Trimin1|171553|e_gw1.83.84.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|171553
Unique NameTrimin1|171553|e_gw1.83.84.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length544
Homology
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BLAST of jgi.p|Trimin1|171553 vs. uniprot
Match: A0A836C8K8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8K8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.750e-62
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0 
Query:    1 MLCKSAWGLCQALRTRNRVRLTLKLLEPPAEVAARIVAVKQVTSLALSGSFADDDTHLLESIPDSIGQLAALKTLKVRGCSFTALXXXXXXXXXXXVLNIEHRNGLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTRTXXXXXXXXXXXXXXXXVKICALTXXXXXXXXXXXXXXXFIEHCNGLXXXXXXXXXXXXXXMLKVSCETETLXXXXXXXXXXXXXXXXXVFCNGLXXXXXXXXXXXXXXXXDIYRSGGV 292
            MLCKSAWGLCQALRTRNRVRLTLKLLEPPAEVAARIVAVKQVTSLALSGSFADDDTHLLESIPDSIGQLAALKTLKVRGCSFTALXXXXXXXXXXXVLNIEHRNGLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTRTXXXXXXXXXXXXXXXXVKICALTXXXXXXXXXXXXXXXFIEHCNGLXXXXXXXXXXXXXXMLKVSCETETLXXXXXXXXXXXXXXXXXVFCNGLXXXXXXXXXXXXXXXXDIYRSGGV
Sbjct:    1 MLCKSAWGLCQALRTRNRVRLTLKLLEPPAEVAARIVAVKQVTSLALSGSFADDDTHLLESIPDSIGQLAALKTLKVRGCSFTALXXXXXXXXXXXVLNIEHRNGLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTRTXXXXXXXXXXXXXXXXVKICALTXXXXXXXXXXXXXXXFIEHCNGLXXXXXXXXXXXXXXMLKVSCETETLXXXXXXXXXXXXXXXXXVFCNGLXXXXXXXXXXXXXXXXDIYRSGGV 292
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171553 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C8K8_9STRA1.750e-62100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 206..230
e-value: 70.0
score: 6.3
coord: 255..278
e-value: 11.0
score: 13.0
coord: 69..92
e-value: 20.0
score: 10.8
coord: 139..163
e-value: 75.0
score: 6.1
coord: 374..398
e-value: 200.0
score: 2.6
coord: 469..493
e-value: 120.0
score: 4.5
coord: 326..350
e-value: 370.0
score: 0.4
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 469..489
e-value: 250.0
score: 3.1
coord: 206..226
e-value: 290.0
score: 2.5
coord: 326..346
e-value: 480.0
score: 0.9
coord: 139..159
e-value: 150.0
score: 4.7
coord: 69..88
e-value: 140.0
score: 5.0
coord: 255..274
e-value: 37.0
score: 9.4
coord: 374..394
e-value: 190.0
score: 3.9
coord: 398..418
e-value: 380.0
score: 1.6
coord: 92..112
e-value: 500.0
score: 0.8
coord: 350..370
e-value: 210.0
score: 3.6
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 315..431
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 246..362
coord: 37..172
coord: 174..239
coord: 425..529
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 194..332
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 246..362
coord: 37..172
coord: 425..529
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 194..332
coord: 315..431
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 174..239
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 240..533
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 50..262
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 29..244
e-value: 2.4E-44
score: 153.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 245..343
e-value: 1.7E-13
score: 52.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 344..534
e-value: 1.6E-48
score: 166.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_83contigContig_83:608216..609847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171553mRNA_12003Tribonema minus UTEX_B_3156 mRNAContig_83 608216..609847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|171553|e_gw1.83.84.1 ID=Trimin1|171553|e_gw1.83.84.1|Name=jgi.p|Trimin1|171553|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=544bp
MLCKSAWGLCQALRTRNRVRLTLKLLEPPAEVAARIVAVKQVTSLALSGS
FADDDTHLLESIPDSIGQLAALKTLKVRGCSFTALPESIGQLAALDVLNI
EHRNGLTALPESIGQLAALRTLKVETCALTALLESIGQLAALEVLNIEDC
NGLTALPESIGQLAALQTLTVTRTALPESIGQLATLQMLTVKICALTALP
ESIGQLAALEVLFIEHCNGLTALPESIGQLAALRMLKVSCETETLTALPE
SIGQLAALRTLQVFCNGLTVLPDSIGQLTALETLDIYRSGGVTVLPDSIG
QLAALVTLEVGCCDSLTALPDSIVQLAALKTLAVNECEALTVLPEGIGQL
AALEGLNIENCSGLTALPESIGQLAALRTLKVDECQGLTALPDSIGQLAA
LRTLKVYDCEGLTALPESIGETATLNDLVIQGVSLTTLPDSISQLAALKT
LGISLCGGLTALPESIGQLVALEELNIEYCSGLTALPEGIGRLAALRRLV
VHDCEALTALPDSISHLPALQHVDITGTRCTRFNVRGCVIICR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf