTGACTGGGGAAGCGCTG
CACGAAACCCCCTGTGGTCGTTGTCAGCAGCTTCCAGTAGCCTGGCATAA
TTCAGTTTTGGGAAAGGTGGCCATGACGTGAGGCCGAAGCAACGGGTACC
AGCAGCAATGCAGACTCAGAAAGCCAGAGCGCAAGTGAGATCGTGTCACT
GGCGAACTCGCGTTAGCTGCAACACTGGGTGCTGTGCTGGCTCTATGCAG
TCGGCTGAGGGCAGTTGCGCAGCTGAGAAGCCGCACACGACCCCTCACCT
TTGACTTTACATCCTCAGGGGTAGGGTGTAGCAGCAGCGGCCATAGCGCA
GCGCAACAGCAGCAGTTGCTGTAGAAACGGTGCATGGCGCTGTGATCGCA
GCGGTGCTGCTGTAGGTGCGGACTGATCGTGCTGTTGCAGGTGTCTTCGC
TGCTGCTGCGGCCACTATTTTGACCCGCAAGAGCGTTGGATAACTTTGGT
GTGCACACCTGCACCTTCTGCCGCAGTGCACCTTAGGCTTAGGGTTTTTC
TTCAGGGTGAGGGCCAGCCCTCCAGACGCACATGAATCAGCTTCAATTTG
AGCTTTGCCGATGAGCCTCCAGGGTGAAGATTTGCTCCCTCTCTGATCAG
AAGTCTGAGTGCATTACTTGCCATTATCGATGTAGCGTCCAGCGTGCTTC
AACATGCACGTGTGGAAACAGCGCTGCACCATCGTTGACATGGGTTTCAC
AGGTCATAAAGACGTGTGCGGCGCTGACATCAGCGGCAGATGCATTGGCG
CTGAAAACCACTGTTACAGTTGGCAGATTGTAATCGTGGGGCATATGGCT
TGCTGTCTTACAGTTTGTGGTCTTTGAGTAACCGTCAGGCACCTTGCTGC
ACTTCTAGGGGGAACACGGGGACCCAGCTTGATGAAAGTTGAAGTACACT
GTGTACCTCCTGGAGGACGTCAGGCGTTCAAGAGTAGATTGGAAATGCGT
GCCATGCTGCATTCCAGCAAGGTCATCCATGATCAACTGTTTCTTTCGTC
AAATGTATGCACTGCATCTGACCATGGCTACCCTCTCTCCCCTCCCCCCC
CCTCCCCTCAGCTCCCACCGTGGTATCCGCCACTACTGGGGTGTGCGCGT
CCGTGGACAGCACACAAAGACCACTGGCCGCCACCAGATGCACAAGTCGG
GTTAA
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Coding sequence (CDS) from alignment at Contig_84:4460..6764+

>mRNA_12080 ID=mRNA_12080|Name=jgi.p|Trimin1|171681|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=441bp|location=Sequence derived from alignment at Contig_84:4460..6764+ (Tribonema minus UTEX_B_3156 )
CTTGTGGTGGGCCCCGACTTCCAGCACATTCTGCGTATTCTCAACACCAA
CATCGATGGCCGCATCAAGGTCATGTACGCCCTGACCAAGGTGCCTGGTG
TTGGGCGCCGGTTCTCCAACCTCATCTGCAAGAAGGCTGAGGTCGACCAC
ACCAAGCGTGCTGGTATGCTCACAGCCGACGAGATCGAGAAGCTGGTGGC
CATCATCCAGAACCCCCGCCAGTTCAAGGTGCCCGACTGGTTCCTCAACA
GGCAGCGCGACTGGAAGACCGGCAAGTCCGGACAGACCTTTGCCCAGAAC
ATTGCACAGAAGCTGCGCGAGGACCTGGAGCGCCTGAAGAAGATCCGCTC
CCACCGTGGTATCCGCCACTACTGGGGTGTGCGCGTCCGTGGACAGCACA
CAAAGACCACTGGCCGCCACCAGATGCACAAGTCGGGTTAA
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