Trimin1|171204|e_gw1.80.86.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|171204
Unique NameTrimin1|171204|e_gw1.80.86.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length173
Homology
BLAST of jgi.p|Trimin1|171204 vs. uniprot
Match: A0A835YKZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ5_9STRA)

HSP 1 Score: 345 bits (885), Expect = 3.480e-120
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 MDVIPPQLPPRTLRESVNEAVLRDLLERGQDVLRAIAAKSPNPKHQNRDLVGILKKYRARKQHQDRSRSVKYSFAAERSERRLSVDGIVTMQGIDRPVRHSMGYGEYGDLVDQINAHPTICSQALHKLGRECPFLDLYVAERETWLQAITAECGIDRDGAKGVMLRAMYGGNP 173
            MDVIPPQLPPRTLRESVNEAVLRDLLERGQDVLRAIAAKSPNPKHQNRDLVGILKKYRARKQHQDRSRSVKYSFAAERSERRLSVDGIVTMQGIDRPVRHSMGYGEYGDLVDQINAHPTICSQALHKLGRECPFLDLYVAERETWLQAITAECGIDRDGAKGVMLRAMYGGNP
Sbjct:    1 MDVIPPQLPPRTLRESVNEAVLRDLLERGQDVLRAIAAKSPNPKHQNRDLVGILKKYRARKQHQDRSRSVKYSFAAERSERRLSVDGIVTMQGIDRPVRHSMGYGEYGDLVDQINAHPTICSQALHKLGRECPFLDLYVAERETWLQAITAECGIDRDGAKGVMLRAMYGGNP 173          
BLAST of jgi.p|Trimin1|171204 vs. uniprot
Match: A0A835YMS4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.250e-21
Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 0
Query:   89 VTMQGIDRPVRHSMGYGEYGDLVDQINAHPTICSQALHKLGRECPFLDLYVAERETWLQAITAECGIDRDGAKGVMLRAMYGG 171
            VT+QG+DRP+RH++ +G   D VD +N  PT+ SQAL + GRECP L  YV+ R++ L+ +  + G++RD AK V LRAMYGG
Sbjct:    1 VTLQGVDRPIRHALSHGRLRD-VDVVNCQPTLLSQALQRCGRECPALLEYVSARDSKLKELVEQYGLERDDAKNVFLRAMYGG 82          
BLAST of jgi.p|Trimin1|171204 vs. uniprot
Match: A0A2J7ZNB7_9CHLO (Putative helicase n=3 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZNB7_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 1.600e-7
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0
Query:   91 MQGIDRPVRHSMGYGEYGDLVDQINAHPTICSQALHKLGRECPFLDLYVAERETWLQAITAECGIDRDGAKGVMLRAMYGGNP 173
            M G+ R VR  +G   Y D VD +N+ PT+C Q          +L  YV +R + L+ +     +DRD AKG+ LR M+GG+P
Sbjct:    1 MSGMRREVRACLGSELYHD-VDMVNSQPTLCLQYFSARSLPTTYLGEYVRDRASRLREVQEAMRVDRDAAKGLFLRLMFGGSP 82          
BLAST of jgi.p|Trimin1|171204 vs. uniprot
Match: A0A250XQS3_9CHLO (DUF5906 domain-containing protein (Fragment) n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XQS3_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 9.450e-7
Identity = 31/85 (36.47%), Postives = 44/85 (51.76%), Query Frame = 0
Query:   88 IVTMQGIDRPVRHSMGYGEYGDLVDQINAHPTICSQALHKLGRECPFLDLYVAERETWLQAITAECGIDRDGAKGVMLRAMYGGN 172
            IV    + R VR ++    Y D VD +N  P +  Q L   G  C  L  YV +R+  L  +   CG+DRD AK + +R +YGG+
Sbjct:  163 IVPFVYMPREVRATLAADRYVD-VDVVNCQPVLLRQRLENAGFACECLAQYVDDRDACLSRVMKACGVDRDAAKQLFVRMVYGGS 246          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171204 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YKZ5_9STRA3.480e-120100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YMS4_9STRA2.250e-2151.81Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2J7ZNB7_9CHLO1.600e-738.55Putative helicase n=3 Tax=Tetrabaena socialis TaxI... [more]
A0A250XQS3_9CHLO9.450e-736.47DUF5906 domain-containing protein (Fragment) n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_80contigContig_80:579163..579681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171204mRNA_11768Tribonema minus UTEX_B_3156 mRNAContig_80 579163..579681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|171204|e_gw1.80.86.1 ID=Trimin1|171204|e_gw1.80.86.1|Name=jgi.p|Trimin1|171204|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=173bp
MDVIPPQLPPRTLRESVNEAVLRDLLERGQDVLRAIAAKSPNPKHQNRDL
VGILKKYRARKQHQDRSRSVKYSFAAERSERRLSVDGIVTMQGIDRPVRH
SMGYGEYGDLVDQINAHPTICSQALHKLGRECPFLDLYVAERETWLQAIT
AECGIDRDGAKGVMLRAMYGGNP
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