Trimin1|171498|e_gw1.82.95.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|171498
Unique NameTrimin1|171498|e_gw1.82.95.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length160
Homology
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A836C8M2_9STRA (ATPase beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M2_9STRA)

HSP 1 Score: 317 bits (813), Expect = 1.200e-109
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGVQQDVSQ 159
            MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGVQQDVSQ
Sbjct:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGVQQDVSQ 159          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: B7T1R0_VAULI (ATP synthase subunit beta, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1R0_VAULI)

HSP 1 Score: 251 bits (642), Expect = 2.230e-79
Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 0
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            M  T T++GYV+QIIGPVLDV FPSGNLPKIYNA+NV N  +IIVCEVQQLLGDNKVRAV+MSATDGLKRG+EV DTGAPI+VPVG+ TLGRIFNILGEPVDNLG++    TLPIHR+AP FT+LETTP+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MQTTSTDLGYVTQIIGPVLDVVFPSGNLPKIYNAINVLNKKNIIVCEVQQLLGDNKVRAVAMSATDGLKRGIEVHDTGAPINVPVGEVTLGRIFNILGEPVDNLGEISGAPTLPIHREAPSFTDLETTPSIFETGIKVVDLLAPYRRGGKIGL 153          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A7S6U9Y1_9STRA (ATP synthase subunit beta, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6U9Y1_9STRA)

HSP 1 Score: 248 bits (632), Expect = 7.660e-78
Identity = 119/152 (78.29%), Postives = 137/152 (90.13%), Query Frame = 0
Query:    2 TATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            T++  N GYV+QIIGPV+DVTFPSG LPKIYNA+++K  +  I+CEVQQLLGDNKVRAVSMSATDGL+R VEV+DTGAPI+VPVG+ TLGRIFN+LGEPVDNLGDVD++ TLPIHR APKFT+LET PAIFETGIKVVDLLAPYRRGG  G+
Sbjct:    3 TSSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGL 154          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A7T7IGP2_9STRA (ATP synthase subunit beta n=1 Tax=Nematochrysopsis sessilis var. vectensis TaxID=2797601 RepID=A0A7T7IGP2_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.160e-77
Identity = 120/153 (78.43%), Postives = 136/153 (88.89%), Query Frame = 0
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            MTAT+  +GYV+QIIGPVLD+TFPSGNLP IYNA+NV+  + IIVCEVQQLLGDNKVRAVSMSATDGL+RGV+ IDTGAPI+VPVG  TLGRIFN+LGEPVD LGDVDR+ T PIHR AP FT+LET P+IFETGIKVVDLLAPYR+GG  G+
Sbjct:    1 MTATKFGVGYVTQIIGPVLDITFPSGNLPAIYNAINVQAKNGIIVCEVQQLLGDNKVRAVSMSATDGLQRGVDAIDTGAPINVPVGVCTLGRIFNVLGEPVDELGDVDRSVTFPIHRPAPAFTDLETQPSIFETGIKVVDLLAPYRKGGKIGL 153          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A1X9PV05_9RHOD (ATP synthase subunit beta n=4 Tax=Compsopogonophyceae TaxID=930023 RepID=A0A1X9PV05_9RHOD)

HSP 1 Score: 242 bits (618), Expect = 9.400e-76
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 0
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            M +T  NIG V+QIIGPVLD+ F SG LPK++NAV V +GD II CEVQQLLGDN+VRAV+MS+TDGLKRGVEV+D+GAPISVPVG PTLGRIFN+LGEPVDNLGDV + +TLPIHR AP FT+LET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MVSTIKNIGTVTQIIGPVLDIEFNSGELPKVFNAVTVNSGDKIITCEVQQLLGDNRVRAVAMSSTDGLKRGVEVVDSGAPISVPVGTPTLGRIFNVLGEPVDNLGDVSKQDTLPIHRPAPLFTQLETKPSIFETGIKVVDLLAPYRRGGKIGL 153          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A7T7DA94_9STRA (ATP synthase subunit beta (Fragment) n=2 Tax=Tetrasporopsidaceae TaxID=2797588 RepID=A0A7T7DA94_9STRA)

HSP 1 Score: 242 bits (618), Expect = 9.400e-76
Identity = 117/148 (79.05%), Postives = 133/148 (89.86%), Query Frame = 0
Query:    6 TNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            +N+GYVSQIIGPVLD+TFPSG LP+I++AV+VK+   IIVCE+QQLLGDNKVRAVSMSATDGL+RG E IDT APISVPVG+ TLGRIFN+LGEPVD +G+V  T TLPIHRDAPKFTELET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    6 SNVGYVSQIIGPVLDITFPSGKLPQIFHAVHVKDNSKIIVCEIQQLLGDNKVRAVSMSATDGLRRGAEAIDTKAPISVPVGKITLGRIFNVLGEPVDEMGEVLATETLPIHRDAPKFTELETKPSIFETGIKVVDLLAPYRRGGKIGL 153          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: C6KIS4_AURAN (ATP synthase subunit beta, chloroplastic n=3 Tax=Pelagomonadales TaxID=54409 RepID=C6KIS4_AURAN)

HSP 1 Score: 233 bits (594), Expect = 3.710e-72
Identity = 110/154 (71.43%), Postives = 131/154 (85.06%), Query Frame = 0
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGD-SIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            M    TN+G V+QIIGPVLD+ F SG LPK+YNA+++     +++VCEVQQLLGDNKVRAVSMS+TDG+KRG+E +DTG+PISVPVG PTLGRIFNILG+PVD +G VD + TLPIHRDAP FTELET P++FETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MLEVSTNVGNVTQIIGPVLDIEFTSGKLPKVYNAIDITMASGAVVVCEVQQLLGDNKVRAVSMSSTDGMKRGIEAVDTGSPISVPVGAPTLGRIFNILGQPVDEMGPVDSSETLPIHRDAPAFTELETKPSVFETGIKVVDLLAPYRRGGKIGL 154          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: M4IV75_CALTB (ATP synthase subunit beta, chloroplastic n=7 Tax=Florideophyceae TaxID=2806 RepID=M4IV75_CALTB)

HSP 1 Score: 232 bits (591), Expect = 9.680e-72
Identity = 111/150 (74.00%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    4 TQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            T+ N G V+QIIGPVLD+ F +G LPKI+NA+ VKN ++II CEVQQLLGDN+VRAV+MS+T+GLKRG++VIDTG PISVPVG PTLGRIFN+LGEPVDNLG +   NTLPIHR AP FT+LET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    2 TKENFGSVTQIIGPVLDIEFKNGKLPKIFNALKVKNENNIITCEVQQLLGDNRVRAVAMSSTEGLKRGIQVIDTGQPISVPVGIPTLGRIFNVLGEPVDNLGIISSDNTLPIHRSAPTFTQLETKPSIFETGIKVVDLLAPYRRGGKIGL 151          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: B2XTA7_HETAK (ATP synthase subunit beta, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTA7_HETAK)

HSP 1 Score: 231 bits (589), Expect = 2.030e-71
Identity = 115/154 (74.68%), Postives = 126/154 (81.82%), Query Frame = 0
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVD-RTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            M  T  +IGY  QIIGPVLD+ FPSG LPKIYNA+ VK+    IVCEVQQLLGDN+VRAV+MS+TDGLKRG   +DTGAPISVPVG  TLGRIFN+LG PVD LGDVD  T TLPIHR AP FTELET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGL 154          
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: ATPB_PORPU (ATP synthase subunit beta, chloroplastic n=18 Tax=Eukaryota TaxID=2759 RepID=ATPB_PORPU)

HSP 1 Score: 231 bits (589), Expect = 2.080e-71
Identity = 112/153 (73.20%), Postives = 130/153 (84.97%), Query Frame = 0
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 153
            M +T  + G V+QIIGPVLD+ FP+G LPK++NA+ V++ D  I CEVQQLLGDNKVRAVSMS+T+GLKRGVEV+DTGAPISVPVG  TLGRIFN+LGEPVDNLG V   +TLPIHR AP FT+LET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MVSTTKSTGSVTQIIGPVLDIAFPNGQLPKVFNALKVQSTDGTITCEVQQLLGDNKVRAVSMSSTEGLKRGVEVVDTGAPISVPVGTNTLGRIFNVLGEPVDNLGPVSSESTLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYRRGGKIGL 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8M2_9STRA1.200e-109100.00ATPase beta subunit n=1 Tax=Tribonema minus TaxID=... [more]
B7T1R0_VAULI2.230e-7979.74ATP synthase subunit beta, chloroplastic n=1 Tax=V... [more]
A0A7S6U9Y1_9STRA7.660e-7878.29ATP synthase subunit beta, chloroplastic n=2 Tax=S... [more]
A0A7T7IGP2_9STRA2.160e-7778.43ATP synthase subunit beta n=1 Tax=Nematochrysopsis... [more]
A0A1X9PV05_9RHOD9.400e-7676.47ATP synthase subunit beta n=4 Tax=Compsopogonophyc... [more]
A0A7T7DA94_9STRA9.400e-7679.05ATP synthase subunit beta (Fragment) n=2 Tax=Tetra... [more]
C6KIS4_AURAN3.710e-7271.43ATP synthase subunit beta, chloroplastic n=3 Tax=P... [more]
M4IV75_CALTB9.680e-7274.00ATP synthase subunit beta, chloroplastic n=7 Tax=F... [more]
B2XTA7_HETAK2.030e-7174.68ATP synthase subunit beta, chloroplastic n=2 Tax=H... [more]
ATPB_PORPU2.080e-7173.20ATP synthase subunit beta, chloroplastic n=18 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainPFAMPF02874ATP-synt_ab_Ncoord: 11..78
e-value: 2.7E-23
score: 82.3
NoneNo IPR availableGENE3D2.40.10.170coord: 1..80
e-value: 1.3E-31
score: 110.4
NoneNo IPR availablePANTHERPTHR15184:SF58ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIALcoord: 1..152
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 1..152
NoneNo IPR availableCDDcd18115ATP-synt_F1_beta_Ncoord: 7..81
e-value: 2.8008E-38
score: 123.396
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 81..156
e-value: 3.5E-21
score: 77.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 82..153
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilySUPERFAMILY50615N-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 4..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:350427..350906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171498mRNA_10973Tribonema minus UTEX_B_3156 mRNAContig_82 350427..350906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|171498|e_gw1.82.95.1 ID=Trimin1|171498|e_gw1.82.95.1|Name=jgi.p|Trimin1|171498|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQ
LLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEP
VDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGM
AGVQQDVSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004100ATPase_F1/V1/A1_a/bsu_N
IPR027417P-loop_NTPase
IPR036121ATPase_F1/V1/A1_a/bsu_N_sf