mRNA_12005 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: A0A835Z7H1_9STRA (Serine/threonine-protein phosphatase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H1_9STRA) HSP 1 Score: 475 bits (1222), Expect = 2.790e-166 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1 Query: 1 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD Sbjct: 48 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 278
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: A0A7S2WM62_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM62_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.360e-69 Identity = 105/195 (53.85%), Postives = 141/195 (72.31%), Query Frame = 1 Query: 112 GKISRRHMRGTASSMASAEILAGL-FTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 G + + HM G +S+A+A+IL L + + E +E DP++ V Y FALD++ LCE+ + +FE ESRCL+++SP VFGD HGNL+DLHFF +N+W G+ L PGR LFLGDYVDRG+ SLE V YL+A+K+L P KVF+LRGNHE RDVN WE++YG+ SF+ QCK RFG +RG +WE +NQ+FD Sbjct: 156 GTVRKGHM-GRMASLATADILEALPIIETDILAETFVELYKDPTASVDYLASDSFALDILRLCEKAKHVFEAESRCLYLESPTFVFGDTHGNLEDLHFFSDNIWRLGMNLHPGRFLFLGDYVDRGLSSLEVVTYLIALKILFPHKVFMLRGNHETRDVNGWEEHYGDRSFIAQCKSRFGEDRGEEVWEELNQVFD 349
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: A0A835YNA0_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA0_9STRA) HSP 1 Score: 225 bits (573), Expect = 2.510e-69 Identity = 101/137 (73.72%), Postives = 114/137 (83.21%), Query Frame = 1 Query: 286 MSLCEQGQELFEKESRCLHIQSPCHVFGDIH-GNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 M LC+Q L E+E+RCL +QSPCHVFGDIH GNLDDLHFF + VW +G RL PGRLLFLGDYVDRG SLECVAYLLA+K+ AP KVFLLRGNHELRDV+SW +YYG GSFL QC RFG ERGA++WEVVN +FD Sbjct: 1 MGLCDQASALLEQEARCLTLQSPCHVFGDIHAGNLDDLHFFADTVWPRGARLAPGRLLFLGDYVDRGAASLECVAYLLALKLTAPRKVFLLRGNHELRDVSSWVEYYGAGSFLAQCSARFGGERGAHVWEVVNTVFD 137
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: A0A6V1NP81_HETAK (Serine/threonine-protein phosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NP81_HETAK) HSP 1 Score: 226 bits (576), Expect = 2.530e-68 Identity = 110/232 (47.41%), Postives = 153/232 (65.95%), Query Frame = 1 Query: 1 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPR-ETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 AAL+ E+ R+ + K + + HVV G + M G +S+A++ +L + + + + + R++ P +V Y + +FA DL+ L ++ + E E RC+ +QSPC+VFGDIHGNL+DL+FF +N+W G+ LT G+ LFLGDYVDRGM LECVAYLLA+K+ P KV+LLRGNHELRDVN WE++YGE SFL QC+DRFG E G +WE VNQ+FD Sbjct: 22 AALQQEIHRISNEVQSKTGIARRDHPMTPVIHVVEEGGSTVQNRM-GRHASVATSNVLQNIPSKKNDELTPRMISMFKAPLDYVDYLKSARFARDLLRLAKRACPILENEPRCVFLQSPCYVFGDIHGNLEDLNFFSDNIWKLGMPLTAGKFLFLGDYVDRGMSGLECVAYLLALKIQNPEKVYLLRGNHELRDVNGWEEHYGERSFLWQCRDRFGEEMGIRVWEEVNQVFD 252
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: A0A7R9UFR4_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR4_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.120e-66 Identity = 101/186 (54.30%), Postives = 133/186 (71.51%), Query Frame = 1 Query: 139 GTASSMASAEILAGLFTPRET-VPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 G A+S+ +A ++A R+ + ER++E P HV + R FA D++ +CE +FE+E R + +QSP +VFGDIHGN++DLHFF +N+W G+ LT GR LFLGDYVDRG+ LECV YLLA+KVL P K++LLRGNHELRDVN WE +Y E SFL QCKDRFG +G +WE VN++FD Sbjct: 91 GRAASITTAAVIADTPISRDDPLAERMIEIFSKPLDHVEHLRSVDFADDILRICELVNPIFEREQRVISLQSPVYVFGDIHGNIEDLHFFADNIWKLGMNLTAGRFLFLGDYVDRGLSGLECVGYLLALKVLYPCKIYLLRGNHELRDVNGWETHYQERSFLRQCKDRFGVAKGIEVWEAVNKVFD 276
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: D8LDZ7_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDZ7_ECTSI) HSP 1 Score: 219 bits (559), Expect = 2.310e-65 Identity = 102/202 (50.50%), Postives = 134/202 (66.34%), Query Frame = 1 Query: 94 HVVSHQGKISRRHMRGTASSMASAEILAGLFTPR--ETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 H+V QG G +SMA+A L+ L R + + +R++ P H Y +FA D++ LC + +FE E RCL IQSP +VFGDIHGNL+DL+FF +N+W G+ LT G+ LFLGDYVDRGM LEC+AYL A+K+ P K+F+LRGNHELRDVN W ++YGE SFL QC+DRFG + G +WE N +FD Sbjct: 86 HLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFD 287
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: D8LDZ8_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ8_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.020e-64 Identity = 109/233 (46.78%), Postives = 148/233 (63.52%), Query Frame = 1 Query: 1 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPR--ETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 +AL E+ RL +++ KVVK + H+V +G R G +S+A+A L GL R + +++L +P H Y +FA DLM LC+ L+E E RC+ +QSP +VFGDIHGNL+DLHFF +N+W G+ LT G+ LFLGDYVDRG+ LEC+AYL ++K+ P K+F+LRGNHELRDVN W +YY E SFL QC++RFG G +WE N +FD Sbjct: 40 SALEYEVRRLTIELQKQTKVVKREHPLEPLIHLVDDKGVGGRGSHMGRTASVATATALRGLGPSRKGDETAQKMLAMFTNPKEHADYLTSPRFAKDLMRLCKGVSHLYEAEPRCVFLQSPVYVFGDIHGNLEDLHFFADNIWKLGMNLTAGKFLFLGDYVDRGLLGLECLAYLFSLKLENPDKLFMLRGNHELRDVNGWVEYYREKSFLWQCQNRFGDSLGEDVWEACNAVFD 272
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: W7UBM2_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBM2_9STRA) HSP 1 Score: 217 bits (553), Expect = 6.030e-64 Identity = 109/234 (46.58%), Postives = 150/234 (64.10%), Query Frame = 1 Query: 4 ALRSELT--RLQEGTK--RKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 +LR L+ R QEG + R KVV + + V G +SR + AS + + A + + ++++ P + Y +FA DL+ LCE+ + +FE E RCL ++SP +VFGDIHGNL+DL+FF +++W G +LT GR LFLGDYVDRGM LECVAYL A+K+++P K+F+LRGNHE RDVN WED+YG+ SFL QC+ RFG E G +WE VNQ+FD Sbjct: 60 SLRDSLSQMRTQEGIRSPRNRKVVALS-------YQVEADGVLSRARVARQASVATAQALSAFPVESTDELASKMIDVFRKPLDKIDYLHSSRFAHDLIQLCERVKPIFEAEDRCLFLESPSYVFGDIHGNLEDLNFFADHLWRLGTQLTAGRFLFLGDYVDRGMNGLECVAYLFALKIISPTKLFMLRGNHETRDVNGWEDHYGDRSFLRQCRARFGRELGEQVWESVNQVFD 286
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: A0A1E7ERA3_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERA3_9STRA) HSP 1 Score: 209 bits (533), Expect = 6.780e-64 Identity = 91/153 (59.48%), Postives = 114/153 (74.51%), Query Frame = 1 Query: 235 PSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 P++HV Y +QFA DL LC + + E E R + IQSPC++FGDIHGNL+DLHFF +N+W G+ LT G LFLGDYVDRGM LE +AYLL+MK+ P KVFLLRGNHE RDVN WE++YGE SF+ QC++RFG + G +WE NQ+FD Sbjct: 5 PNAHVDYLNSEQFAKDLFKLCHKVRSTLEHEPRVVFIQSPCYIFGDIHGNLEDLHFFSDNIWRLGMSLTAGNFLFLGDYVDRGMSCLEVIAYLLSMKLQNPQKVFLLRGNHETRDVNGWEEHYGERSFIWQCRNRFGDDVGYRIWEACNQVFD 157
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Match: A0A7S4IG93_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IG93_9STRA) HSP 1 Score: 219 bits (558), Expect = 8.450e-64 Identity = 103/195 (52.82%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 127 RHMRGTASSMASAEILAGLFTPRET------VPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFD 693 R G +S+A+A IL L +E+ + ER+ + DP+SH+ Y +QFA DL+ + + + +FE E R +QSP +VFGDIHGNL+DLHFF +NVW G+ LT G +FLGD+VDRGM LECVAYL AMK+L P KVFLLRGNHE RDVN WE++YGE SF+ QC++RFG + G +WE NQ+FD Sbjct: 108 RERMGRNASIATAAILNALPDDQESRSSTHALAERITQMFKDPASHMDYMNSEQFARDLLKINAKVKPIFESEPRVAFLQSPAYVFGDIHGNLEDLHFFSDNVWRLGMALTAGNFVFLGDFVDRGMQCLECVAYLFAMKLLLPHKVFLLRGNHETRDVNGWEEHYGERSFIYQCRERFGDDLGFRVWEQTNQVFD 302 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155679 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12005 ID=mRNA_12005|Name=jgi.p|Trimin1|155679|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_83:642083..642775+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCGGCGCTGCGCAGCGAGCTAACTCGCCTGCAGGAGGGCACCAAGCGCAAback to top protein sequence of jgi.p|Trimin1|155679 >Trimin1|155679|gw1.83.110.1 ID=Trimin1|155679|gw1.83.110.1|Name=jgi.p|Trimin1|155679|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASback to top mRNA from alignment at Contig_83:642083..642775+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12005 ID=mRNA_12005|Name=jgi.p|Trimin1|155679|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_83:642083..642775+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_83:642083..642775+ >mRNA_12005 ID=mRNA_12005|Name=jgi.p|Trimin1|155679|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=693bp|location=Sequence derived from alignment at Contig_83:642083..642775+ (Tribonema minus UTEX_B_3156 )back to top |