mRNA_11984 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171564
Unique NamemRNA_11984
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A836C839_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C839_9STRA)

HSP 1 Score: 646 bits (1667), Expect = 9.190e-234
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 1 
Query:    1 MLLLALLWALLAGVAHALHLRMDTGATTPAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQLGIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSRGGSGXXXXXXXXXXXXDASVPPRQT 1023
            MLLLALLWALLAGVAHALHLRMDTGATTPAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQLGIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSRGGSGXXXXXXXXXXXXDASVPPRQT
Sbjct:    1 MLLLALLWALLAGVAHALHLRMDTGATTPAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQLGIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSRGGSGXXXXXXXXXXXXDASVPPRQT 341
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A2H8TJE7_9HEMI (Radical S-adenosyl methionine domain-containing protein 2 n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=A0A2H8TJE7_9HEMI)

HSP 1 Score: 310 bits (793), Expect = 7.550e-101
Identity = 167/294 (56.80%), Postives = 198/294 (67.35%), Query Frame = 1 
Query:   76 ATTPAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQL---GIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            A T AVP+SVNYH +R CNY C +CFHTA +S     +EA+RGL +LA AGM+KLNF+GGEP + D G F+G+L+ + K +L   GI  VSI++NGSL+ E W  R+G   D+  VSCDSFDA TNR+IGR  GG     A+L  +R+WC      FK+NTVV+A N  E     +  LRP RWKVFQCLLLEGENAG  GALRDAA F V D  F  F  RH  VP LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV+ AL  +GFD  AF  RGGVY WS+
Sbjct:   43 AATVAVPLSVNYHFTRQCNYSCGFCFHTAKTSFVLPLDEAKRGLTMLAEAGMKKLNFSGGEPFVRDGGRFMGELIRFCKTELRWAGIS-VSIVSNGSLIREEWMVRYGEHVDMLAVSCDSFDADTNRTIGRRQGGRTDHVAKLYEVREWCGRHKIAFKVNTVVNAYNVDESFAEHIGRLRPVRWKVFQCLLLEGENAGE-GALRDAARFYVTDEQFRGFLRRHDHVPSLVPENNDAMRDSYLILDEYMRFLNCRNGRKEPSASLLDVGVQHALLGSGFDEKAFLDRGGVYVWSK 334
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A5E4NKV3_9HEMI (Elongator protein 3/MiaB/NifB,Aldolase-type TIM barrel,Radical SAM,Antiviral radical SAM protein viperin n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4NKV3_9HEMI)

HSP 1 Score: 308 bits (789), Expect = 3.240e-100
Identity = 168/295 (56.95%), Postives = 193/295 (65.42%), Query Frame = 1 
Query:   73 GATTPA-VPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQLGIE--CVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            G TTPA VP+SVNYH +R CNY C +CFHTA +S     +EA+RGL +LAA GMRKLNF+GGEP + D G F+G+L+ Y K +L      VSI+TNGSL+ ESW RR+G   DV  VSCDSFDA TNR IGR  G      A+L  +R WC      FKINTVV+A N  E     +  LRP RWKVFQCLLL+GENAG  GALRDA  F V    F  F  RHA V  LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV   L  +GFD  AF  RGGVY W++
Sbjct:   43 GETTPATVPLSVNYHFTRQCNYSCGFCFHTAKTSFVLPLDEAKRGLAMLAAEGMRKLNFSGGEPFIKDGGRFMGELIRYCKTELRRADISVSIVTNGSLIRESWMRRYGEHVDVLAVSCDSFDAETNRKIGRQQGARTDHVAKLNEVRGWCARYKIAFKINTVVNAYNLDESFAERIDYLRPVRWKVFQCLLLDGENAGE-GALRDAGRFYVTGGKFEEFLRRHAGVKTLVPESNDTMRDSYLILDEYMRFLNCRNGKKEPSASLLDVGVRRVLRDSGFDERAFQERGGVYVWNK 336
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: UPI000B93020C (radical S-adenosyl methionine domain-containing protein 2-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B93020C)

HSP 1 Score: 305 bits (781), Expect = 6.170e-99
Identity = 164/290 (56.55%), Postives = 198/290 (68.28%), Query Frame = 1 
Query:   88 AVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQL---GIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            AVP+SVNYH +R CNY C +CFHTA +S     +EA+RGL +LA AGM+KLNF+GGEP + D G F+G+L+ Y K +L   GI  +SI++NGSL+ E W R++G   D+  VSCDSFDA TNRSIGR  G      A+L ++R+WC      FKINTVV+  N +E     +  LRP RWKVFQCLLLEGENAG  GALR+AA F V D  F  F  RHA V  LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV+ AL ++GFD  AF  RGGVY WS+
Sbjct:   54 AVPLSVNYHFTRQCNYSCGFCFHTAKTSFVLPLDEAKRGLTMLAKAGMKKLNFSGGEPFIRDGGRFMGELIKYCKTELSWAGIS-ISIVSNGSLIQEKWMRQYGEHVDMLAVSCDSFDADTNRSIGRQQGTRTDHVAKLYQVREWCGKHKIAFKINTVVNTFNVNELFAEHIERLRPVRWKVFQCLLLEGENAGE-GALRNAARFYVTDEQFEGFLRRHAEVKVLVPETNDAMRDSYLILDEYMRFLNCRNGKKEPSASLLDVGVQHALRRSGFDEQAFLERGGVYLWSK 341
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A2S2PNF1_SCHGA (Radical S-adenosyl methionine domain-containing protein 2 n=2 Tax=Aphidini TaxID=33387 RepID=A0A2S2PNF1_SCHGA)

HSP 1 Score: 306 bits (783), Expect = 8.270e-99
Identity = 164/290 (56.55%), Postives = 196/290 (67.59%), Query Frame = 1 
Query:   85 PAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQLGIE--CVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            PAVP+SVNYH +R CNY C +CFHTA +S     +EA+RGL +LAAAGM+KLNF+GGEP + D G F+G+L+ Y K +L      VSI++NGSL+ E+W  R+G   D+  VSCDSFDA TNR IGR  GG     A+L  +R+WC      FKINTVV+  N +E     +  LRP RWKVFQCL+LEGENAG  GALRDAA F V D  F  F  RHA V  LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV+ AL  +GFD  AF  RGG+Y WS+
Sbjct:   84 PAVPLSVNYHFTRQCNYSCGFCFHTAKTSFVLPLDEAKRGLKMLAAAGMKKLNFSGGEPFVRDGGRFMGELIRYCKTELRWADISVSIVSNGSLIRENWMIRYGEYVDMLAVSCDSFDADTNREIGRRQGGRTDHVAKLYEVREWCGQYKIAFKINTVVNTYNVNEVFTEHIERLRPVRWKVFQCLMLEGENAGE-GALRDAARFYVTDQQFDGFLRRHAEVRTLVPENNDAMRDSYLILDEYMRFLNCRNGKKEPSASLLDVGVQQALRGSGFDEKAFLERGGIYVWSK 372
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: UPI0007639084 (radical S-adenosyl methionine domain-containing protein 2-like n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI0007639084)

HSP 1 Score: 304 bits (779), Expect = 1.200e-98
Identity = 161/291 (55.33%), Postives = 198/291 (68.04%), Query Frame = 1 
Query:   85 PAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQL---GIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            PAVP+SVNYH +R CNY C +CFHTA +S     + A+RGL +LA AGM+KLNF+GGEP + D G F+G+L+ Y K +L   GI  +SI++NGSL+ E W +++G   D+  VSCDSF+A TNR+IGR  G      A+L ++R+WC      FKINTVV+  N +E     +  LRP RWKVFQCLLLEGENAG  GALRDAA F + D  F  F  RHA V  LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV+ AL  +GFD  AF  RGGVY+WS+
Sbjct:   52 PAVPLSVNYHFTRQCNYSCGFCFHTAKTSFVLPLDVAKRGLTMLAEAGMKKLNFSGGEPFIRDGGRFMGELIKYCKTELSWAGIS-ISIVSNGSLIQEKWMKQYGEHVDILAVSCDSFNADTNRAIGRRQGARTDHVAKLYKVREWCGQHKIAFKINTVVNTYNVNEMFAEHIERLRPVRWKVFQCLLLEGENAGE-GALRDAARFYITDEQFDGFLRRHAEVRMLVPENNDAMRDSYLILDEYMRFLNCRNGKKEPSASLLDVGVQDALRGSGFDEKAFLERGGVYEWSK 340
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: J9JZ46_ACYPI (Radical SAM core domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9JZ46_ACYPI)

HSP 1 Score: 302 bits (773), Expect = 1.060e-97
Identity = 163/291 (56.01%), Postives = 197/291 (67.70%), Query Frame = 1 
Query:   85 PAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQL---GIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            PAVP+SVNYH +R CNY C +CFHTA +S     +EA+RGL +LA AGM+KLNF+GGEP + D G F+G+L+ Y K +L   GI  +SI++NGSL+ E W R++G   D+  VSCDSF+A TNR IGR  G      A+L ++R+WC      FKINTVV+  N +E     +  LRP RWKVFQCLLLEGENAG  GALR+AA F V D  F  F  RHA V  LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV+ AL  +GFD  AF  RGGVY WS+
Sbjct:   55 PAVPLSVNYHFTRQCNYSCGFCFHTAKTSFVLPLDEAKRGLTMLAEAGMKKLNFSGGEPFVRDGGRFMGELIKYCKTELRWAGIS-ISIVSNGSLIQEKWMRQYGEHVDMLAVSCDSFNADTNRMIGRQQGARTDHVAKLYQVREWCGQHKIAFKINTVVNTYNVNELFAEHIDRLRPVRWKVFQCLLLEGENAGE-GALRNAARFYVTDEEFNGFLRRHAEVQMLVPENNNAMRDSYLILDEYMRFLNCRNGKKEPSASLLDVGVQHALRGSGFDEQAFLERGGVYLWSK 343
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A5E4MFQ2_9HEMI (Elongator protein 3/MiaB/NifB,Aldolase-type TIM barrel,Radical SAM,Antiviral radical SAM protein viperin n=2 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4MFQ2_9HEMI)

HSP 1 Score: 300 bits (769), Expect = 3.650e-97
Identity = 162/299 (54.18%), Postives = 194/299 (64.88%), Query Frame = 1 
Query:   61 RMDTGATTPA-VPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQLGIE--CVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            R      TPA VPISVNYH +R CNY C +CFHTA +S     +EA+RGL +LA  GM+KLNF+GGEP + D G F+G+L+ Y K +LG     VSI++NGSL+ E+W R++G   D+  VSCDSFDA TNR IGR  G      A+L  +R+WC      FKINTVV+  N +E     +  LRP RWKVFQCLLLEGENAG   ALRDA+ F V    F  F  RH+ V  LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV  AL  +GFD  AF  RGGVY W++
Sbjct:   41 RKSARENTPATVPISVNYHFTRRCNYSCGFCFHTAKTSFVLPLDEAKRGLAMLAKEGMKKLNFSGGEPFIKDGGRFMGELIRYCKTELGWADISVSIVSNGSLIRETWMRKYGEHVDMLAVSCDSFDAETNRKIGRQQGARTDHVAKLNEVREWCTRYKIAFKINTVVNTYNINELFSEHINNLRPVRWKVFQCLLLEGENAGE-DALRDASRFYVTGEEFEEFLRRHSGVKALVPESNDTMRDSYLILDEYMRFLNCRNGKKEPSASLLDVGVRQALRDSGFDERAFQERGGVYVWNK 338
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A6G0U5S9_APHGL (Radical SAM core domain-containing protein n=3 Tax=Aphis TaxID=464929 RepID=A0A6G0U5S9_APHGL)

HSP 1 Score: 301 bits (771), Expect = 1.030e-96
Identity = 163/290 (56.21%), Postives = 194/290 (66.90%), Query Frame = 1 
Query:   88 AVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQL---GIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            AVP+SVNYH +R CNY C +CFHTA +S      EA+RGL +LA AGM+KLNF+GGEP + D G F+G+L+ Y K +L   GI  VSI++NGSL+ E W  R+G   D+  VSCDSFDA TNR+IGR  G      ++L  +R+WC      FKINTVV+  N +E     +  LRP RWKVFQCLLLEGENAG  GALRDAA F V D  F  F  RHA V  LV E    MRDSYLILDE MRFLNC  G K P  SLL+VGV+ AL  +GFD  AF  RGG+Y WS+
Sbjct:  106 AVPLSVNYHFTRQCNYSCGFCFHTAKTSFVLPLAEAKRGLTMLAEAGMKKLNFSGGEPFVRDGGRFMGELIRYCKTELRWAGIS-VSIVSNGSLIQEKWMHRYGEYVDMLAVSCDSFDADTNRTIGRRQGSRTDHVSKLYEVREWCGRHKIAFKINTVVNTYNVNETFAEHIDRLRPVRWKVFQCLLLEGENAGE-GALRDAARFYVTDEQFDGFLRRHARVRTLVPENNDAMRDSYLILDEYMRFLNCRNGKKEPSASLLDVGVQHALRGSGFDEKAFLDRGGIYVWSK 393
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A672HFG0_SALFA (Radical SAM core domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HFG0_SALFA)

HSP 1 Score: 299 bits (765), Expect = 1.100e-96
Identity = 157/292 (53.77%), Postives = 198/292 (67.81%), Query Frame = 1 
Query:   73 GATTPAVPISVNYHVSRLCNYGCKYCFHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLVAYAKEQLGIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRSIGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLELRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPGLVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGFDADAFHTRGGVYDWSR 948
            G++    P SVNYH +R CNY C +CFHTA +S     EEA+RGL LL  AGM K+NF+GGEP L DRG F+G LV + K+ L +  VSI++NGSL+ ESWF+++G   D+  VSCDSFD  TN+ IGR A G  +    L RIR WC+     FKIN+VV+A N  EDM   +++L P RWKVFQCLL++GENAG   ALR+A  F V D  F  F  RH+ V  LV E  + MR+SYLILDE MRFL+C GGGK+P  S+L+VGV+AA+  +GFD   F  RGG Y WS+
Sbjct:   43 GSSRKVTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPVEEAKRGLRLLREAGMEKINFSGGEPFLQDRGAFLGSLVQFCKQDLHLPSVSIVSNGSLIRESWFQKYGEFLDILAVSCDSFDEDTNQLIGR-AQGRKSHLQNLYRIRSWCQQYRVAFKINSVVNAFNVDEDMSEHIVQLDPVRWKVFQCLLIDGENAGQ-SALREARRFVVSDRQFEDFLDRHSGVACLVPESNEKMRNSYLILDEYMRFLDCRGGGKQPSRSILDVGVKAAICFSGFDEKMFLRRGGKYVWSK 332
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A835YME2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME2_9STRA)

HSP 1 Score: 433 bits (1114), Expect = 6.810e-154
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 
Query:    1 MDTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYPSVISKKHADSRPGTASSTSSC 627
            MDTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYPSVISKKHADSRPGTASSTSSC
Sbjct:    1 MDTAVCAPRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYPSVISKKHADSRPGTASSTSSC 209
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A7S3Y1Y7_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y7_HETAK)

HSP 1 Score: 189 bits (480), Expect = 1.310e-57
Identity = 99/181 (54.70%), Postives = 119/181 (65.75%), Query Frame = 1 
Query:   22 PRAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYP 564
            PR  N I++ D+ I G  AGR   ELRADIAP   ENF+ LITGERGI+  + V L Y G++FHRI  D  I GGD+   DGTGR+S       F DENF LRHTGPGVLS CNSGPD+N S F +TLV+ PWLDG+ VVFG L+ + S   L  + + G D  GRP   V+V  CGQL+P
Sbjct:   19 PRHLNNIMYFDMTIDGEDAGRLTFELRADIAPKTCENFKALITGERGITE-DGVKLSYEGSVFHRIVKDYLIQGGDIVNQDGTGRLSSFGEP--FEDENFILRHTGPGVLSMCNSGPDSNGSQFFITLVETPWLDGRHVVFGCLVDQPSLDTLAKIEQVGHD-CGRPSRTVVVARCGQLFP 195
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A1Z3HTG9_9CYAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HTG9_9CYAN)

HSP 1 Score: 181 bits (459), Expect = 1.030e-54
Identity = 97/178 (54.49%), Postives = 118/178 (66.29%), Query Frame = 1 
Query:   34 NPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVS--GLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFG-VLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
            NP VF DI I G+PAGR VIELR D+ P  AENFR L TGE+G  A+ K PL ++G+ FHRI PD    GGD  +G+GTG  S  G T    F DENF L+HTGPG+LS  N+GP TN S F +T V  PWLDGK VVFG V+ G +  K ++AV    G   G+P+ PV++ DCGQL
Sbjct:    6 NPQVFFDITIGGQPAGRIVIELRTDVTPQTAENFRALCTGEQGTGASGK-PLHFKGSSFHRIIPDFMCQGGDFTRGNGTGGESIYGRT----FADENFELKHTGPGILSMANAGPGTNGSQFFLTTVATPWLDGKHVVFGHVVEGMDVVKRMEAV----GSSSGKPRQPVVIADCGQL 174
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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A2P8WER6_9CYAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WER6_9CYAN)

HSP 1 Score: 179 bits (454), Expect = 6.060e-54
Identity = 96/180 (53.33%), Postives = 117/180 (65.00%), Query Frame = 1 
Query:   28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVS--GLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
            A NP VF DI I G+PAGR V+EL+AD  P  AENFR L TGE+G   + K PL Y+G+ FHR+ PD    GGD  +G+GTG  S  G T    F DENF L+HTGPG+LS  N+GP TN S F +T V  PWLDGK VVFG ++ G +  KA++AV   G    GR   PV++ DCGQL
Sbjct:    4 ATNPKVFFDITIGGQPAGRIVMELKADTVPKTAENFRALCTGEKGTGVSGK-PLHYKGSAFHRVIPDFMCQGGDFTRGNGTGGESIYGRT----FEDENFQLKHTGPGILSMANAGPGTNGSQFFLTTVKTPWLDGKHVVFGEVVEGMDVVKAMEAV---GSSPSGRTSQPVVIADCGQL 175
[Close]
BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A7S2GBA6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBA6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.140e-53
Identity = 91/182 (50.00%), Postives = 118/182 (64.84%), Query Frame = 1 
Query:   25 RAHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGL--TAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQLYP 564
            R+ NPIV++DI+I   P+GR +IELRAD+ P AAENFR L TGE      +   + ++GT+FHRI  D    GGD+ +GDGT   S     A+ LF DENF LRHTGPGVLS  NSGPDTN S F ++ V+  W+D   VVFG +  ++S   L  + R G  + GRP+ PV++ D GQLYP
Sbjct:   48 RSLNPIVYLDISIGNEPSGRLMIELRADLVPRAAENFRSLCTGEHP-KHKDGTAMHFKGTMFHRIVKDSLCQGGDLSQGDGTWSASVFRDNADCLFADENFILRHTGPGVLSMANSGPDTNGSQFYLSFVETAWMDEHHVVFGCVCNQDSLTVLYDIERQG-SQSGRPRQPVVIADSGQLYP 227
[Close]
BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A8J6RH24_9CYAN (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A8J6RH24_9CYAN)

HSP 1 Score: 172 bits (435), Expect = 4.430e-51
Identity = 91/178 (51.12%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
            A NP VF DI I G PAGR V+ELRAD+ P  AENFR L TGE+G+  + K PL ++G+ FHRI P+    GGD  +G+GTG  S    +  F DENFTL+HT PG+LS  N+GP+TN S F +T V  PWLDGK VVFG ++ G +   A++ V    G   G+   PV++ DCGQL
Sbjct:    4 ATNPRVFFDITIGGTPAGRIVMELRADVTPKTAENFRALCTGEQGMGTSGK-PLHFKGSSFHRIIPEFMCQGGDFTRGNGTGGESIYGMK--FADENFTLKHTTPGLLSMANAGPNTNGSQFFLTTVATPWLDGKHVVFGSVVEGMDVVSAMEQV----GSRSGQTSEPVVIADCGQL 174
[Close]
BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A2T2W7R5_9CYAN (Peptidyl-prolyl cis-trans isomerase n=16 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T2W7R5_9CYAN)

HSP 1 Score: 172 bits (435), Expect = 4.430e-51
Identity = 91/178 (51.12%), Postives = 116/178 (65.17%), Query Frame = 1 
Query:   28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
            A NP VF DI I G PAGR V+ELRAD+AP  AENFR L TGE+G+  +  VPL ++G+ FHRI P+    GGD  +G+GTG  S    +  F DENFTL+HT PG+LS  N+GP+TN S F +T V  PWLDGK VVFG ++ G +    ++ V    G   G+   PV++ DCGQL
Sbjct:    4 ATNPRVFFDITIGGTPAGRIVMELRADVAPKTAENFRALCTGEKGMGTSG-VPLHFKGSSFHRIIPEFMCQGGDFTRGNGTGGESIYGMK--FADENFTLKHTTPGLLSMANAGPNTNGSQFFLTTVATPWLDGKHVVFGSVVEGMDVVSTMEQV----GSRSGQTSEPVVIADCGQL 174
[Close]
BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: UPI001684B3C2 (peptidylprolyl isomerase n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001684B3C2)

HSP 1 Score: 169 bits (429), Expect = 3.590e-50
Identity = 89/178 (50.00%), Postives = 117/178 (65.73%), Query Frame = 1 
Query:   34 NPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVS--GLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFGVLI-GEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
            NP VF D+ I G+PAGR V+ELRAD+ P  AENFR L TGE+G  ++ K PL Y+G+ FHR+ P+    GGD  +G+GTG  S  G T    F DENF L+HT PG+LS  N+GP TN S F +T V+ PWLDGK VVFG ++ G +  +A++ V    G   G+ +  V++ DCGQL
Sbjct:    6 NPKVFFDVTIGGQPAGRIVMELRADVVPETAENFRALCTGEKGTGSSGK-PLHYKGSSFHRVIPNFMCQGGDFTQGNGTGGESIYGRT----FADENFQLKHTTPGLLSMANAGPGTNGSQFFLTTVETPWLDGKHVVFGAVVEGMDVVRAIEQV----GTPSGKTRQSVVIADCGQL 174
[Close]
BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A812VDW2_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812VDW2_9DINO)

HSP 1 Score: 171 bits (433), Expect = 4.620e-50
Identity = 89/176 (50.57%), Postives = 115/176 (65.34%), Query Frame = 1 
Query:   34 NPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFG-VLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
             P+VF D++I G PAGR  +ELRAD+AP  AENFR L TGE+G   + K PL ++G+ FHR+ PD    GGD   G+GTG  S   ++  F DENFTL+HTGPG+LS  N+GP+TN S F +  V   WLDGK VVFG V  G +  K ++AV    G + G+   PV++ DCGQL
Sbjct:   59 KPVVFFDMSIGGTPAGRITMELRADVAPKTAENFRALCTGEKGTGKSGK-PLHFKGSAFHRVIPDFMCQGGDFTAGNGTGGESIYGSK--FADENFTLKHTGPGILSMANAGPNTNGSQFFLCTVKTQWLDGKHVVFGSVTDGMDVVKKIEAV----GSQSGKTSKPVVIADCGQL 227
[Close]
BLAST of jgi.p|Trimin1|171564 vs. uniprot
Match: A0A8B7BTP3_PHODC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BTP3_PHODC)

HSP 1 Score: 169 bits (428), Expect = 4.920e-50
Identity = 89/178 (50.00%), Postives = 113/178 (63.48%), Query Frame = 1 
Query:   28 AHNPIVFMDIAIAGRPAGRFVIELRADIAPHAAENFRVLITGERGISAANKVPLCYRGTLFHRIEPDGAIYGGDVEKGDGTGRVSGLTAEALFPDENFTLRHTGPGVLSCCNSGPDTNCSLFMVTLVDMPWLDGKQVVFG-VLIGEESYKALDAVRRSGGDEGGRPKHPVLVYDCGQL 558
            A NP+V++D+ I G PAGR VIEL AD+ P  AENFR L TGE+G+  + K PL Y+G  FHR+ P     GGD   G+GTG  S    +  F DENF  +HTGPGV+S  NSGP+TN S F +     PWLDG+ VVFG V+ G +  +A++ V    G +GGR   PV + DCGQL
Sbjct:    2 ASNPMVYLDVTINGVPAGRIVIELFADVTPKTAENFRALCTGEKGLGRSGK-PLHYKGCPFHRVIPGFVSQGGDFTAGNGTGGXSIYGGK--FADENFVKKHTGPGVVSMANSGPNTNGSQFFICTTKTPWLDGRHVVFGHVVDGMDVVRAMEEV----GSQGGRTSEPVAIADCGQL 172
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171564 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C839_9STRA9.190e-234100.00Radical SAM core domain-containing protein n=1 Tax... [more]
A0A2H8TJE7_9HEMI7.550e-10156.80Radical S-adenosyl methionine domain-containing pr... [more]
A0A5E4NKV3_9HEMI3.240e-10056.95Elongator protein 3/MiaB/NifB,Aldolase-type TIM ba... [more]
UPI000B93020C6.170e-9956.55radical S-adenosyl methionine domain-containing pr... [more]
A0A2S2PNF1_SCHGA8.270e-9956.55Radical S-adenosyl methionine domain-containing pr... [more]
UPI00076390841.200e-9855.33radical S-adenosyl methionine domain-containing pr... [more]
J9JZ46_ACYPI1.060e-9756.01Radical SAM core domain-containing protein n=2 Tax... [more]
A0A5E4MFQ2_9HEMI3.650e-9754.18Elongator protein 3/MiaB/NifB,Aldolase-type TIM ba... [more]
A0A6G0U5S9_APHGL1.030e-9656.21Radical SAM core domain-containing protein n=3 Tax... [more]
A0A672HFG0_SALFA1.100e-9653.77Radical SAM core domain-containing protein n=1 Tax... [more]

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BLAST of jgi.p|Trimin1|171564 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YME2_9STRA6.810e-154100.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A7S3Y1Y7_HETAK1.310e-5754.70Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hetero... [more]
A0A1Z3HTG9_9CYAN1.030e-5454.49Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomi... [more]
A0A2P8WER6_9CYAN6.060e-5453.33Peptidyl-prolyl cis-trans isomerase n=1 Tax=filame... [more]
A0A7S2GBA6_9STRA2.140e-5350.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Floren... [more]
A0A8J6RH24_9CYAN4.430e-5151.12Peptidyl-prolyl cis-trans isomerase n=4 Tax=Cyanob... [more]
A0A2T2W7R5_9CYAN4.430e-5151.12Peptidyl-prolyl cis-trans isomerase n=16 Tax=Cyano... [more]
UPI001684B3C23.590e-5050.00peptidylprolyl isomerase n=1 Tax=Pseudanabaena sp.... [more]
A0A812VDW2_9DINO4.620e-5050.57Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbio... [more]
A0A8B7BTP3_PHODC4.920e-5050.00Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phoeni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_83contigContig_83:439014..440732 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171564|e_gw1.83.52.1
BRITEko00000,ko00001
KEGG Pathwayko05164,map05164
KEGG koko:K15045
GOsGO:0001503,GO:0001650,GO:0001775,GO:0001817,GO:0001819,GO:0002252,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002709,GO:0002711,GO:0002718,GO:0002720,GO:0002724,GO:0002726,GO:0002791,GO:0002792,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002828,GO:0002830,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005783,GO:0005789,GO:0005811,GO:0006950,GO:0006952,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0019221,GO:0019866,GO:0019867,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030098,GO:0030154,GO:0030217,GO:0030278,GO:0031090,GO:0031347,GO:0031349,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0034097,GO:0034121,GO:0034123,GO:0034155,GO:0034157,GO:0034163,GO:0034165,GO:0034340,GO:0035710,GO:0042110,GO:0042175,GO:0042221,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043367,GO:0043621,GO:0043900,GO:0043901,GO:0043903,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045069,GO:0045071,GO:0045087,GO:0045088,GO:0045089,GO:0045321,GO:0046631,GO:0046632,GO:0046649,GO:0048037,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048525,GO:0048534,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048869,GO:0050708,GO:0050709,GO:0050776,GO:0050778,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0051239,GO:0051240,GO:0051536,GO:0051539,GO:0051540,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060337,GO:0065007,GO:0070013,GO:0070201,GO:0070887,GO:0071310,GO:0071345,GO:0071357,GO:0080134,GO:0090087,GO:0098542,GO:0098588,GO:0098805,GO:0098827,GO:1903530,GO:1903531,GO:1903900,GO:1903901,GO:1904950,GO:2000551,GO:2000553
Preferred nameRSAD2
Description4Fe-4S single cluster domain
COG categoryO
Max annot lvl33208|Metazoa
EggNOG OGs28IB0@1|root,2QQMH@2759|Eukaryota,38GUG@33154|Opisthokonta,3BHMQ@33208|Metazoa,3CVEF@33213|Bilateria,41XDN@6656|Arthropoda,3SKKR@50557|Insecta,3ECSQ@33342|Paraneoptera
Evalue1.75e-98
Seed ortholog7029.ACYPI005719-PA
Hectar predicted targeting categorysignal peptide
TranscriptId171886
TrackFilteredModels1
ProteinId171564
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171564gene_11984Tribonema minus UTEX_B_3156 geneContig_83 439014..440732 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11984_1exon_11984_1Tribonema minus UTEX_B_3156 exonContig_83 439014..439127 +
exon_11984_2exon_11984_2Tribonema minus UTEX_B_3156 exonContig_83 439773..440135 +
exon_11984_3exon_11984_3Tribonema minus UTEX_B_3156 exonContig_83 440184..440732 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11984CDS_11984Tribonema minus UTEX_B_3156 CDSContig_83 439014..439127 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171564Trimin1|171564|e_gw1.83.52.1Tribonema minus UTEX_B_3156 polypeptideContig_83 439014..440732 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11984 ID=mRNA_11984|Name=jgi.p|Trimin1|171564|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1026bp|location=Sequence derived from alignment at Contig_83:439014..440732+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGCTGCTGGCGCTTCTGTGGGCGCTGCTGGCAGGCGTGGCGCATGC
GCTGCATCTGCGGATGGACACTGGAGCTACGACGCCCGCGGTGCCCATCT
CCGTGAACTACCATGTGAGCAGGCTGTGCAACTACGGGTGCAAGTACTGC
TTCCACACGGCGCTCTCATCTGAGCGCTGCAGCGCGGAGGAGGCGCGCCG
CGGGCTGGTCCTCCTCGCCGCCGCCGGCATGCGCAAGCTCAACTTTGCGG
GCGGAGAGCCGCTGCTGCTTGACCGCGGCGACTTCGTCGGCGACCTGGTG
GCGTATGCGAAAGAGCAGCTGGGAATCGAGTGCGTGTCGATCATCACCAA
CGGGTCGCTCATGACAGAGTCGTGGTTTCGACGGCACGGCACGCGTTTCG
ACGTCTTCGGCGTCTCCTGTGACTCCTTCGATGCCGCCACTAACCGCAGC
ATTGGCCGATTTGCTGGCGGTAGCGCTGCGCCAGCTGCGCGCCTGGCGCG
CATCCGCGACTGGTGCGAGGGCAGCGGCGCGCTGTTCAAGATCAACACGG
TGGTCAGCGCCGCCAACGCGCACGAGGACATGCGCGCGCCGCTGCTGGAG
CTGCGTCCCGCGCGGTGGAAGGTCTTCCAGTGCTTGCTGCTGGAGGGCGA
GAACGCGGGCGGCGTGGGCGCGCTGCGCGACGCCGCCCCCTTCACTGTCC
CCGACGCCGTCTTCGCCGCCTTCGGCGCGCGCCACGCCGCCGTCCCCGGC
CTGGTGCTGGAGCCGCGGCAGCTGATGCGCGACAGCTACCTCATCCTCGA
TGAGCGCATGCGCTTCCTCAACTGCGCCGGCGGCGGCAAGCGCCCTGGCG
AGTCGCTGCTGGAGGTGGGCGTGGAAGCGGCGCTGGCACAGGCGGGCTTC
GACGCCGACGCCTTTCACACGCGCGGCGGGGTGTACGACTGGAGCAGGGG
CGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCAGCGGCGGTGGCGGCGATG
CCAGCGTGCCGCCGCGGCAGACCTGA
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protein sequence of jgi.p|Trimin1|171564

>Trimin1|171564|e_gw1.83.52.1 ID=Trimin1|171564|e_gw1.83.52.1|Name=jgi.p|Trimin1|171564|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=342bp
MLLLALLWALLAGVAHALHLRMDTGATTPAVPISVNYHVSRLCNYGCKYC
FHTALSSERCSAEEARRGLVLLAAAGMRKLNFAGGEPLLLDRGDFVGDLV
AYAKEQLGIECVSIITNGSLMTESWFRRHGTRFDVFGVSCDSFDAATNRS
IGRFAGGSAAPAARLARIRDWCEGSGALFKINTVVSAANAHEDMRAPLLE
LRPARWKVFQCLLLEGENAGGVGALRDAAPFTVPDAVFAAFGARHAAVPG
LVLEPRQLMRDSYLILDERMRFLNCAGGGKRPGESLLEVGVEAALAQAGF
DADAFHTRGGVYDWSRGGSGSGGGGGGSGGGGDASVPPRQT*
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mRNA from alignment at Contig_83:439014..440732+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11984 ID=mRNA_11984|Name=jgi.p|Trimin1|171564|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1719bp|location=Sequence derived from alignment at Contig_83:439014..440732+ (Tribonema minus UTEX_B_3156 )
ATGTTGCTGCTGGCGCTTCTGTGGGCGCTGCTGGCAGGCGTGGCGCATGC
GCTGCATCTGCGGATGGACACTGGAGCTACGACGCCCGCGGTGCCCATCT
CCGTGAACTACCATGTAAGCAGCGCCCGGCGGTGTGCTGGTTTTGGCCTT
GACAAGAGGACAACCATGAAAGAATGGGCAGACGCCCTCATGCCTGTTGC
ATTTGTGAATTGGGGTACTCCAGACGGCGGCACGCAACGAGGGTTGCCAC
ACCTCTTTCACCTGATGGCACCTATGAAATTGGGCACTTCATCTACTCTC
AGGCTGTGATTCTGCGCAGGCATTCAGACTGAGCTGCATGGCAGCTTTAC
CCTGCGTGCAGACAGTACGGAGCGCTCTTTGATATGTATAAGGTGGGCCG
CATTCTATGCAAGACCTAATTGCACTGCTTGCTGCAATGAATATTGGAAT
GATGTTAGCAGCTGCAAATTGAGACGGGGTGGGCAGAGTTAGCTCAAACT
ACACTAGCTTGCACACTAGGTATGTCGCGCACTTTGTAAGACTTGGCTTC
AATGAGCTTCACCTAAGACCATTACGGAGGGTGATGTGTCACCACCGTGG
TATGAGTTTATGATGAACCAGCCCTGGACCTCATCCGGACGGCATTATGG
CATGCTGCTGTTTTCCTCACAAATGGTCGGACCAATGACCATCAAAAATC
TACATAGGCGTCACACGCCTCGCTCACGTTCTCTTCCCACGGCTTCATAC
CATTCGCAGGTGAGCAGGCTGTGCAACTACGGGTGCAAGTACTGCTTCCA
CACGGCGCTCTCATCTGAGCGCTGCAGCGCGGAGGAGGCGCGCCGCGGGC
TGGTCCTCCTCGCCGCCGCCGGCATGCGCAAGCTCAACTTTGCGGGCGGA
GAGCCGCTGCTGCTTGACCGCGGCGACTTCGTCGGCGACCTGGTGGCGTA
TGCGAAAGAGCAGCTGGGAATCGAGTGCGTGTCGATCATCACCAACGGGT
CGCTCATGACAGAGTCGTGGTTTCGACGGCACGGCACGCGTTTCGACGTC
TTCGGCGTCTCCTGTGACTCCTTCGATGCCGCCACTAACCGCAGCATTGG
CCGATTTGCTGGCGGTAGCGCTGTCGGTGGCAGCATGGGCGGCAGCGGCG
GCAGTAGCGGCGCCGGCGAGGCGCCAGCTGCGCGCCTGGCGCGCATCCGC
GACTGGTGCGAGGGCAGCGGCGCGCTGTTCAAGATCAACACGGTGGTCAG
CGCCGCCAACGCGCACGAGGACATGCGCGCGCCGCTGCTGGAGCTGCGTC
CCGCGCGGTGGAAGGTCTTCCAGTGCTTGCTGCTGGAGGGCGAGAACGCG
GGCGGCGTGGGCGCGCTGCGCGACGCCGCCCCCTTCACTGTCCCCGACGC
CGTCTTCGCCGCCTTCGGCGCGCGCCACGCCGCCGTCCCCGGCCTGGTGC
TGGAGCCGCGGCAGCTGATGCGCGACAGCTACCTCATCCTCGATGAGCGC
ATGCGCTTCCTCAACTGCGCCGGCGGCGGCAAGCGCCCTGGCGAGTCGCT
GCTGGAGGTGGGCGTGGAAGCGGCGCTGGCACAGGCGGGCTTCGACGCCG
ACGCCTTTCACACGCGCGGCGGGGTGTACGACTGGAGCAGGGGCGGCAGC
GGCAGCGGCGGCGGCGGCGGCGGCAGCGGCGGTGGCGGCGATGCCAGCGT
GCCGCCGCGGCAGACCTGA
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Coding sequence (CDS) from alignment at Contig_83:439014..440732+

>mRNA_11984 ID=mRNA_11984|Name=jgi.p|Trimin1|171564|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1026bp|location=Sequence derived from alignment at Contig_83:439014..440732+ (Tribonema minus UTEX_B_3156 )
ATGTTGCTGCTGGCGCTTCTGTGGGCGCTGCTGGCAGGCGTGGCGCATGC
GCTGCATCTGCGGATGGACACTGGAGCTACGACGCCCGCGGTGCCCATCT
CCGTGAACTACCATGTGAGCAGGCTGTGCAACTACGGGTGCAAGTACTGC
TTCCACACGGCGCTCTCATCTGAGCGCTGCAGCGCGGAGGAGGCGCGCCG
CGGGCTGGTCCTCCTCGCCGCCGCCGGCATGCGCAAGCTCAACTTTGCGG
GCGGAGAGCCGCTGCTGCTTGACCGCGGCGACTTCGTCGGCGACCTGGTG
GCGTATGCGAAAGAGCAGCTGGGAATCGAGTGCGTGTCGATCATCACCAA
CGGGTCGCTCATGACAGAGTCGTGGTTTCGACGGCACGGCACGCGTTTCG
ACGTCTTCGGCGTCTCCTGTGACTCCTTCGATGCCGCCACTAACCGCAGC
ATTGGCCGATTTGCTGGCGGTAGCGCTGCGCCAGCTGCGCGCCTGGCGCG
CATCCGCGACTGGTGCGAGGGCAGCGGCGCGCTGTTCAAGATCAACACGG
TGGTCAGCGCCGCCAACGCGCACGAGGACATGCGCGCGCCGCTGCTGGAG
CTGCGTCCCGCGCGGTGGAAGGTCTTCCAGTGCTTGCTGCTGGAGGGCGA
GAACGCGGGCGGCGTGGGCGCGCTGCGCGACGCCGCCCCCTTCACTGTCC
CCGACGCCGTCTTCGCCGCCTTCGGCGCGCGCCACGCCGCCGTCCCCGGC
CTGGTGCTGGAGCCGCGGCAGCTGATGCGCGACAGCTACCTCATCCTCGA
TGAGCGCATGCGCTTCCTCAACTGCGCCGGCGGCGGCAAGCGCCCTGGCG
AGTCGCTGCTGGAGGTGGGCGTGGAAGCGGCGCTGGCACAGGCGGGCTTC
GACGCCGACGCCTTTCACACGCGCGGCGGGGTGTACGACTGGAGCAGGGG
CGGCAGCGGCAGCGGCGGCGGCGGCGGCGGCAGCGGCGGTGGCGGCGATG
CCAGCGTGCCGCCGCGGCAGACCTGA
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