Trimin1|140759|gw1.8.156.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|140759
Unique NameTrimin1|140759|gw1.8.156.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length66
Homology
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0A835YKZ6_9STRA (CRC domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ6_9STRA)

HSP 1 Score: 139 bits (350), Expect = 5.390e-42
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    1 EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK
Sbjct:    1 EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: D8LP28_ECTSI (TSO1 transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP28_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.980e-13
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            E    DGC CK+SKCLK+YCQCFA Q +C+  C+C  C+N A     R Q +  +L R P AFDAK
Sbjct:   19 EAPTTDGCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNANQESMRLQAINGVLERNPAAFDAK 84          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0A2V3IYW8_9FLOR (Protein tesmin/TSO1-like CXC 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYW8_9FLOR)

HSP 1 Score: 72.0 bits (175), Expect = 3.590e-13
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            EQ    GC CK SKCLK+YC+CFA  + C   C+CR C N   F EE+   +ES+L R P+AF  K
Sbjct:  117 EQRLEKGCNCKNSKCLKLYCECFAKGRTCGPHCNCRNCRNNGQFPEEKQAAVESILERNPNAFQPK 182          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0A078A518_STYLE (CRC domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A518_STYLE)

HSP 1 Score: 72.0 bits (175), Expect = 3.680e-13
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    7 GCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
             C CK+SKCLK+YC+CFA  K C   CSC GC N A   EER Q  E +LMR P AF  K
Sbjct:  370 ACNCKRSKCLKLYCECFANNKFCGANCSCNGCSNHAEHDEERLQAKEQILMRNPLAFRPK 429          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0A6H5JPL0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL0_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.720e-13
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            E    DGC CK+SKCLK+YCQCFA Q +C+  C+C  C+N +     R Q +  +L R P AFDAK
Sbjct:  373 ESPTTDGCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNSNQESMRLQAINGVLERNPAAFDAK 438          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0A7S2Y884_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y884_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.410e-13
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            ++V   GC CKK++CLK+YCQCFA Q  C   C C  CHN  +  + R + +  +L R PHAFD K
Sbjct:   43 QEVLHMGCTCKKTRCLKLYCQCFALQLYCGPNCRCMTCHNVVSQEKARQEAIRLILGRNPHAFDTK 108          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0A7S1UZB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZB4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.090e-13
Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    7 GCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFD 64
            GC CKKSKCLK+YCQCFA   MC   C C  CHNTA   + R + + S+L R P AFD
Sbjct:  279 GCTCKKSKCLKLYCQCFATSIMCGQNCRCLVCHNTALHEDARKEAVRSILQRNPTAFD 336          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0E6U2_PARTE (CRC domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E6U2_PARTE)

HSP 1 Score: 68.6 bits (166), Expect = 1.670e-12
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    8 CKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            C CKKSKCLK+YC CFAA K+CS  C+C GC N ++   ER Q +E ++ R P AF+ K
Sbjct:   85 CNCKKSKCLKLYCDCFAAGKLCSSKCNCCGCFNNSSNLLERNQFIEKMVERNPEAFNQK 143          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: J9I7X2_9SPIT (Tso1, putative n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I7X2_9SPIT)

HSP 1 Score: 70.1 bits (170), Expect = 1.760e-12
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    4 AVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            ++  C CKKSKCLK+YC+CFA  K C   C+C GC N A   +ER    E +LMR P AF  K
Sbjct:  447 SIKSCNCKKSKCLKLYCECFANNKFCGANCACNGCSNHAEHDDERLHAKEQILMRNPLAFRPK 509          
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Match: A0A7S0C865_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C865_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.980e-12
Identity = 33/60 (55.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    7 GCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQVMESLLMRKPHAFDAK 66
            GC CKKSKCLK+YCQCFAA  MCS  C C  C NT      R   ++S+L R P AF+ K
Sbjct:   22 GCTCKKSKCLKLYCQCFAASVMCSGNCRCLVCMNTPEHEMARRDAIKSILGRNPAAFETK 81          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|140759 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKZ6_9STRA5.390e-42100.00CRC domain-containing protein (Fragment) n=1 Tax=T... [more]
D8LP28_ECTSI1.980e-1351.52TSO1 transcription factor (Partial) (Fragment) n=1... [more]
A0A2V3IYW8_9FLOR3.590e-1350.00Protein tesmin/TSO1-like CXC 6 n=1 Tax=Gracilariop... [more]
A0A078A518_STYLE3.680e-1356.67CRC domain-containing protein n=1 Tax=Stylonychia ... [more]
A0A6H5JPL0_9PHAE3.720e-1350.00CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2Y884_9STRA4.410e-1346.97Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S1UZB4_9STRA5.090e-1356.90Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0E6U2_PARTE1.670e-1254.24CRC domain-containing protein n=1 Tax=Paramecium t... [more]
J9I7X2_9SPIT1.760e-1250.79Tso1, putative n=1 Tax=Oxytricha trifallax TaxID=1... [more]
A0A7S0C865_9STRA1.980e-1255.00Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 3..44
e-value: 3.5E-11
score: 53.2
IPR005172CRC domainPFAMPF03638TCRcoord: 6..41
e-value: 7.8E-12
score: 45.3
IPR005172CRC domainPROSITEPS51634CRCcoord: 4..66
score: 15.254866
NoneNo IPR availablePANTHERPTHR12446:SF34PROTEIN LIN-54 HOMOLOGcoord: 7..66
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 7..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:1746954..1747970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|140759mRNA_2897Tribonema minus UTEX_B_3156 mRNAContig_8 1746954..1747970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|140759|gw1.8.156.1 ID=Trimin1|140759|gw1.8.156.1|Name=jgi.p|Trimin1|140759|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=66bp
EQVAVDGCKCKKSKCLKMYCQCFAAQKMCSCFCSCRGCHNTAAFAEERAQ
VMESLLMRKPHAFDAK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam