mRNA_11238 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A836C879_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C879_9STRA) HSP 1 Score: 349 bits (895), Expect = 7.990e-122 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFAAALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFRQR 507 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFAAALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFRQR Sbjct: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFAAALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFRQR 169
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: D7FRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF6_ECTSI) HSP 1 Score: 178 bits (451), Expect = 4.280e-54 Identity = 88/170 (51.76%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFAA----ALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVF 498 ASLD +V LWDARN+G + + + +A LPH RSVNSAHF+P G ++ T CQDD++ LY L A+ + + + HNNQTGRWLTKFQA WDPK+ LF GSM K PHGI ++ A K P A + GG+VM SIQSVVA HP ++AG+N+SGR H+F Sbjct: 9 ASLDRSVRLWDARNVGAGTGSSGIGGMQHVAELPHFRSVNSAHFSPTGEWMATVCQDDKIRLYQDLGSASGKQVSASQVLPHNNQTGRWLTKFQASWDPKSKGLFAIGSMQKYPHGIHLYSVNGGA--KKPSAVEVTGGDVMGSIQSVVAFHPSRDVLAGVNSSGRAHIF 176
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: K3W540_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W540_GLOUD) HSP 1 Score: 128 bits (321), Expect = 1.130e-31 Identity = 77/173 (44.51%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTL------AFAAALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFR 501 ASLD TVCLWD+R + K S KPL T+PH RSVN A+F+P G +LVT D+ ++L++T A + A +I HNNQTGRWLTK A WDPK D FV G M + P I F AT K PI E S+ S+ HP L + G N+SGR ++R Sbjct: 341 ASLDRTVCLWDSRKLSK-------SNNKPLVTMPHERSVNCAYFSPTGDHLVTVGLDNYVNLFNTGDAKHHDAHSVAPTLAIPHNNQTGRWLTKLHATWDPKHKDRFVIGCMQQ-PRRIQLFKATR----KNPIQELTS--EYFNSVHSINVFHPTLDAICGGNSSGRLSLWR 499
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A2D4C066_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C066_PYTIN) HSP 1 Score: 126 bits (316), Expect = 9.890e-31 Identity = 73/172 (42.44%), Postives = 95/172 (55.23%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFA---AALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFRQR 507 ASLD TV LWD R + K S PL T+PH RSVN A+F+P+G +LVT CQDD +++T A I HNNQTGRWLTK A WDPK +V G M + P + F+AT K PI + S+ S+ HP L ++AG N+SGR ++R + Sbjct: 412 ASLDRTVSLWDVRKLSK-------SKNTPLVTMPHTRSVNCAYFSPSGEHLVTVCQDDYNRVFETADLAKLPTTPALRIPHNNQTGRWLTKLHAAWDPKRPTQYVVGCMQQ-PRRVQIFDATR----KAPIQELTS--DWFASVHSINVFHPSLNVIAGGNSSGRACLWRPK 569
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A5D6XZ84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ84_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.860e-30 Identity = 77/176 (43.75%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHL--------YDTLAFAAALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFRQ 504 ASLD TVCLWDAR + K +AP L T+PH RSVN A+F+P G +LVT QDD +++ YD + A L +I HNN TGRWLTK A WDPK D FV G M + P + F A A K PI E S+ S+ HP L + G N+SGR ++R+ Sbjct: 405 ASLDRTVCLWDARQLRKSKNAP-------LVTMPHRRSVNCAYFSPDGEHLVTVGQDDYVNVFATGDAQHYDAHSVAPTL--AIPHNNATGRWLTKLHAAWDPKRKDQFVLGCMQQ-PRRLQIFQA----ARKNPIQELTS--EYFNSVHSINVFHPTLDAIVGGNSSGRLALWRR 564
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A833WN18_PHYIN (WD domain G-beta repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WN18_PHYIN) HSP 1 Score: 124 bits (310), Expect = 7.140e-30 Identity = 78/179 (43.58%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPA-GAYLVTTCQDDRLHLYDTLAF---------AAALGES--IAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFR 501 ASLD TVCLWDARN+ + P LATLPH RSVN A+F+P GA+LVT QD + ++DT + A +L +S + HNN TGRWLTK A WDPK + FV G M + P I F A G+ L+ S+ S+ A HP L L+AG N+SGR ++R Sbjct: 405 ASLDRTVCLWDARNLSSKKNTP-------LATLPHHRSVNCAYFSPRDGAWLVTVGQDSYIDMFDTSSLTQRNPSDTSAPSLPDSARVRHNNVTGRWLTKLHAAWDPKRPNQFVMGCMEQ-PRRIQIFRA-----GRRRPVRELQSDN-FASVHSINAFHPHLELIAGGNSSGRLALWR 569
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A0L8FXX7_OCTBM (WD repeat-containing protein 76 (Fragment) n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8FXX7_OCTBM) HSP 1 Score: 119 bits (298), Expect = 7.340e-30 Identity = 71/170 (41.76%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAP-AGAYLVTTCQDDRLHLYDTLAFAAALG--ESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFR 501 A LD TV LWD R A K K + ++ +R V+SA+F+P G Y+++T QDDR+ +YD+ ++++ SI+HNNQTGRWLTKF+A W P DLF+ GSM++ P I+ N GK + L E++ S+QS+ HP + V G NASG+ HVF+ Sbjct: 124 AGLDCTVSLWDLR-------ATKKKPNK-ICSMSASRMVDSAYFSPLTGKYILSTAQDDRIRIYDSSKLSSSMPCLHSISHNNQTGRWLTKFRATWHPCREDLFISGSMNR-PRQIELINDE----GKCMMV--LHHPELINSVQSLNEFHPTINAVVGANASGKLHVFK 278
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A8K1CSD2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSD2_PYTOL) HSP 1 Score: 122 bits (307), Expect = 1.520e-29 Identity = 74/173 (42.77%), Postives = 96/173 (55.49%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFAAALGES------IAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFR 501 ASLD TVCLWD+R + K PL T+PH+RSVN A+F+P G +LVT QD+ H+YDT + + I+HNNQTGRWLTK A WDPK D +V G M + P + F+AT K PI E S+ S+ HP +AG N+SGR ++R Sbjct: 377 ASLDRTVCLWDSRQLKK---------ATPLLTMPHSRSVNCAYFSPNGHHLVTVGQDNYNHVYDTRDASHHSTQDVKPTLRISHNNQTGRWLTKLHAAWDPKRPDHYVIGCMEQ-PRRVQIFHATR----KSPIQELTS--EWFASVHSINVFHPMRDWIAGGNSSGRLCLWR 533
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A8C8A696_9STRI (WD repeat-containing protein 76 n=1 Tax=Otus sunia TaxID=257818 RepID=A0A8C8A696_9STRI) HSP 1 Score: 120 bits (302), Expect = 4.030e-29 Identity = 66/171 (38.60%), Postives = 99/171 (57.89%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPA-GAYLVTTCQDDRLHLYDT--LAFAAALGESIAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFRQ 504 A+ VC++D R + H + P S + H +SV SA+F+P G+ +VT C DD+L +YDT L+ AA+ +++HNN TGRWLT+FQA+WDPK D FV GSM++ P I+ F T + + + S+ S+ HP ++ G N+SGR HVF++ Sbjct: 312 AAGSVDVCIYDVRRLKSHGNKPVSSLKG------HTKSVASAYFSPVTGSRVVTVCADDKLRVYDTSSLSSTAAVLSTVSHNNNTGRWLTRFQAIWDPKREDCFVVGSMAR-PRQIEVFQDTG------ELLHSFSNLDCLGSVCSINVVHPSRNILVGGNSSGRLHVFKE 469
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Match: A0A329SJU6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SJU6_9STRA) HSP 1 Score: 121 bits (303), Expect = 6.800e-29 Identity = 79/181 (43.65%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 1 ASLDTTVCLWDARNMGKHHSAPKVSARK--PLATLPHARSVNSAHFAPA-GAYLVTTCQDDRLHLYDTLAF---------AAALGESIA--HNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVFR 501 ASLD TVCLWDAR K+S++K PL TLPH RS+N A+F+P GA+LVT QD + ++DT + A L +S+ HNN TGRWLTK A WDPK S+ FV G M + P I F A G+ L+ S+ S+ A HP L L+AG N+SGR ++R Sbjct: 401 ASLDRTVCLWDAR---------KLSSKKNTPLVTLPHYRSINCAYFSPRDGAWLVTVGQDSYIDMFDTSSLTERKPSDKSAITLPQSVRVRHNNVTGRWLTKLHAAWDPKRSNRFVIGCMEQ-PRRIQIFRA-----GRRRPVRELKSDN-FASVHSINAFHPHLELIAGGNSSGRLALWR 565 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171117 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11238 ID=mRNA_11238|Name=jgi.p|Trimin1|171117|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=510bp|location=Sequence derived from alignment at Contig_79:634669..637377- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCCTCCCTGGACACCACCGTGTGCCTGTGGGACGCGCGCAACATGGGCAAback to top protein sequence of jgi.p|Trimin1|171117 >Trimin1|171117|e_gw1.79.48.1 ID=Trimin1|171117|e_gw1.79.48.1|Name=jgi.p|Trimin1|171117|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=170bp ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYback to top mRNA from alignment at Contig_79:634669..637377- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11238 ID=mRNA_11238|Name=jgi.p|Trimin1|171117|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2709bp|location=Sequence derived from alignment at Contig_79:634669..637377- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_79:634669..637377- >mRNA_11238 ID=mRNA_11238|Name=jgi.p|Trimin1|171117|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=510bp|location=Sequence derived from alignment at Contig_79:634669..637377- (Tribonema minus UTEX_B_3156 )back to top |