mRNA_2791 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|91923
Unique NamemRNA_2791
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A836C969_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C969_9STRA)

HSP 1 Score: 679 bits (1752), Expect = 3.180e-236
Identity = 610/610 (100.00%), Postives = 610/610 (100.00%), Query Frame = 1 
Query:  172 MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITYVDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLSDFFAGLASXXXXXXXXXXXXTASSTPAAVDPVAAAQAFMXXXXXXXXXXXXXASGSAARGSGGSFHDLVRNVMRNAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPPTASIFDSATPLLIALDAAAATFGTAXXXXXXXXXXXXXXXXDADEYDIVGPPSPAAAXXXXXXXXXEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGMTAVLNDLLSD 2001
            MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITYVDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLSDFFAGLASXXXXXXXXXXXXTASSTPAAVDPVAAAQAFMXXXXXXXXXXXXXASGSAARGSGGSFHDLVRNVMRNAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPPTASIFDSATPLLIALDAAAATFGTAXXXXXXXXXXXXXXXXDADEYDIVGPPSPAAAXXXXXXXXXEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGMTAVLNDLLSD
Sbjct:    1 MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITYVDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLSDFFAGLASXXXXXXXXXXXXTASSTPAAVDPVAAAQAFMXXXXXXXXXXXXXASGSAARGSGGSFHDLVRNVMRNAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPPTASIFDSATPLLIALDAAAATFGTAXXXXXXXXXXXXXXXXDADEYDIVGPPSPAAAXXXXXXXXXEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGMTAVLNDLLSD 610
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BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A6H5JI15_9PHAE (ZZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI15_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 4.560e-11
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  937 VHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAG--GAAAEFSPYLKIPTPAQAPAVLVCVLR 1128
            VH GV+CD C VCPI G RYK +V AD+DLC  CE    G  + F P+LKI TP QAPA +VC+L+
Sbjct:  430 VHHGVKCDACDVCPIIGTRYKCAVRADFDLCEECERAPVGQGSPF-PFLKIRTPTQAPAAIVCLLK 494
[Close]
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A2U1P8I9_ARTAN (PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein n=3 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1P8I9_ARTAN)

HSP 1 Score: 65.1 bits (157), Expect = 4.120e-7
Identity = 32/51 (62.75%), Postives = 36/51 (70.59%), Query Frame = 1 
Query:  940 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 1092
            HRGV+CD CGV PITGPRYKS V  DYDLC+ C AG   A  S Y++I  P
Sbjct:  378 HRGVRCDGCGVHPITGPRYKSKVKDDYDLCSVCFAGMGTA--SDYVRIDRP 426
[Close]
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: C1N3F6_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N3F6_MICPC)

HSP 1 Score: 65.1 bits (157), Expect = 4.680e-7
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 1 
Query:  940 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAA--AEFSPYLKIPTP 1092
            H GVQCD CG+ PITG RYKS    DYDLCAAC   G    A  +P+ ++P P
Sbjct:  297 HAGVQCDACGIMPITGERYKSIAEGDYDLCAACHDSGRGTQAPHAPFARLPLP 349
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BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A7S3E329_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E329_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 5.080e-7
Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 1 
Query:  916 TQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 1092
            T N DA  H  V+CD+CGV PI G R+KS  H +YDLC  C    AA E  PY+++  P
Sbjct:   56 TSNRDAR-HLAVECDICGVYPIRGARFKSLAHDNYDLCERCVRTEAAREQEPYVQVEVP 113
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BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A835GVH0_9MAGN (ZZ-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835GVH0_9MAGN)

HSP 1 Score: 58.9 bits (141), Expect = 6.920e-7
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:  922 NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEA 1044
            N     H+GV+CD CGV PITGPR+KS V  DYDLC+ C A
Sbjct:   36 NTGRTFHQGVRCDSCGVHPITGPRFKSKVKEDYDLCSICYA 76
[Close]
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A7N0TIZ8_KALFE (ZZ-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TIZ8_KALFE)

HSP 1 Score: 63.2 bits (152), Expect = 8.220e-7
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1 
Query:  922 NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAAC-EAGGAAAEFSPYLKIPTP 1092
            + D+  H GV+CDVCGV PITGPR+KS V  +YDLC+ C E  G  A+   Y++I TP
Sbjct:  276 SVDSVFHAGVECDVCGVHPITGPRFKSKVRYNYDLCSLCYEKSGNEAD---YVRIDTP 330
[Close]
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A7N0TJH4_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TJH4_KALFE)

HSP 1 Score: 63.5 bits (153), Expect = 1.120e-6
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 1 
Query:  922 NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 1092
            + D+  H GVQCDVCGV PITGPR+KS V  +YDLC+ C   G +   + Y++I +P
Sbjct:  230 SVDSVFHTGVQCDVCGVHPITGPRFKSKVRYNYDLCSLCY--GKSGNEADYVRIDSP 284
[Close]
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A5N5K5I0_9ROSI (Uncharacterized protein n=4 Tax=Salix TaxID=40685 RepID=A0A5N5K5I0_9ROSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.150e-6
Identity = 32/53 (60.38%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:  940 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAAC--EAGGAAAEFSPYLKIPTP 1092
            HRGVQCD CGV PITGPRYKS V  DYDLC+ C  E G  A     Y+K+  P
Sbjct:  335 HRGVQCDGCGVLPITGPRYKSKVEVDYDLCSICFAEMGNEA----DYIKMDRP 383
[Close]
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A6M2F1D7_9ROSI (Uncharacterized protein n=7 Tax=Populus TaxID=3689 RepID=A0A6M2F1D7_9ROSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.190e-6
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 1 
Query:  940 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 1092
            HRGVQCD CGV PITGPRYKS V  DYDLC+ C A  A    + Y+K+  P
Sbjct:  375 HRGVQCDGCGVHPITGPRYKSKVKEDYDLCSICFA--AVGNEADYIKMDRP 423
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C969_9STRA3.180e-236100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JI15_9PHAE4.560e-1157.58ZZ-type domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2U1P8I9_ARTAN4.120e-762.75PB1 domain, Zinc finger, ZZ-type, UBA-like, Next t... [more]
C1N3F6_MICPC4.680e-754.72Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S3E329_9CHLO5.080e-749.15Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A835GVH0_9MAGN6.920e-760.98ZZ-type domain-containing protein n=1 Tax=Coptis c... [more]
A0A7N0TIZ8_KALFE8.220e-753.45ZZ-type domain-containing protein n=1 Tax=Kalancho... [more]
A0A7N0TJH4_KALFE1.120e-650.88Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A5N5K5I0_9ROSI1.150e-660.38Uncharacterized protein n=4 Tax=Salix TaxID=40685 ... [more]
A0A6M2F1D7_9ROSI1.190e-660.78Uncharacterized protein n=7 Tax=Populus TaxID=3689... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:700282..704042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|91923|CE91922_1228
BRITEko00000,ko00001,ko01000,ko03019,ko03029,ko04131
KEGG Pathwayko04137,map04137
KEGG koko:K05925,ko:K17987,ko:K21997
EC2.1.1.62
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000328,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005773,GO:0005775,GO:0005829,GO:0006914,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016043,GO:0016236,GO:0022607,GO:0031410,GO:0031974,GO:0031982,GO:0032182,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0043130,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051258,GO:0051259,GO:0051641,GO:0061919,GO:0061957,GO:0065003,GO:0070013,GO:0070727,GO:0071840,GO:0072665,GO:0097708,GO:0120113
Descriptionzinc ion binding
COG categoryV
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4582@1|root,KOG4582@2759|Eukaryota
Evalue3.48e-08
Seed ortholog36331.EPrPI00000024107
Hectar predicted targeting categoryother localisation
TranscriptId92245
TrackFilteredModels1
ProteinId91923
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|91923gene_2791Tribonema minus UTEX_B_3156 geneContig_8 700282..704042 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|91923Trimin1|91923|CE91922_1228Tribonema minus UTEX_B_3156 polypeptideContig_8 700439..703871 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2791_5exon_2791_5Tribonema minus UTEX_B_3156 exonContig_8 700282..700660 -
exon_2791_4exon_2791_4Tribonema minus UTEX_B_3156 exonContig_8 701057..701542 -
exon_2791_3exon_2791_3Tribonema minus UTEX_B_3156 exonContig_8 701783..701819 -
exon_2791_2exon_2791_2Tribonema minus UTEX_B_3156 exonContig_8 702289..702548 -
exon_2791_1exon_2791_1Tribonema minus UTEX_B_3156 exonContig_8 703044..704042 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_2791UTR3_2791Tribonema minus UTEX_B_3156 three_prime_UTRContig_8 700282..700438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2791CDS_2791Tribonema minus UTEX_B_3156 CDSContig_8 703044..703871 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_2791UTR5_2791Tribonema minus UTEX_B_3156 five_prime_UTRContig_8 703872..704042 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2791 ID=mRNA_2791|Name=jgi.p|Trimin1|91923|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2161bp|location=Sequence derived from alignment at Contig_8:700282..704042- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGCTACATACACGGAGATATCTGCAGATCAGCTGCAGGGACAGAGTTCT
TCAGACCCGCTGAGCTTCAGCCGCTCCGTGTCAGGTCGCTGTTCACCATC
ACTCACTCCCTTCCTCCCTGCTTCGGCACATCAACAGTCCTCTGCAGAGA
CAGAAGCACACTCAACGCAACATGAGCACCATGGAGCTGAAGGTCAAGTA
CAACGACTCCATCAAGCGCTTTGCCTGGCTCGGTAGCACCATCTTCGTCA
ACCTTGAGCGCGAGATCCAGTCCAGGTTCAATGACCTCAAGACTTCAGAG
GATAGCTTGCGCATCACCTACGTCGATGACGAGGGAGACGAGATCCTCAT
CGAGAATGACGGGGACTTTGCGACTGCCTACAACCACACCAGGCGCGCCT
GGTCTGCTGCGGCCTCTAGCGGCTCGCCTCCGCTGCTGACGCTGCGTGTC
CAGCGCACGGCCTCGTCGCACCGGAGCAATGCAGCTGCAGGAACCGCCAG
CTCCACCGCTAGCGACACTCCGGCTGCCTCCAGCACCTCCACGGAGCAGG
GGGCCAACCCTCCCCCCAGGCTCTCCGACTTCTTCGCCGGCCTAGCCAGC
GCGGCTTCCTCCGCAGCCGCTGCCTCGGGTGCCTCCACCGCCTCCTCGAC
CCCTGCTGCGGTCGACCCCGTCGCCGCGGCGCAGGCCTTCATGGCCACTG
CGCTGCCTGCCGCCATCTCCTCCATACACGCCGCCAGCGGCAGCGCCGCG
CGTGGCTCCGGCGGCAGCTTCCATGACCTGGTCCGCAACGTCATGCGCAA
CGCTGCGACCGCGGCTGCCGCCGCTGCCGACACTGCTGCCGCCGCTGCGC
CCGAGCCTGCTGCCGAGACTGGCGCAGCGGCTGGCGAGGAGCAGGCAGCT
GCTGCGGCGGCGGCGACGCAGAACGCTGATGCGGCGGTGCACCGCGGCGT
GCAGTGCGACGTGTGCGGCGTGTGCCCCATCACCGGCCCGCGCTACAAGT
CCTCCGTGCACGCCGACTACGACCTGTGCGCCGCCTGCGAGGCCGGCGGC
GCCGCCGCCGAGTTCAGCCCCTACCTCAAGATACCTACCCCCGCCCAGGC
CCCAGCAGTGCTCGTCTGCGTCCTCCGCGACGGCACGCACGCCGGTGTGC
TGCCGTTTCTCAGCGGCTGCCCCGGCATGCGCGGCATGAACTTCAACAAC
ATGAACTTTGGCGGCGGCGGCGGCGAGTGCGGCATGGGCGGCGGCGGCGG
CGGGGCTAGGTGCCGCAGGTGGCGCCGCCGCCGTCAGGAGGCCGCTGCCG
CCGCCCCCGCCGCCGCTGCTGCTGATCTGAGCCCGCCCACGGCATCCATC
TTCGACTCGGCCACTCCGCTGCTGATCGCTCTGGACGCCGCCGCCGCCAC
CTTTGGCACCGCCACGCCCGCCTCTGCTGCCGCCGCCGCCGCTGCCGCCG
ACGGCAGCAGCGACGCCGACGAGTACGACATCGTCGGCCCCCCCTCCCCC
GCCGCCGCCGCGCCCAGCGCTGCTGCCGCCGCCGCCGAGCCGAGCGCTGC
TGTCGCCACCGCTGCTGTGGAGCCGGTGGCGGCGCGCGCCAGCATGGTGC
CCGATTTTGACGGTGCCGAGGAGACCAAGGAGGACGGCGACGTTGACGTG
GTTGCGGATGCTCAGCAGCAGGCCGCTGCTGCTGCTGCTACCGCCCCTGT
GAGCTTTGCCGCTACGGCGGCGAGCGCTGAGGAGTGGGCTGCGGCCCTGC
CGCGCCCGGAGCCCGTCACGCCCCCCGTGCAGTCCCGCGCCACCGCCCCC
CCCCAGACTCAGACCCCGACTCCCGACGTCAGCGAGGAGTCCGAGAAGCG
CCGCCGCGCCAAGCGCTGGCAGGCGGAGCTCGTGCGTCTCGCCGAGATGG
GCTTTGTCGACTTTGCGCGCAACCTCGCGCTGCTCGAGAAGCACGTCGGC
GCGCCCGGCGCCGGCGGCATGACGGCAGTGCTCAACGACCTGCTCTCCGA
CTAGGCGGCGGTGCGTCTCGTCGCCGCAGCAGCAGCAGCAGCGCTCGGCA
TCCTGCTGTGCGACTGAGGATGGGCATTGCGCTGCCGCCGCTGCTGCTGC
TGCTGCCGGTCGCCGCGCCACGCAGCGGTCGTCGGCGGCGGCGGCGGCGG
CGACGGCAGCG
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protein sequence of jgi.p|Trimin1|91923

>Trimin1|91923|CE91922_1228 ID=Trimin1|91923|CE91922_1228|Name=jgi.p|Trimin1|91923|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=611bp
MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITY
VDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASSH
RSNAAAGTASSTASDTPAASSTSTEQGANPPPRLSDFFAGLASAASSAAA
ASGASTASSTPAAVDPVAAAQAFMATALPAAISSIHAASGSAARGSGGSF
HDLVRNVMRNAATAAAAAADTAAAAAPEPAAETGAAAGEEQAAAAAAATQ
NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSP
YLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGGG
GECGMGGGGGGARCRRWRRRRQEAAAAAPAAAAADLSPPTASIFDSATPL
LIALDAAAATFGTATPASAAAAAAAADGSSDADEYDIVGPPSPAAAAPSA
AAAAAEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADAQQQ
AAAAAATAPVSFAATAASAEEWAAALPRPEPVTPPVQSRATAPPQTQTPT
PDVSEESEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGM
TAVLNDLLSD*
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mRNA from alignment at Contig_8:700282..704042-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2791 ID=mRNA_2791|Name=jgi.p|Trimin1|91923|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3761bp|location=Sequence derived from alignment at Contig_8:700282..704042- (Tribonema minus UTEX_B_3156 )
CAGCTACATACACGGAGATATCTGCAGATCAGCTGCAGGGACAGAGTTCT
TCAGACCCGCTGAGCTTCAGCCGCTCCGTGTCAGGTCGCTGTTCACCATC
ACTCACTCCCTTCCTCCCTGCTTCGGCACATCAACAGTCCTCTGCAGAGA
CAGAAGCACACTCAACGCAACATGAGCACCATGGAGCTGAAGGTCAAGTA
CAACGACTCCATCAAGCGCTTTGCCTGGCTCGGTAGCACCATCTTCGTCA
ACCTTGAGCGCGAGATCCAGTCCAGGTTCAATGACCTCAAGACTTCAGAG
GATAGCTTGCGCATCACCTACGTCGATGACGAGGGAGACGAGATCCTCAT
CGAGAATGACGGGGACTTTGCGACTGCCTACAACCACACCAGGCGCGCCT
GGTCTGCTGCGGCCTCTAGCGGCTCGCCTCCGCTGCTGACGCTGCGTGTC
CAGCGCACGGCCTCGTCGCACCGGAGCAATGCAGCTGCAGGAACCGCCAG
CTCCACCGCTAGCGACACTCCGGCTGCCTCCAGCACCTCCACGGAGCAGG
GGGCCAACCCTCCCCCCAGGCTCTCCGACTTCTTCGCCGGCCTAGCCAGC
GCGGCTTCCTCCGCAGCCGCTGCCTCGGGTGCCTCCACCGCCTCCTCGAC
CCCTGCTGCGGTCGACCCCGTCGCCGCGGCGCAGGCCTTCATGGCCACTG
CGCTGCCTGCCGCCATCTCCTCCATACACGCCGCCAGCGGCAGCGCCGCG
CGTGGCTCCGGCGGCAGCTTCCATGACCTGGTCCGCAACGTCATGCGCAA
CGCTGCGACCGCGGCTGCCGCCGCTGCCGACACTGCTGCCGCCGCTGCGC
CCGAGCCTGCTGCCGAGACTGGCGCAGCGGCTGGCGAGGAGCAGGCAGCT
GCTGCGGCGGCGGCGACGCAGAACGCTGATGCGGCGGTGCACCGCGGCGT
GCAGTGCGACGTGTGCGGCGTGTGCCCCATCACCGGCCCGCGCTACAAGG
TGAGGTTTGTGGTTCTTGAACTTGGCGCATGCGGCCTACTGCGCGCAAGT
GCATGTGTACATGTGTCATGAGTGCATGCGCGCGATGCCCTCTAGTATGA
TGTGTTGTGCATGATGGATGGTGTCCACTCTTCAACAGAGGAGGCTCGTA
GAACTTGTTCTGTGCATGACTTTTTAAGATGTGCATTCTCGAGCTGTTAT
GTCATGTGTGATGCGTTCCCGATGAAAGCGATAGCAGTAACAGTAGCTGT
TGCGGCGCCTTGTGCGCATTCATGCTGCGTGCGCTTTTGTGTCAACTCTA
CCCGTAACCCTACCCCTCACGCTACCCTTCAACGCACCCCGCCTCATTTT
TCCAAGGCAATTCCTCAACCCCCCCGCTAGACGCATACACGACAGCATCA
AAGTAACCATGCCTCTCTCACCATCGCCCCCCCCCCTCCTCCCCCCCCGC
GCACTTCCCCCTTTTACCCCCCCCCCCCCCCCTCCCCCTTCCAGTCCTCC
GTGCACGCCGACTACGACCTGTGCGCCGCCTGCGAGGCCGGCGGCGCCGC
CGCCGAGTTCAGCCCCTACCTCAAGATACCTACCCCCGCCCAGGCCCCAG
CAGTGCTCGTCTGCGTCCTCCGCGACGGCACGCACGCCGGTGTGCTGCCG
TTTCTCAGCGGCTGCCCCGGCATGCGCGGCATGAACTTCAACAACATGAA
CTTTGGCGGCGGCGGCGGCGAGTGCGGCATGGGCGGCGGCGGCGGCGGGG
CTAGGTGAGCGTCGCGGCGGCAGTACTTGCGGTTATCAAGCGCGTTTGAG
GGGTGAGAAACGGTGCGCTGTGGAGTGCTCGGCTTGCTGTGTCTAGTCCA
TGTCATTTGATTATATTTGTCCAGTGTCTGTGTCGAAGGCGGCCTTGATT
CAATTTAGAGTATGCCATGAGTGCTTGCTTGATGTAGGAGCACTACCCCT
GATGGTGGCGGCGGTGGCACCGCTGTGTACGCGCCACCGTATCAGCAGCA
GAGCCTTGCTGCAATTGCAGCATCATCATGCATGCATGCACGCAGCGCGA
GAATGAATCTGCTGCTTCGTTGATTGCTCGCCGCATGGCGCGACAATCAC
ACTTCACTCGTGATGCCATCAGTGCATGCAGCTGTAGAGCACGTCCCGTG
CACACATACACGCCCCTACCATGATGCGAACACCGCAGCTGACTCTGCGC
CTACCTCTCTCCGTGCCCCGCAGGTGCCGCAGGTGGCGCCGCCGCCGTCA
GGAGGCCGCTGCCGCCGCGGCCGCTGCTGCTGCTGGCGGCGATGCTCCCG
CCGCCGCCGCCCCCGCAGACGGCGACGCTGGCGCCGAGAAAGAGATCCCG
GAGGCCTCCAGCGAGTACGAGCAGCAGCTGCAGAATGCCATCCACGCCAG
CTTCACCAGCGACGCCTTCGCCGACGCCTCCGCTGCTGCTGCCGCCGCCC
CCGTGGCCGCGCCGCCCGCCGCTGCTGCCGCCGCAGGGGCTGCGCCCGAG
GCCGCCGCCCCCGCCGCCGCTGCTGCTGATCTGAGCCCGCCCACGGCATC
CATCTTCGACTCGGCCACTCCGCTGCTGATCGCTCTGGACGCCGCCGCCG
CCACCTTTGGCACCGCCACGCCCGCCTCTGCTGCCGCCGCCGCCGCTGCC
GCCGACGGCAGCAGCGACGCCGACGAGTACGACATCGTCGGCCCCCCCTC
CCCCGCCGCCGCCGCGCCCAGCGCTGCTGCCGCCGCCGCCGAGCCGAGCG
CTGCTGTCGCCACCGCTGCTGTGGAGCCGGTGGCGGCGCGCGCCAGCATG
GTGCCCGATTTTGACGGTGCCGAGGAGACCAAGGAGGACGGCGACGTTGA
CGTGGTTGCGGATGCTCAGCAGCAGGCCGCTGCTGCTGCTGCTACCGCCC
CTGTGAGCTTTGCCGCTACGGCGGCGAGCGCTGAGGAGTGGGCTGCGGCC
CTGCCGCGCCCGGAGCCCGTCACGCCCCCCGTGCAGGTGCGTCTCTTTCT
TGTGCGCTCAAGTAATTTGTGTACACTGTGAATGATCTGCTGTTAGTCAT
GTGTGTATGTTTGAGTATATCGCGACTGTATCATCGCGGTGCAGGGTGAT
ACAGACGCACATACACACAGTGTGTGTATGTGTGTGTGTGCGATGCAGAA
CAGTAGTCTTTGTGCAGGCGCTTGTTGCCAGTAATTGAGCATCCCCCCCC
CCGGCGGCACCTCTCTTGGCGTCAGTAGTAGGGCGATAAGAGCTGTCGTT
CCCTCTATCTTCCACCACAGCTTCTGTAGATGACTGTTAAATCATGTAAC
CTCAAATCAGCAAGCAATCTCTTACAGTCAGCTCACCCCCCCCCCCCCCC
CCCCGGCTTCCTCCTTCCCCCCCTCCCCCCAGTCCCGCGCCACCGCCCCC
CCCCAGACTCAGACCCCGACTCCCGACGTCAGCGAGGAGTCCGAGAAGCG
CCGCCGCGCCAAGCGCTGGCAGGCGGAGCTCGTGCGTCTCGCCGAGATGG
GCTTTGTCGACTTTGCGCGCAACCTCGCGCTGCTCGAGAAGCACGTCGGC
GCGCCCGGCGCCGGCGGCATGACGGCAGTGCTCAACGACCTGCTCTCCGA
CTAGGCGGCGGTGCGTCTCGTCGCCGCAGCAGCAGCAGCAGCGCTCGGCA
TCCTGCTGTGCGACTGAGGATGGGCATTGCGCTGCCGCCGCTGCTGCTGC
TGCTGCCGGTCGCCGCGCCACGCAGCGGTCGTCGGCGGCGGCGGCGGCGG
CGACGGCAGCG
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Coding sequence (CDS) from alignment at Contig_8:700282..704042-

>mRNA_2791 ID=mRNA_2791|Name=jgi.p|Trimin1|91923|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1833bp|location=Sequence derived from alignment at Contig_8:700282..704042- (Tribonema minus UTEX_B_3156 )
ATGAGCACCATGGAGCTGAAGGTCAAGTACAACGACTCCATCAAGCGCTT
TGCCTGGCTCGGTAGCACCATCTTCGTCAACCTTGAGCGCGAGATCCAGT
CCAGGTTCAATGACCTCAAGACTTCAGAGGATAGCTTGCGCATCACCTAC
GTCGATGACGAGGGAGACGAGATCCTCATCGAGAATGACGGGGACTTTGC
GACTGCCTACAACCACACCAGGCGCGCCTGGTCTGCTGCGGCCTCTAGCG
GCTCGCCTCCGCTGCTGACGCTGCGTGTCCAGCGCACGGCCTCGTCGCAC
CGGAGCAATGCAGCTGCAGGAACCGCCAGCTCCACCGCTAGCGACACTCC
GGCTGCCTCCAGCACCTCCACGGAGCAGGGGGCCAACCCTCCCCCCAGGC
TCTCCGACTTCTTCGCCGGCCTAGCCAGCGCGGCTTCCTCCGCAGCCGCT
GCCTCGGGTGCCTCCACCGCCTCCTCGACCCCTGCTGCGGTCGACCCCGT
CGCCGCGGCGCAGGCCTTCATGGCCACTGCGCTGCCTGCCGCCATCTCCT
CCATACACGCCGCCAGCGGCAGCGCCGCGCGTGGCTCCGGCGGCAGCTTC
CATGACCTGGTCCGCAACGTCATGCGCAACGCTGCGACCGCGGCTGCCGC
CGCTGCCGACACTGCTGCCGCCGCTGCGCCCGAGCCTGCTGCCGAGACTG
GCGCAGCGGCTGGCGAGGAGCAGGCAGCTGCTGCGGCGGCGGCGACGCAG
AACGCTGATGCGGCGGTGCACCGCGGCGTGCAGTGCGACGTGTGCGGCGT
GTGCCCCATCACCGGCCCGCGCTACAAGTCCTCCGTGCACGCCGACTACG
ACCTGTGCGCCGCCTGCGAGGCCGGCGGCGCCGCCGCCGAGTTCAGCCCC
TACCTCAAGATACCTACCCCCGCCCAGGCCCCAGCAGTGCTCGTCTGCGT
CCTCCGCGACGGCACGCACGCCGGTGTGCTGCCGTTTCTCAGCGGCTGCC
CCGGCATGCGCGGCATGAACTTCAACAACATGAACTTTGGCGGCGGCGGC
GGCGAGTGCGGCATGGGCGGCGGCGGCGGCGGGGCTAGGTGCCGCAGGTG
GCGCCGCCGCCGTCAGGAGGCCGCTGCCGCCGCCCCCGCCGCCGCTGCTG
CTGATCTGAGCCCGCCCACGGCATCCATCTTCGACTCGGCCACTCCGCTG
CTGATCGCTCTGGACGCCGCCGCCGCCACCTTTGGCACCGCCACGCCCGC
CTCTGCTGCCGCCGCCGCCGCTGCCGCCGACGGCAGCAGCGACGCCGACG
AGTACGACATCGTCGGCCCCCCCTCCCCCGCCGCCGCCGCGCCCAGCGCT
GCTGCCGCCGCCGCCGAGCCGAGCGCTGCTGTCGCCACCGCTGCTGTGGA
GCCGGTGGCGGCGCGCGCCAGCATGGTGCCCGATTTTGACGGTGCCGAGG
AGACCAAGGAGGACGGCGACGTTGACGTGGTTGCGGATGCTCAGCAGCAG
GCCGCTGCTGCTGCTGCTACCGCCCCTGTGAGCTTTGCCGCTACGGCGGC
GAGCGCTGAGGAGTGGGCTGCGGCCCTGCCGCGCCCGGAGCCCGTCACGC
CCCCCGTGCAGTCCCGCGCCACCGCCCCCCCCCAGACTCAGACCCCGACT
CCCGACGTCAGCGAGGAGTCCGAGAAGCGCCGCCGCGCCAAGCGCTGGCA
GGCGGAGCTCGTGCGTCTCGCCGAGATGGGCTTTGTCGACTTTGCGCGCA
ACCTCGCGCTGCTCGAGAAGCACGTCGGCGCGCCCGGCGCCGGCGGCATG
ACGGCAGTGCTCAACGACCTGCTCTCCGACTAG
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