mRNA_9758 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171250
Unique NamemRNA_9758
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A835YKG8_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG8_9STRA)

HSP 1 Score: 726 bits (1875), Expect = 1.660e-265
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1 
Query:    1 MPEEHSGIHVKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETAVSSPVLSPVSVKKTD 1020
            MPEEHSGIHVKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETAVSSPVLSPVSVKKTD
Sbjct:    1 MPEEHSGIHVKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETAVSSPVLSPVSVKKTD 340
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A835YYM0_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM0_9STRA)

HSP 1 Score: 594 bits (1532), Expect = 5.940e-213
Identity = 268/327 (81.96%), Postives = 297/327 (90.83%), Query Frame = 1 
Query:   28 VKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETAVSSPVLSPVSV 1008
            +KQR +TLNPI+L RDT  A  +H++EG  NWPMG YITLVHVAA++G+  VP ASW+T+L AF LWPI+GLGITGGVHRLWAHRSY+AHW+VRV+LMLINS+ANQGSIYHW+RDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHP VIAAGRTLDFSDLERDPVVMFQD+LDPWFALFMCFFFPGLVAK+GWG+NFWVGFWVAGALRYCWVLHCTW VNSAAHMFGDHPYD SWPAENP+VS+L+VGEGWHNWHHKYPFDYAASEFGV AQ+NPTKLFIDACA  GLV+KRKRA GAWEKLK+RRD AE   +    +PV +
Sbjct:   19 MKQRHMTLNPISLTRDTVAACRHHWREGTFNWPMGIYITLVHVAAIIGVMNVPAASWKTQLLAFALWPISGLGITGGVHRLWAHRSYEAHWSVRVFLMLINSIANQGSIYHWSRDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPEVIAAGRTLDFSDLERDPVVMFQDRLDPWFALFMCFFFPGLVAKYGWGENFWVGFWVAGALRYCWVLHCTWCVNSAAHMFGDHPYDNSWPAENPVVSILAVGEGWHNWHHKYPFDYAASEFGVAAQFNPTKLFIDACANVGLVSKRKRATGAWEKLKERRDEAEDGSADGSAAPVKL 345
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A6H5JQI0_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQI0_9PHAE)

HSP 1 Score: 523 bits (1348), Expect = 2.990e-185
Identity = 239/324 (73.77%), Postives = 269/324 (83.02%), Query Frame = 1 
Query:    1 MPEEHSGIHVKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYD-ASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAE 969
            M  + S + ++ R LTLNP TL +DT E V YH+K  +INWPM  YITLVH+AAV+G C +    WQT L AF+LWPITGLGITGGVHRLWAHRSYDAHW+VRV++MLINSMANQGSIYHW+RDHRVHHK+SETDADPHNA+RGFFFAHMGWLYVKKHP VI AGRTL ++DLE DP+VMFQD LDPWFALFMCF  P +VA  GWG++FW GFWVAGALRY  VLH TW VNSAAHMFGDHPYD  SWP+ENP VS+ ++GEGWHNWHHKYPFDYAASEFGV  Q+NPTK+ ID  A  GLVT RKRA GAW KLK+RRD  E
Sbjct:    1 MASDASDVLLEGRSLTLNPFTLIKDTVETVVYHWKNKSINWPMAIYITLVHMAAVLGFCTIQDCKWQTCLLAFVLWPITGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSLDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKERRDNEE 324
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A7S2UX82_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX82_9STRA)

HSP 1 Score: 478 bits (1230), Expect = 1.110e-167
Identity = 218/297 (73.40%), Postives = 246/297 (82.83%), Query Frame = 1 
Query:   70 RDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDA-SWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRR 957
            ++  +   YHYKEGN+NWPM  YITLVHVAA VG+  VP  +WQT LWAFILWPI+G GITGGVHRLW+HRSY A    R  +ML NS+ANQGSIYHW+RDHRVHHKHSETDADPHNA RGFFFAHMGWL VKKHP VI AG+ LDFSDL  DPVV+FQ + DPWFALFMCF  PGLV    WGDNFW G+WVAGALRY +VLHCTW+VNSAAH++GDHPYD  SWPAENP+VS  ++GEGWHNWHHKYPFDYAASE+G+ AQ+NPTK+ ID CA  G V++RKRA GAWEKLK RR
Sbjct:    7 KNALDTCVYHYKEGNVNWPMVVYITLVHVAACVGIWTVPKCTWQTLLWAFILWPISGFGITGGVHRLWSHRSYKARLPYRFVVMLANSIANQGSIYHWSRDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVIKAGKELDFSDLLADPVVVFQKRTDPWFALFMCFVLPGLVCTL-WGDNFWNGYWVAGALRYVYVLHCTWLVNSAAHLYGDHPYDPKSWPAENPMVSYAALGEGWHNWHHKYPFDYAASEYGLMAQFNPTKVLIDVCAMVGQVSQRKRATGAWEKLKDRR 302
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A7S3UXY6_HETAK (Hypothetical protein n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXY6_HETAK)

HSP 1 Score: 470 bits (1210), Expect = 1.570e-164
Identity = 214/309 (69.26%), Postives = 247/309 (79.94%), Query Frame = 1 
Query:   58 ITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDA-SWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETAVS 981
            + L +D+     YH K GN+NWPM  YI LVHVA   GL  +  + WQT LWAF LWPI+G GITGGVHRLW+HRSY A++  R + ML NS+ANQGSIYHWARDHRVHHKHSETDADPHNA RGFFFAHMGWL VKKHP V+ AGR LDFSDL+ D  VMFQ KLDPWF LFMCF FP LV  +GWG++FW GF+VAGA+RY +VLH TW+VNSAAH++GDHPYD  SWPAENP VSL ++GEGWHNWHHKYPFDY+ASEFGV +Q+NPTK+ ID  AA G+VT RKRA GAW KLK++RD  E  +S
Sbjct:    4 VGLIKDSVTTSVYHLKHGNVNWPMLIYIALVHVAGFYGLMLITSSQWQTLLWAFTLWPISGFGITGGVHRLWSHRSYKANFIFRFFTMLANSIANQGSIYHWARDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVVKAGRELDFSDLDADWTVMFQKKLDPWFTLFMCFVFPALVGTYGWGEDFWTGFYVAGAVRYIYVLHVTWLVNSAAHLYGDHPYDPQSWPAENPFVSLGALGEGWHNWHHKYPFDYSASEFGVSSQFNPTKMIIDLAAACGMVTDRKRANGAWGKLKEKRDREEPELS 312
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A7S2C5X7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5X7_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 5.660e-161
Identity = 211/299 (70.57%), Postives = 242/299 (80.94%), Query Frame = 1 
Query:   82 EAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYD-ASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETA 975
            EA   HYK GN NWPM  Y+  VH  A++G   V    W+T +WA+ILWPI+GLGIT GVHRLWAHRSY+AHWTVR +LML NS+ANQGSIYHWARDHRVHHKHSET+ADPHNA RGFF+AH+GWL +KKH  V+AAGR LDFSDL  D  VMFQ +LDPWF LFM + FPG VA++ WG+ FW   WVAGALRYC VLH TW VNSAAH++GDHPYD +SWP+ENP VSL ++GEGWHNWHHKYPFDYAASEFG+G Q+NPTKLFID+ A  GLVTKRKRA GAW KLK++R    TA
Sbjct:   45 EATVRHYKAGNFNWPMIIYMAFVHYTAILGCLAVTSVKWETLMWAYILWPISGLGITAGVHRLWAHRSYNAHWTVRCWLMLANSIANQGSIYHWARDHRVHHKHSETNADPHNATRGFFYAHVGWLLIKKHKDVVAAGRLLDFSDLHEDGFVMFQKRLDPWFTLFMSYLFPGYVAQYCWGEAFWPAVWVAGALRYCCVLHFTWCVNSAAHIWGDHPYDPSSWPSENPFVSLGAIGEGWHNWHHKYPFDYAASEFGIGRQFNPTKLFIDSLAVVGLVTKRKRATGAWTKLKEKRIAEITA 343
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A4D9CQB7_9STRA (FA_desaturase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQB7_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 1.050e-160
Identity = 210/299 (70.23%), Postives = 240/299 (80.27%), Query Frame = 1 
Query:   64 LARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDAS-WPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRR 957
            LARD   A+ YHYKEGN+NWPM  Y+ L H+AA +GL  +P   WQT L AFILWPITGLGIT GVHRLWAHRSY A    R+ LML NS+ANQGSIYHW+RDHRVHHK+SETDADPHNA RGFFFAHMGWL VKKHP V+  G+ LDFSDL  DPVV FQ   DPWFA FMCF  P LVA++ WG+ FW  FWVAG LRYC VLH TWMVNSAAH++GDHPYD + WPAENPLVS++++GEGWHNWHH+YP+DYAASEFG+  Q+NPTK FID  AA G+V+ RKRA GAW KL++ R
Sbjct:    5 LARDAVSALVYHYKEGNLNWPMIIYLVLAHLAAYMGLVSIPSCKWQTLLEAFILWPITGLGITAGVHRLWAHRSYTATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVARYFWGEAFWNAFWVAGGLRYCLVLHFTWMVNSAAHLYGDHPYDPTIWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISRQFNPTKAFIDFFAAIGMVSNRKRATGAWAKLRESR 303
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A7S2B0V8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0V8_9STRA)

HSP 1 Score: 460 bits (1183), Expect = 5.660e-160
Identity = 211/300 (70.33%), Postives = 242/300 (80.67%), Query Frame = 1 
Query:   73 DTAEAV---AYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDAS-WPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRD 960
            DT E +     HYKEGNINWPM  YIT VHV A +GL  +P ASW+T LWAFILWPI+GLGITGG HRLWAHRSY AHW+VR +LML NS+ANQG+I+HWARDHRVHHKH+ET ADPHNA RGFF+AH+GWL VKK  AV+ AGR LDFSDL+ D  VMFQ +LDPWF LFM + FPG VA++ WG  FW   W+AGALRYC VLH TW+VNSAAH++GDHPY+ S W AENP VSL S+GEGWHNWHHKYPFDYAASEFG+  Q+NPTKLF+D CA  GLV  RKRA GAW +LK +R+
Sbjct:   21 DTVECIQTCVRHYKEGNINWPMVIYITFVHVTAFMGLVRIPEASWKTLLWAFILWPISGLGITGGAHRLWAHRSYTAHWSVRCFLMLANSIANQGTIFHWARDHRVHHKHTETTADPHNATRGFFYAHVGWLLVKKDKAVVEAGRKLDFSDLKADGFVMFQKRLDPWFTLFMSYLFPGYVARYCWGAEFWSCVWIAGALRYCAVLHFTWLVNSAAHIYGDHPYNPSCWTAENPFVSLCSLGEGWHNWHHKYPFDYAASEFGIDRQFNPTKLFLDGCAKLGLVYDRKRAVGAWTRLKLKRN 320
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: A0A7S2DXG6_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DXG6_9STRA)

HSP 1 Score: 459 bits (1180), Expect = 3.650e-159
Identity = 215/303 (70.96%), Postives = 242/303 (79.87%), Query Frame = 1 
Query:   70 RDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDA-SWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRDTAETA 975
            RD    V+YHYKEGNINWPMG YITLVHV AVVGL  VP  S +T LWAF+LWPI+G GIT GVHRLW+HRSY+A + VR++LML NS+ANQGSI+HWARDHRVHHK+SETDADPHNA RGFFFAHMGWLYV+KHP V+ AGR LDFSDL  D +VMFQ KLDPWF L+MCF  P  VA   WG+ FW  F+VAG LRY  VLH TW+VNSAAH++GDHPYD  S+PAENP+VS  SVGEGWHNWHHKYPFDYAASEFG+ +Q+NP+KLFID  AA GLV  RKR   AW   K RRD    A
Sbjct:   46 RDIPSLVSYHYKEGNINWPMGIYITLVHVVAVVGLFTVPKCSAETLLWAFVLWPISGFGITVGVHRLWSHRSYEASFVVRLFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLYVRKHPDVVKAGRELDFSDLYEDSLVMFQKKLDPWFTLYMCFVMPAQVAAAFWGEEFWNAFFVAGCLRYAVVLHFTWLVNSAAHLYGDHPYDVLSYPAENPIVSFCSVGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMLAAVGLVWGRKRGTAAWAMGKARRDRDRAA 348
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BLAST of jgi.p|Trimin1|171250 vs. uniprot
Match: F0YLN3_AURAN (FA_desaturase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLN3_AURAN)

HSP 1 Score: 453 bits (1165), Expect = 6.210e-158
Identity = 209/278 (75.18%), Postives = 227/278 (81.65%), Query Frame = 1 
Query:  127 MGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDASWPAENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAGLVTKRKRAAGAWEKLKQRRD 960
            MG YI+L H  AV+GL  V      T LWA+ILWPITGLGIT GVHRLW+HRSY+A   VR  LML NS+ANQGSIYHWARDHRVHHKHSETDADPHNA RGFFFAHMGWLYVKKHP ++  G+ LDFSDL RD  VMFQ  LDPWF LFMCF FP LVAKFGWG+NFW  FWVAGALRY  VLHCTW+VNSAAH FGDHPYD  WPAENP VSL S+GEGWHNWHHKYP+DYAASEFG+G+Q+NPTKLFID  AA GLV  RKRA  AWE+ K +RD
Sbjct:    1 MGIYISLCHYWAVIGLFRVTSCMLPTLLWAYILWPITGLGITAGVHRLWSHRSYEAGKVVRCTLMLFNSIANQGSIYHWARDHRVHHKHSETDADPHNATRGFFFAHMGWLYVKKHPDIMVEGKKLDFSDLSRDGFVMFQKHLDPWFTLFMCFVFPALVAKFGWGENFWNAFWVAGALRYVVVLHCTWLVNSAAHFFGDHPYDDQWPAENPFVSLASIGEGWHNWHHKYPYDYAASEFGIGSQFNPTKLFIDGAAALGLVWNRKRATSAWERSKVKRD 278
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171250 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKG8_9STRA1.660e-265100.00Stearoyl-CoA desaturase n=1 Tax=Tribonema minus Ta... [more]
A0A835YYM0_9STRA5.940e-21381.96Stearoyl-CoA desaturase n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JQI0_9PHAE2.990e-18573.77FA_desaturase domain-containing protein n=2 Tax=Ec... [more]
A0A7S2UX82_9STRA1.110e-16773.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UXY6_HETAK1.570e-16469.26Hypothetical protein n=6 Tax=Heterosigma akashiwo ... [more]
A0A7S2C5X7_9STRA5.660e-16170.57Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A4D9CQB7_9STRA1.050e-16070.23FA_desaturase domain-containing protein n=3 Tax=Mo... [more]
A0A7S2B0V8_9STRA5.660e-16070.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2DXG6_9STRA3.650e-15970.96Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]
F0YLN3_AURAN6.210e-15875.18FA_desaturase domain-containing protein n=1 Tax=Au... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_81contigContig_81:233868..235227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171250|e_gw1.81.13.1
BRITEko00000,ko00001,ko01000,ko01004,ko03016,ko04131
KEGG rclassRC00917
KEGG ReactionR02222
KEGG Pathwayko01040,ko01212,ko03320,ko04152,ko04212,ko04341,map01040,map01212,map03320,map04152,map04212,map04341
KEGG koko:K00507,ko:K06227,ko:K15331,ko:K20641
EC1.14.19.1,2.1.1.35
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0001101,GO:0001676,GO:0002376,GO:0003674,GO:0003824,GO:0004768,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006723,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0007049,GO:0007154,GO:0007272,GO:0007275,GO:0007399,GO:0007584,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0008150,GO:0008152,GO:0008202,GO:0008361,GO:0008366,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009605,GO:0009607,GO:0009617,GO:0009743,GO:0009744,GO:0009889,GO:0009893,GO:0009894,GO:0009987,GO:0009991,GO:0010033,GO:0010506,GO:0010817,GO:0010872,GO:0010873,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016215,GO:0016491,GO:0016705,GO:0016717,GO:0018130,GO:0019098,GO:0019216,GO:0019218,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019748,GO:0019752,GO:0019953,GO:0022402,GO:0022414,GO:0030104,GO:0030154,GO:0030176,GO:0030258,GO:0031224,GO:0031227,GO:0031323,GO:0031325,GO:0031329,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032787,GO:0032896,GO:0033500,GO:0033559,GO:0033561,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034285,GO:0034433,GO:0034434,GO:0034435,GO:0034641,GO:0034654,GO:0035337,GO:0035383,GO:0035384,GO:0040008,GO:0040014,GO:0040018,GO:0042175,GO:0042221,GO:0042335,GO:0042445,GO:0042446,GO:0042552,GO:0042592,GO:0042593,GO:0042594,GO:0042742,GO:0042759,GO:0042810,GO:0042811,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043588,GO:0043603,GO:0043604,GO:0043900,GO:0043901,GO:0043903,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0045087,GO:0045444,GO:0045540,GO:0045570,GO:0045572,GO:0045793,GO:0045834,GO:0045926,GO:0045927,GO:0045940,GO:0046390,GO:0046394,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046872,GO:0046890,GO:0046914,GO:0046949,GO:0048047,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048732,GO:0048733,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050830,GO:0050872,GO:0050873,GO:0050878,GO:0050891,GO:0050896,GO:0051094,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051301,GO:0051704,GO:0051707,GO:0051716,GO:0055086,GO:0055088,GO:0055090,GO:0055114,GO:0060179,GO:0061640,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070542,GO:0070887,GO:0071496,GO:0071616,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0080090,GO:0090066,GO:0090181,GO:0090407,GO:0097708,GO:0098542,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901700,GO:1902930,GO:1903047,GO:1903699,GO:1903964,GO:1903966,GO:2000026
Preferred nameSCD5
Descriptionoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
COG categoryI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1398@1|root,KOG1600@2759|Eukaryota
Evalue6.76e-185
Seed ortholog2880.D8LSZ1
Hectar predicted targeting categoryother localisation
TranscriptId171572
TrackFilteredModels1
ProteinId171250
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171250gene_9758Tribonema minus UTEX_B_3156 geneContig_81 233868..235227 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171250Trimin1|171250|e_gw1.81.13.1Tribonema minus UTEX_B_3156 polypeptideContig_81 233868..235227 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9758_2exon_9758_2Tribonema minus UTEX_B_3156 exonContig_81 233868..234654 -
exon_9758_1exon_9758_1Tribonema minus UTEX_B_3156 exonContig_81 234992..235227 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9758CDS_9758Tribonema minus UTEX_B_3156 CDSContig_81 234992..235227 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9758 ID=mRNA_9758|Name=jgi.p|Trimin1|171250|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1023bp|location=Sequence derived from alignment at Contig_81:233868..235227- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGAGGAGCACTCCGGAATCCATGTGAAACAGCGTTTCTTGACATT
GAACCCGATCACCTTGGCAAGAGACACAGCTGAGGCAGTAGCGTACCACT
ACAAGGAGGGGAATATCAACTGGCCCATGGGCGCCTACATCACGCTGGTG
CATGTGGCGGCCGTCGTTGGTCTCTGCTACGTCCCGGTCGCGTCATGGCA
GACACGACTTTGGGCCTTCATCCTCTGGCCCATAACCGGGCTGGGCATCA
CCGGCGGCGTCCACCGCCTCTGGGCACACCGCTCCTACGACGCGCACTGG
ACCGTGCGCGTGTACCTCATGCTCATCAACTCCATGGCCAACCAGGGCTC
CATCTACCACTGGGCGCGCGACCACCGCGTCCACCACAAGCACTCGGAAA
CCGACGCCGACCCGCACAACGCGCAGCGCGGCTTCTTCTTCGCGCACATG
GGCTGGCTCTACGTCAAGAAGCACCCCGCCGTCATCGCCGCGGGGCGCAC
GCTCGACTTCAGCGACCTTGAACGCGACCCCGTTGTCATGTTCCAGGACA
AGCTCGACCCATGGTTCGCGCTCTTCATGTGCTTCTTCTTCCCCGGCCTC
GTCGCCAAGTTCGGCTGGGGCGACAACTTCTGGGTCGGGTTCTGGGTCGC
GGGCGCGCTGCGCTACTGCTGGGTCCTCCACTGCACGTGGATGGTCAACT
CCGCGGCTCACATGTTCGGCGACCACCCGTACGACGCCTCGTGGCCCGCG
GAGAACCCCCTGGTGAGCCTGCTGAGCGTTGGCGAGGGGTGGCACAACTG
GCACCACAAGTACCCCTTTGACTACGCCGCGAGCGAGTTTGGCGTGGGGG
CGCAGTACAACCCCACCAAGCTCTTCATCGACGCGTGCGCGGCGGCGGGG
CTTGTCACCAAACGCAAGCGCGCCGCCGGCGCGTGGGAGAAGCTCAAGCA
GCGGCGAGACACGGCGGAGACGGCGGTGTCGTCGCCCGTGTTGTCGCCGG
TGTCGGTAAAGAAGACGGATTGA
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protein sequence of jgi.p|Trimin1|171250

>Trimin1|171250|e_gw1.81.13.1 ID=Trimin1|171250|e_gw1.81.13.1|Name=jgi.p|Trimin1|171250|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=341bp
MPEEHSGIHVKQRFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLV
HVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHW
TVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHM
GWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGL
VAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYDASWPA
ENPLVSLLSVGEGWHNWHHKYPFDYAASEFGVGAQYNPTKLFIDACAAAG
LVTKRKRAAGAWEKLKQRRDTAETAVSSPVLSPVSVKKTD*
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mRNA from alignment at Contig_81:233868..235227-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9758 ID=mRNA_9758|Name=jgi.p|Trimin1|171250|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1360bp|location=Sequence derived from alignment at Contig_81:233868..235227- (Tribonema minus UTEX_B_3156 )
ATGCCCGAGGAGCACTCCGGAATCCATGTGAAACAGCGTTTCTTGACATT
GAACCCGATCACCTTGGCAAGAGACACAGCTGAGGCAGTAGCGTACCACT
ACAAGGAGGGGAATATCAACTGGCCCATGGGCGCCTACATCACGCTGGTG
CATGTGGCGGCCGTCGTTGGTCTCTGCTACGTCCCGGTCGCGTCATGGCA
GACACGACTTTGGGCCTTCATCCTCTGGCCCATAACGTGAGTTTGATTTA
CCTCTGTCATTCAGCTTGTCGTGTGCATCATCGTCGGACCTTGCTGCTTC
CTGCCTGCCACGACTTGCAGCTCAATCAGCTCCGACATTGTTCCGTTGCA
CTCTTTTGGAATTGAATCAGGCATAATGCAAGTTCGAGCCACCACCTGTG
TCTGTCGCGGTGTAGCACCACGTGCTTGTCATTCAACCCTCACTCTGCTG
GACGTGACCTGTCTTCCATCGCAACTCCCAGCGCACTCTCCCTTGCTCAT
GCATCGTCAAACGCACACACTTCCCCTGTACTGTTGTACTCACCACCATT
TTCTCTCCCCCTTTTTACAACAGCGGGCTGGGCATCACCGGCGGCGTCCA
CCGCCTCTGGGCACACCGCTCCTACGACGCGCACTGGACCGTGCGCGTGT
ACCTCATGCTCATCAACTCCATGGCCAACCAGGGCTCCATCTACCACTGG
GCGCGCGACCACCGCGTCCACCACAAGCACTCGGAAACCGACGCCGACCC
GCACAACGCGCAGCGCGGCTTCTTCTTCGCGCACATGGGCTGGCTCTACG
TCAAGAAGCACCCCGCCGTCATCGCCGCGGGGCGCACGCTCGACTTCAGC
GACCTTGAACGCGACCCCGTTGTCATGTTCCAGGACAAGCTCGACCCATG
GTTCGCGCTCTTCATGTGCTTCTTCTTCCCCGGCCTCGTCGCCAAGTTCG
GCTGGGGCGACAACTTCTGGGTCGGGTTCTGGGTCGCGGGCGCGCTGCGC
TACTGCTGGGTCCTCCACTGCACGTGGATGGTCAACTCCGCGGCTCACAT
GTTCGGCGACCACCCGTACGACGCCTCGTGGCCCGCGGAGAACCCCCTGG
TGAGCCTGCTGAGCGTTGGCGAGGGGTGGCACAACTGGCACCACAAGTAC
CCCTTTGACTACGCCGCGAGCGAGTTTGGCGTGGGGGCGCAGTACAACCC
CACCAAGCTCTTCATCGACGCGTGCGCGGCGGCGGGGCTTGTCACCAAAC
GCAAGCGCGCCGCCGGCGCGTGGGAGAAGCTCAAGCAGCGGCGAGACACG
GCGGAGACGGCGGTGTCGTCGCCCGTGTTGTCGCCGGTGTCGGTAAAGAA
GACGGATTGA
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Coding sequence (CDS) from alignment at Contig_81:233868..235227-

>mRNA_9758 ID=mRNA_9758|Name=jgi.p|Trimin1|171250|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1023bp|location=Sequence derived from alignment at Contig_81:233868..235227- (Tribonema minus UTEX_B_3156 )
ATGCCCGAGGAGCACTCCGGAATCCATGTGAAACAGCGTTTCTTGACATT
GAACCCGATCACCTTGGCAAGAGACACAGCTGAGGCAGTAGCGTACCACT
ACAAGGAGGGGAATATCAACTGGCCCATGGGCGCCTACATCACGCTGGTG
CATGTGGCGGCCGTCGTTGGTCTCTGCTACGTCCCGGTCGCGTCATGGCA
GACACGACTTTGGGCCTTCATCCTCTGGCCCATAACCGGGCTGGGCATCA
CCGGCGGCGTCCACCGCCTCTGGGCACACCGCTCCTACGACGCGCACTGG
ACCGTGCGCGTGTACCTCATGCTCATCAACTCCATGGCCAACCAGGGCTC
CATCTACCACTGGGCGCGCGACCACCGCGTCCACCACAAGCACTCGGAAA
CCGACGCCGACCCGCACAACGCGCAGCGCGGCTTCTTCTTCGCGCACATG
GGCTGGCTCTACGTCAAGAAGCACCCCGCCGTCATCGCCGCGGGGCGCAC
GCTCGACTTCAGCGACCTTGAACGCGACCCCGTTGTCATGTTCCAGGACA
AGCTCGACCCATGGTTCGCGCTCTTCATGTGCTTCTTCTTCCCCGGCCTC
GTCGCCAAGTTCGGCTGGGGCGACAACTTCTGGGTCGGGTTCTGGGTCGC
GGGCGCGCTGCGCTACTGCTGGGTCCTCCACTGCACGTGGATGGTCAACT
CCGCGGCTCACATGTTCGGCGACCACCCGTACGACGCCTCGTGGCCCGCG
GAGAACCCCCTGGTGAGCCTGCTGAGCGTTGGCGAGGGGTGGCACAACTG
GCACCACAAGTACCCCTTTGACTACGCCGCGAGCGAGTTTGGCGTGGGGG
CGCAGTACAACCCCACCAAGCTCTTCATCGACGCGTGCGCGGCGGCGGGG
CTTGTCACCAAACGCAAGCGCGCCGCCGGCGCGTGGGAGAAGCTCAAGCA
GCGGCGAGACACGGCGGAGACGGCGGTGTCGTCGCCCGTGTTGTCGCCGG
TGTCGGTAAAGAAGACGGATTGA
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