Trimin1|94511|CE94510_13 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|94511
Unique Name	Trimin1\|94511\|CE94510_13
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	74

Homology

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BLAST of jgi.p|Trimin1|94511 vs. uniprot
Match: A0A835YIM3_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM3_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.570e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query:    1 MSIEERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP 73
            MSIEERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP
Sbjct:    1 MSIEERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP 73

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BLAST of jgi.p|Trimin1|94511 vs. uniprot
Match: D7FKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG2_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.200e-11
Identity = 32/62 (51.61%), Postives = 48/62 (77.42%), Query Frame = 0

Query:    4 EERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLG 65
            EER + A+ GE+LEDEI+  AT LR+ AD MV +TGA++ + ++P+IDEI  LK++Y+ V+G
Sbjct:   26 EERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMG 87

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|94511 vs. uniprot

BLAST of jgi.p|Trimin1|94511 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YIM3_9STRA	7.570e-41	100.00	Uncharacterized protein n=3 Tax=Tribonema minus Ta...	[more]
D7FKG2_ECTSI	1.200e-11	51.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_84	contig	Contig_84:17078..18732 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|94511	mRNA_12083	Tribonema minus UTEX_B_3156	mRNA	Contig_84 16805..18747 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|94511|CE94510_13 ID=Trimin1|94511|CE94510_13|Name=jgi.p|Trimin1|94511|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=74bp
MSIEERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLI
DEIGELKTQYRAVLGGVVRSNAP*