mRNA_11991 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|171594
Unique Name	mRNA_11991
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835YIJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIJ4_9STRA)

HSP 1 Score: 632 bits (1629), Expect = 8.430e-227
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1

Query:    1 MHTLAGAPLEVLEYATPLVLTRFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGGHDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA 1128
            MHTLAGAPLEVLEYATPLVLTRFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGGHDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA
Sbjct:    1 MHTLAGAPLEVLEYATPLVLTRFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGGHDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA 376

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BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835YS69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS69_9STRA)

HSP 1 Score: 362 bits (928), Expect = 3.460e-118
Identity = 254/397 (63.98%), Postives = 271/397 (68.26%), Query Frame = 1

Query:  157 SAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAE-----------------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEY------------DQFEAF-----KWAYSHGLP---------------------VGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGGHDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA 1128
            S EVAIAAARGGRVHVLQWLHEL+PFSTQTTHSLL+SAASSGQIDAL+W+IAGHDWRGG          AGR +ALVHLRRHG AWDHDAFE AAAHG+TD+MD LVSED PLSVDDAYRRAA+CGQRESLEWLEV FDG T WDENVFSCAAISGSVELLR LHAE                                    XXXXXXXXXXXXXXXX             +AL+  D   E+            D + A      +W + H  P                     VGSGAWDERSC+AAA EGD+TALSLLHTTCRATGGGHD XXXXXXXXGGH DVLRWA+GE CAWD  XXXXXXXXXXXXXXXXXXXXX PCGEAELRCLA
Sbjct:  131 SGEVAIAAARGGRVHVLQWLHELVPFSTQTTHSLLKSAASSGQIDALDWIIAGHDWRGGXXXXXXXXXXAGRFSALVHLRRHGSAWDHDAFEEAAAHGQTDMMDFLVSEDAPLSVDDAYRRAAQCGQRESLEWLEVAFDGETPWDENVFSCAAISGSVELLRCLHAERCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHGLPVSGKLEVKLALEGDDERLEWLRVRGHWFHNPPDMWAAGDNIVKQWLHDHRFPYDTRAAIGVIGTDAVDWILYEVGSGAWDERSCIAAAFEGDMTALSLLHTTCRATGGGHDXXXXXXXXXGGHMDVLRWARGEKCAWDGRXXXXXXXXXXXXXXXXXXXXXCPCGEAELRCLA 527

[Close]

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A836CMY9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY9_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.140e-110
Identity = 173/263 (65.78%), Postives = 186/263 (70.72%), Query Frame = 1

Query:    1 MHTLAGAPLEVLEYATPLVLTRFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEYDQ 789
            MHTLAGAP EVLEY TPLVLT F ATEYW ALAEQGRLDVLQWGRDAHNFCPSA+VAIAAA GG VHVLQWLHELMP+ST TTHSLLE+AA SGQIDAL+W++AGHDW GG          AG LAALV LR  G AWDH+AFE AAA+G+T+VM+ LV    PL V+DAYRRAA CGQR SLEWLE VFD  T WD NVFS AA SG    LRWL+  G                             MALD CDVAYEYDQ
Sbjct:    1 MHTLAGAPREVLEYTTPLVLTHFRATEYWKALAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPMALDACDVAYEYDQ 263

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BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835YXM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM8_9STRA)

HSP 1 Score: 324 bits (831), Expect = 1.760e-105
Identity = 235/383 (61.36%), Postives = 255/383 (66.58%), Query Frame = 1

Query:   61 TRFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAY---------------------------EYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGGHDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA 1128
            + + +  YW  LAE GRLDVLQW RDAHNFCP+ +VA AAA GG  HVLQWLHELMP STQT HSLL+ AASSG IDAL+WV+A HDW GG          AG+LA LV LR HG AWDHDAFE AAA+G+T+VM+ L+  D PL VDD                LE VFD  T WDENVFSCAA SG+VELLRWLHA G XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                     E D     +W  + G      AWDERSC AAA  GDLT L+LLHTTCRATGGGHD         GGH+DVLRWA+GEGCAW XXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA
Sbjct:    7 SHYLSATYWRTLAEHGRLDVLQWARDAHNFCPTVDVATAAACGGHTHVLQWLHELMPCSTQTAHSLLKIAASSGHIDALDWVVASHDWHGGXXXXXXXXXXAGKLAVLVRLRVHGSAWDHDAFEQAAANGQTEVMEWLICADAPLRVDDXXXXXXXXXXXXXXXXLEAVFDE-TPWDENVFSCAAGSGNVELLRWLHAGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIEMVERDDVSRLEWLRARGHAT---AWDERSCAAAAFAGDLTTLALLHTTCRATGGGHDAEVCAAAAAGGHSDVLRWARGEGCAWXXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA 385

[Close]

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835ZE15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE15_9STRA)

HSP 1 Score: 287 bits (734), Expect = 8.660e-89
Identity = 229/430 (53.26%), Postives = 260/430 (60.47%), Query Frame = 1

Query:    1 MHTLAGAPLEVLEYATPLVLT---RFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM----------------------ALDVCDVAYEYDQFEAFKWAYSHGLP------------------------VGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGG------HDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCL 1125
            M  L  AP EVLE+ TPL+L     +    YW  LAE+GRL VLQWG  AH F PSAE AIAA RGGRV VL WLHEL P++ QTTH LL++AA+ GQ   + W+     WR G A ACAAAAA G+L AL  LR H   WDH+ F  AAA+GR +VM+  +    P++VDDA+RRAAR G R SLEWLE  F G T WD +VF+CAA SG VELLRWL A G XXXXXXXXXXXXXXXXXXXXXXXXXXXX                         D     +        +W ++HGL                         VG  AWD R+CVAAA  GDL +L+ LH  CRA GG       HDE        GGHA VLRWA+  GC   XXXXXXXXXXXXXXXXXXXXXXXXPCG AEL+CL
Sbjct:  117 MRALTDAPREVLEHVTPLMLNLLPSYLGAMYWRTLAERGRLGVLQWGAAAHGFRPSAEAAIAAVRGGRVDVLHWLHELAPWTVQTTHCLLKNAATCGQTGVVEWLFGKRGWRDGAAAACAAAAATGQLPALQLLRAHYGRWDHNTFSEAAANGRLEVMEWAMRARAPVAVDDAHRRAARYGARASLEWLEARFYG-TPWDADVFACAAESGDVELLRWLCARGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHVFDSPPALWAAADLATMRWLHAHGLTCDARAMAAALERADATATRWLLYAVGGAAWDHRACVAAAFAGDLASLAPLHAACRAAGGXXXXXXXHDEAVCAAAAAGGHARVLRWARAAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXPCGAAELQCL 545

[Close]

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835YTI3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI3_9STRA)

HSP 1 Score: 248 bits (632), Expect = 5.380e-75
Identity = 158/271 (58.30%), Postives = 184/271 (67.90%), Query Frame = 1

Query:   94 LAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLL 906
            LA++GRLDVLQWG  AH F PSAEVAI AAR G+V +LQWLHE+MP+S +TTHSLL +AA  GQI AL+W+IA HDWRGG          AG L AL  LR HG +W+   F  AAA+G+  VM+ LV+   PL V  AYR AAR GQR SLEWLE  F+  T WDE++F+ AA SG + LL WLH   XXXXXXXXXXXXXXXXXXXXXXX      +ALDVCDVAY   + EAF+WAY HGLPV +    E      A  GD+  L  L
Sbjct:    2 LADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEM-----AERGDVPRLEWL 267

[Close]

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A836CCJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.870e-59
Identity = 164/356 (46.07%), Postives = 192/356 (53.93%), Query Frame = 1

Query:  178 AARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMD-VLVSEDP-PLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVC----------------------------------DVA------------------YEYDQFEAFKWAYSHGLP----------------------VGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGGHDEXXXXXXXXGGHADVLRWAQGEGCA 1017
            AARGG V+VLQWLHEL P++TQTTH +L++AA           +A HDWRGGGA        AG+L AL HL R G   DH+AF  AAA G+ ++M+  LV   P PL + DA RRA R GQR SLEWLE  F     WDE++FSCAA SG + LL+WLH  G XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        DV+                  +    F   +W + H  P                      VGS AWD  +CVAAASEGD T+L+LLH TCRATGGGHD+        GG+ DVLRWA+GEGCA
Sbjct:    1 AARGGHVNVLQWLHELAPWNTQTTHDVLKNAAXXXXXXXXXXXMATHDWRGGGAXXXXXXXXAGKLGALQHLLRCGSEVDHNAFSEAAACGQVELMEWALVEGAPLPLRLRDACRRATRRGQRASLEWLESTFFAAP-WDEDIFSCAAYSGDMTLLQWLHERGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKTEVAMAARGDVSRLDWLRARGHVFHSPPDMWAVADFSTMRWLHKHEFPCNAQAMHAALGNAEAMLWLLYEVGSSAWDGSACVAAASEGDPTSLALLHMTCRATGGGHDQEVCAAAAAGGYGDVLRWARGEGCA 355

[Close]

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835YTK1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK1_9STRA)

HSP 1 Score: 187 bits (474), Expect = 3.890e-51
Identity = 111/223 (49.78%), Postives = 130/223 (58.30%), Query Frame = 1

Query:    1 MHTLAGAPLEVLEYATPLVLT---RFSATEYWNALAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEG 660
            M  LA AP EVLE+ TPL+L+    +    YW  LA++GRLDVLQWG  AH F PSAEVAI AAR G+V +LQWLHE              +AA  G       ++A HDWR GGA ACAAAAAAG L AL  LR HG                   M+ LV    P+ V  AYR A R GQ  SLEWLE VFDG T WDE++F+ AA SG++ LL  LHA+G
Sbjct:   95 MRALADAPREVLEHVTPLMLSLHPSYLGALYWRTLADRGRLDVLQWGAGAHGFRPSAEVAITAARSGQVQILQWLHE--------------NAAFCGXXXXXXXLVARHDWRDGGAAACAAAAAAGELPALERLRAHG------------------TMEWLVDAGAPVHVLRAYRHATRRGQFASLEWLEDVFDGETPWDESIFAYAAESGNLALLDSLHADG 285

[Close]

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835ZAT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.410e-32
Identity = 130/362 (35.91%), Postives = 148/362 (40.88%), Query Frame = 1

Query:   94 LAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTT---------------HSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCD-----VAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGG-HDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAEL 1116
            LA++GRLDVLQWG D H F PSAEVA+ AAR G+V VLQWLHELMP+S                     + E A                                         R H C WD  A   AA +G                            Q E+ EW    +  G        +  A  G V  L+WL A G                                  CD      A E    +A +W       VG  A D  +C+AAAS GDL +L+ LH  CRATGGG HD         GGH DVLRWA+G GCAWD XXXXXXXXXXXXXXXXXXXX   PC  AEL
Sbjct:    2 LADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXEDVFEDATXXXXXXXXXXXXXXXXXX------------------XXXXREHECPWDERASRQAAVNGHV--------------------------QDEAFEW---AYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFP-------CDERAMAAALERGDADAVRWLVHE---VGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAEL 306

[Close]

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Match: A0A835ZCE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE3_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.270e-22
Identity = 75/100 (75.00%), Postives = 85/100 (85.00%), Query Frame = 1

Query:  829 VGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGGHDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAELRCLA 1128
            VGS AWD  +CVAAA+ GDLT+L+LLH TCRATGGGHDE        GG++D +RWA+GEGCAW XXXXXXXXXXXXXXXXXXXXXXXXPCGEA+LRCL+
Sbjct:  330 VGSDAWDGSACVAAAAAGDLTSLALLHATCRATGGGHDEDVCVAAAAGGYSDAMRWARGEGCAWXXXXXXXXXXXXXXXXXXXXXXXXXPCGEADLRCLS 429

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|171594 vs. uniprot

BLAST of jgi.p|Trimin1|171594 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
A0A835YIJ4_9STRA	8.430e-227	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YS69_9STRA	3.460e-118	63.98	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CMY9_9STRA	1.140e-110	65.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YXM8_9STRA	1.760e-105	61.36	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZE15_9STRA	8.660e-89	53.26	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTI3_9STRA	5.380e-75	58.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCJ3_9STRA	5.870e-59	46.07	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTK1_9STRA	3.890e-51	49.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAT3_9STRA	3.410e-32	35.91	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZCE3_9STRA	9.270e-22	75.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_83	contig	Contig_83:510393..511742 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|171594\|e_gw1.83.10.1
Description	Source PGD
COG category	S
Max annot lvl	121069\|Pythiales
EggNOG OGs	2AMK4@1\|root,2RZCC@2759\|Eukaryota,1MIHR@121069\|Pythiales
Evalue	3.21e-06
Seed ortholog	65071.PYU1_T009305
Hectar predicted targeting category	other localisation
TranscriptId	171916
Track	FilteredModels1
ProteinId	171594

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|171594	gene_11991	Tribonema minus UTEX_B_3156	gene	Contig_83 510393..511742 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11991_1	exon_11991_1	Tribonema minus UTEX_B_3156	exon	Contig_83 510393..511220 +
exon_11991_2	exon_11991_2	Tribonema minus UTEX_B_3156	exon	Contig_83 511440..511742 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11991	CDS_11991	Tribonema minus UTEX_B_3156	CDS	Contig_83 510393..511220 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|171594	Trimin1\|171594\|e_gw1.83.10.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_83 510393..511742 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_83:510393..511742+
coding sequence from alignment at Contig_83:510393..511742+

spliced messenger RNA

>mRNA_11991 ID=mRNA_11991|Name=jgi.p|Trimin1|171594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1131bp|location=Sequence derived from alignment at Contig_83:510393..511742+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCATACACTGGCAGGCGCTCCTTTGGAGGTGCTGGAATACGCGACGCC
CCTGGTGCTTACCCGCTTCAGCGCAACGGAGTACTGGAACGCGCTTGCTG
AGCAGGGGCGGCTCGATGTTCTGCAGTGGGGCAGAGATGCCCACAACTTC
TGCCCCTCTGCAGAGGTGGCCATCGCAGCGGCGCGCGGCGGCCGTGTGCA
CGTCCTGCAGTGGCTGCACGAGCTCATGCCCTTCAGCACTCAGACCACCC
ACAGTCTCCTCGAGAGCGCTGCGTCCAGCGGCCAGATTGACGCCCTTAAC
TGGGTCATTGCAGGGCATGACTGGCGCGGCGGAGGCGCCCCTGCGTGCGC
CGCCGCCGCCGCCGCGGGCAGACTCGCCGCGCTTGTGCACCTTCGCAGGC
ACGGCTGCGCGTGGGACCACGATGCTTTCGAGGTGGCTGCGGCGCATGGT
CGGACGGACGTGATGGATGTTCTTGTCTCTGAAGACCCGCCGCTGAGCGT
TGACGACGCCTACCGGCGCGCAGCACGGTGCGGGCAGCGCGAGTCTCTGG
AGTGGCTCGAAGTTGTCTTTGATGGCGGGACGCTGTGGGACGAGAACGTC
TTCTCCTGTGCCGCAATCAGCGGAAGCGTGGAGCTGCTGCGCTGGCTGCA
CGCAGAGGGGTGTCCATGGGACGACCACGCAAGCCGCATGGCTGCCATGG
AGGGCCACATTGAGGTGTTAGACTGGCTACTCGCCGCCAACGCGCCGATG
GCGCTTGATGTGTGCGATGTCGCATACGAATACGATCAGTTTGAGGCCTT
CAAGTGGGCGTACAGCCATGGCCTGCCAGTCGGCAGCGGCGCGTGGGACG
AGCGCTCGTGCGTCGCGGCGGCCTCTGAGGGCGACCTGACGGCGCTGTCG
CTGCTGCACACGACATGCCGCGCGACGGGCGGCGGGCACGACGAGGAGGT
CTGCGCGGCGGCGGCGGCGGGCGGGCACGCGGATGTGCTGCGGTGGGCGC
AAGGCGAGGGGTGCGCGTGGGACGGCAGGGTGTGCGCGGAGGCGAGGGTG
AATGGGCACCTGGACGTGCTCAGGTGGGCAGTCAGCGAGGGCTGCCCATG
CGGGGAGGCGGAGCTGCGGTGCCTGGCGTAG

protein sequence of jgi.p|Trimin1|171594

>Trimin1|171594|e_gw1.83.10.1 ID=Trimin1|171594|e_gw1.83.10.1|Name=jgi.p|Trimin1|171594|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=377bp
MHTLAGAPLEVLEYATPLVLTRFSATEYWNALAEQGRLDVLQWGRDAHNF
CPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALN
WVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHG
RTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENV
FSCAAISGSVELLRWLHAEGCPWDDHASRMAAMEGHIEVLDWLLAANAPM
ALDVCDVAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALS
LLHTTCRATGGGHDEEVCAAAAAGGHADVLRWAQGEGCAWDGRVCAEARV
NGHLDVLRWAVSEGCPCGEAELRCLA*

mRNA from alignment at Contig_83:510393..511742+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11991 ID=mRNA_11991|Name=jgi.p|Trimin1|171594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1350bp|location=Sequence derived from alignment at Contig_83:510393..511742+ (Tribonema minus UTEX_B_3156 )
ATGCATACACTGGCAGGCGCTCCTTTGGAGGTGCTGGAATACGCGACGCC
CCTGGTGCTTACCCGCTTCAGCGCAACGGAGTACTGGAACGCGCTTGCTG
AGCAGGGGCGGCTCGATGTTCTGCAGTGGGGCAGAGATGCCCACAACTTC
TGCCCCTCTGCAGAGGTGGCCATCGCAGCGGCGCGCGGCGGCCGTGTGCA
CGTCCTGCAGTGGCTGCACGAGCTCATGCCCTTCAGCACTCAGACCACCC
ACAGTCTCCTCGAGAGCGCTGCGTCCAGCGGCCAGATTGACGCCCTTAAC
TGGGTCATTGCAGGGCATGACTGGCGCGGCGGAGGCGCCCCTGCGTGCGC
CGCCGCCGCCGCCGCGGGCAGACTCGCCGCGCTTGTGCACCTTCGCAGGC
ACGGCTGCGCGTGGGACCACGATGCTTTCGAGGTGGCTGCGGCGCATGGT
CGGACGGACGTGATGGATGTTCTTGTCTCTGAAGACCCGCCGCTGAGCGT
TGACGACGCCTACCGGCGCGCAGCACGGTGCGGGCAGCGCGAGTCTCTGG
AGTGGCTCGAAGTTGTCTTTGATGGCGGGACGCTGTGGGACGAGAACGTC
TTCTCCTGTGCCGCAATCAGCGGAAGCGTGGAGCTGCTGCGCTGGCTGCA
CGCAGAGGGGTGTCCATGGGACGACCACGCAAGCCGCATGGCTGCCATGG
AGGGCCACATTGAGGTGTTAGACTGGCTACTCGCCGCCAACGCGCCGATG
GCGCTTGATGTGTGCGATGTCGCATACGAATACGATCAGTTTGAGGCCTT
CAAGTGGGCGTACAGCCATGGCCTGCCAGTTGCGGGCAAAATGGAGATGG
AACTGGTTTGCTGGGGTGATGTGGAGCGGCTCGAGTGCCTCCGTGTCAAG
GGTCACTGGTTCCACAACCCCCCCAACATGTGGGCGGCCGGCTGCTTCAG
TGTCAAGCAGTGGCTGCACAAGCACAGATTCCCGTATGACGCGCGCGCTG
CATTCGGCCTCACTGGCACGGAGGAGGTTCAATGGATCCTCTACGAGGTC
GGCAGCGGCGCGTGGGACGAGCGCTCGTGCGTCGCGGCGGCCTCTGAGGG
CGACCTGACGGCGCTGTCGCTGCTGCACACGACATGCCGCGCGACGGGCG
GCGGGCACGACGAGGAGGTCTGCGCGGCGGCGGCGGCGGGCGGGCACGCG
GATGTGCTGCGGTGGGCGCAAGGCGAGGGGTGCGCGTGGGACGGCAGGGT
GTGCGCGGAGGCGAGGGTGAATGGGCACCTGGACGTGCTCAGGTGGGCAG
TCAGCGAGGGCTGCCCATGCGGGGAGGCGGAGCTGCGGTGCCTGGCGTAG

Coding sequence (CDS) from alignment at Contig_83:510393..511742+

>mRNA_11991 ID=mRNA_11991|Name=jgi.p|Trimin1|171594|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1131bp|location=Sequence derived from alignment at Contig_83:510393..511742+ (Tribonema minus UTEX_B_3156 )
ATGCATACACTGGCAGGCGCTCCTTTGGAGGTGCTGGAATACGCGACGCC
CCTGGTGCTTACCCGCTTCAGCGCAACGGAGTACTGGAACGCGCTTGCTG
AGCAGGGGCGGCTCGATGTTCTGCAGTGGGGCAGAGATGCCCACAACTTC
TGCCCCTCTGCAGAGGTGGCCATCGCAGCGGCGCGCGGCGGCCGTGTGCA
CGTCCTGCAGTGGCTGCACGAGCTCATGCCCTTCAGCACTCAGACCACCC
ACAGTCTCCTCGAGAGCGCTGCGTCCAGCGGCCAGATTGACGCCCTTAAC
TGGGTCATTGCAGGGCATGACTGGCGCGGCGGAGGCGCCCCTGCGTGCGC
CGCCGCCGCCGCCGCGGGCAGACTCGCCGCGCTTGTGCACCTTCGCAGGC
ACGGCTGCGCGTGGGACCACGATGCTTTCGAGGTGGCTGCGGCGCATGGT
CGGACGGACGTGATGGATGTTCTTGTCTCTGAAGACCCGCCGCTGAGCGT
TGACGACGCCTACCGGCGCGCAGCACGGTGCGGGCAGCGCGAGTCTCTGG
AGTGGCTCGAAGTTGTCTTTGATGGCGGGACGCTGTGGGACGAGAACGTC
TTCTCCTGTGCCGCAATCAGCGGAAGCGTGGAGCTGCTGCGCTGGCTGCA
CGCAGAGGGGTGTCCATGGGACGACCACGCAAGCCGCATGGCTGCCATGG
AGGGCCACATTGAGGTGTTAGACTGGCTACTCGCCGCCAACGCGCCGATG
GCGCTTGATGTGTGCGATGTCGCATACGAATACGATCAGTTTGAGGCCTT
CAAGTGGGCGTACAGCCATGGCCTGCCAGTCGGCAGCGGCGCGTGGGACG
AGCGCTCGTGCGTCGCGGCGGCCTCTGAGGGCGACCTGACGGCGCTGTCG
CTGCTGCACACGACATGCCGCGCGACGGGCGGCGGGCACGACGAGGAGGT
CTGCGCGGCGGCGGCGGCGGGCGGGCACGCGGATGTGCTGCGGTGGGCGC
AAGGCGAGGGGTGCGCGTGGGACGGCAGGGTGTGCGCGGAGGCGAGGGTG
AATGGGCACCTGGACGTGCTCAGGTGGGCAGTCAGCGAGGGCTGCCCATG
CGGGGAGGCGGAGCTGCGGTGCCTGGCGTAG