mRNA_12471 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A836CA01_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA01_9STRA) HSP 1 Score: 2053 bits (5319), Expect = 0.000e+0 Identity = 1389/1389 (100.00%), Postives = 1389/1389 (100.00%), Query Frame = 1
Query: 1 MSRGFTEQDQEALHARTLASQTRGRVGLGFSSAAASHAHRDASAPMLFQRASAGDAPQQQQTWVKGANLGAPGTAPAFVRASADGDGGSGGAKRKYDDLRGGSSXXXXXXXXXXXXGMVLPAWMTGGGDSKGGAPGGLQQGRDRSRSPDRPLPYDLPPGRGEGDGGSXXXXXXXXXXXXXXXXXXXXXXXDGKRGGXSSRSAERVRPSESARRGSGDXXXXXXXXXXXXXXXSKWDRRPSPAARRDACARSPERRSRGGRDLGGDARCRSGDGGDHRSSSHRDRRDSXXXXXXXXXXXXXXXXXXXXXXXRSRSGSGERRXXXXXXXXXXXXXXXXXXXXXXXXADPACASEPGAAERAATGELGRGEDPALAGLTPMERVRELTRRQLSAAAATDAHLKPGGAVQSGSSTVGVKGAKAGGGGGVHGSDESATSLTRAVPQRLRQMEAASXXXXXXXXXXXXXXXXXXXXXXRKMQLEVAHHDAIFAPTGTVLVALPPDVLAAPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDDRGAAEPAELALRELGLGGSGVGGGEGQGGVPLYARLKLGDAVEAQYTEDDTWYAAKVLQVIHSGYSICKVKVEYTQYGNQETILWKRVRIPGETAASPTTAXXXXXXXXXXXXGSSRDRPLPYDVSHGSSAQHRGRGSSGSASPEXXXXXALPPGRAPDKGDRRSGGGGGRSGSGRRASGERSLXXXXXXXXXXXXXXXXXXXXXGDRGPSPPDRALPYDLPHGAGDRMXXXXXXXXXXXXTSAERRPVGQQMLSGRVGAVADGAAQQRNGGDAVPPPLSQGHLPKGKEHKKKKTFEVPVRWRRSPPRSSKATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPGSWKERLAQRKAAAXXXXXXXXXXXXXXXGWSRWVERGQLTCDFFKTPTDDAIAFTLFGTDYKFTGFKNGIDTYPPDKPSAGVDEVSSALGGRSAVYGDVSGLMGAFAGVVWDGACDTQVFALDLKLPSDIAGREKLVMSIPCGGDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRLGDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFRVGA 4167
MSRGFTEQDQEALHARTLASQTRGRVGLGFSSAAASHAHRDASAPMLFQRASAGDAPQQQQTWVKGANLGAPGTAPAFVRASADGDGGSGGAKRKYDDLRGGSSXXXXXXXXXXXXGMVLPAWMTGGGDSKGGAPGGLQQGRDRSRSPDRPLPYDLPPGRGEGDGGSXXXXXXXXXXXXXXXXXXXXXXXDGKRGGXSSRSAERVRPSESARRGSGDXXXXXXXXXXXXXXXSKWDRRPSPAARRDACARSPERRSRGGRDLGGDARCRSGDGGDHRSSSHRDRRDSXXXXXXXXXXXXXXXXXXXXXXXRSRSGSGERRXXXXXXXXXXXXXXXXXXXXXXXXADPACASEPGAAERAATGELGRGEDPALAGLTPMERVRELTRRQLSAAAATDAHLKPGGAVQSGSSTVGVKGAKAGGGGGVHGSDESATSLTRAVPQRLRQMEAASXXXXXXXXXXXXXXXXXXXXXXRKMQLEVAHHDAIFAPTGTVLVALPPDVLAAPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDDRGAAEPAELALRELGLGGSGVGGGEGQGGVPLYARLKLGDAVEAQYTEDDTWYAAKVLQVIHSGYSICKVKVEYTQYGNQETILWKRVRIPGETAASPTTAXXXXXXXXXXXXGSSRDRPLPYDVSHGSSAQHRGRGSSGSASPEXXXXXALPPGRAPDKGDRRSGGGGGRSGSGRRASGERSLXXXXXXXXXXXXXXXXXXXXXGDRGPSPPDRALPYDLPHGAGDRMXXXXXXXXXXXXTSAERRPVGQQMLSGRVGAVADGAAQQRNGGDAVPPPLSQGHLPKGKEHKKKKTFEVPVRWRRSPPRSSKATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPGSWKERLAQRKAAAXXXXXXXXXXXXXXXGWSRWVERGQLTCDFFKTPTDDAIAFTLFGTDYKFTGFKNGIDTYPPDKPSAGVDEVSSALGGRSAVYGDVSGLMGAFAGVVWDGACDTQVFALDLKLPSDIAGREKLVMSIPCGGDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRLGDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFRVGA
Sbjct: 1 MSRGFTEQDQEALHARTLASQTRGRVGLGFSSAAASHAHRDASAPMLFQRASAGDAPQQQQTWVKGANLGAPGTAPAFVRASADGDGGSGGAKRKYDDLRGGSSXXXXXXXXXXXXGMVLPAWMTGGGDSKGGAPGGLQQGRDRSRSPDRPLPYDLPPGRGEGDGGSXXXXXXXXXXXXXXXXXXXXXXXDGKRGGXSSRSAERVRPSESARRGSGDXXXXXXXXXXXXXXXSKWDRRPSPAARRDACARSPERRSRGGRDLGGDARCRSGDGGDHRSSSHRDRRDSXXXXXXXXXXXXXXXXXXXXXXXRSRSGSGERRXXXXXXXXXXXXXXXXXXXXXXXXADPACASEPGAAERAATGELGRGEDPALAGLTPMERVRELTRRQLSAAAATDAHLKPGGAVQSGSSTVGVKGAKAGGGGGVHGSDESATSLTRAVPQRLRQMEAASXXXXXXXXXXXXXXXXXXXXXXRKMQLEVAHHDAIFAPTGTVLVALPPDVLAAPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDDRGAAEPAELALRELGLGGSGVGGGEGQGGVPLYARLKLGDAVEAQYTEDDTWYAAKVLQVIHSGYSICKVKVEYTQYGNQETILWKRVRIPGETAASPTTAXXXXXXXXXXXXGSSRDRPLPYDVSHGSSAQHRGRGSSGSASPEXXXXXALPPGRAPDKGDRRSGGGGGRSGSGRRASGERSLXXXXXXXXXXXXXXXXXXXXXGDRGPSPPDRALPYDLPHGAGDRMXXXXXXXXXXXXTSAERRPVGQQMLSGRVGAVADGAAQQRNGGDAVPPPLSQGHLPKGKEHKKKKTFEVPVRWRRSPPRSSKATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPGSWKERLAQRKAAAXXXXXXXXXXXXXXXGWSRWVERGQLTCDFFKTPTDDAIAFTLFGTDYKFTGFKNGIDTYPPDKPSAGVDEVSSALGGRSAVYGDVSGLMGAFAGVVWDGACDTQVFALDLKLPSDIAGREKLVMSIPCGGDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRLGDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFRVGA 1389
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A835Z022_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z022_9STRA) HSP 1 Score: 223 bits (567), Expect = 4.180e-57 Identity = 162/472 (34.32%), Postives = 223/472 (47.25%), Query Frame = 1
Query: 2812 VERGQLTCDFFKTPTD---DAIAFTLFGTDY--KFTGFKNGIDTYPPDKPS-AGVDEVSSALGGRSAVYGDVSGLMGAFAGVVWDGACDTQVFALDLKLPSDIAG--------REKLVMSIPCGGDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRL-GDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQV-AGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALG-DPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDY-CPPAYRLARFSNPDRAFTYGGMRTGTSV--NDNARTLRMTRYTVANFRVGA 4167
+RG L+C D + L GT K F + P D S G E L G G V G +G +VWD AC ++ F LD+ LP++ R++ + S+PC A CTWLA ++ DP P + AA A HDADVELLQ ++ GDGDA D FHR GGRRL G+ V+MPSG + I +L+AYT A +GG TQ +S + A +AN +L N+ + Y R++ YV+ YV+ +G+ + + G V + +RDTY FDL+ M H + CG G+ LG + V+ C++G + H HEMGHNMGA H D T WPY +G++ C G +F ++MAY DY C R+ +S Y G GTS +DNAR R T V+NFRV +
Sbjct: 79 AQRGSLSCAALAGAAAGGADTLELNLLGTTITAKMDYFDHDAAAAPGDLASPGGAAEPQPVLAGLYTWAGQVKGGLGGTVVIVWDAACSSEAFRLDVALPTEEDTTETGKKRVRDQKITSLPCADQA--GCTWLARISHDPLPRSVK---------RSAPKSAHRALSASQAATAAAHDADVELLQQVLRGDGDAADAFHRGGGRRLEGENAVIMPSGRRLDDGSVINVLMAYTNAAEAAMGGATQTVSVINAAYGTANQVLANTNLPY-RMSMSYVKVDYVEATSGDTMGTALNALTNGDVTNIFYYRDTYAFDLVLMIIHDPNYMY-CGMGWVGFPPMTDYSGLGFTIVEAPCMNG--YTHMHEMGHNMGAFHDRATDANSGTPGWPYAWGYRTC-----GSTNKFSSVMAYT---DYSCSGQVRVPYYSTS--LINYNGSPLGTSTPGDDNARVFRETSLPVSNFRVSS 525
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A835YPH0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH0_9STRA) HSP 1 Score: 190 bits (483), Expect = 5.100e-48 Identity = 158/472 (33.47%), Postives = 224/472 (47.46%), Query Frame = 1
Query: 2812 VERGQLTCDFFKTPTDDAIAFTLFGTDYKFTGFKNGIDTYPPDKPSAGVDEVS---SALGGRSAVYG---DVSGLMGAFAGVVWDGACDTQVFALDLKL-------PSDIAGREKLVMSIPCGGDAPAS---CTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRLGDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQML-SRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQM--LSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNP-DRAFTYGGMRTGTSVNDNARTLRMTRYTVANFRVGA 4167
V+RG L + + + F + F FK G P S E + S GR A G D + GAF VW + + L L P R+ LV S+PC A+ CTWLA T + +P+ + XXXX + AD ELLQLL+ GDGDAHDHF RSGGR LGDG+V+MPSG + IK+ L +TA ARD +GG + SR+T A+ SAN++L NSG+ + + A+ +++V+ A GLE + D + + + +R H DL+Q+ A GR EC Q+ L+ A ++ + SA +CL G W + N+GAQ G +DW Y + C+ P + T+M N CP RL+ FS+P D + + ++ GT+ DNAR L TR VAN+R+GA
Sbjct: 55 VQRGVLNAKAYTSDASGNLILKAFDYQWTFPNFKKGTVQTPAGASSDAPFETTLPTSNNDGRLAFAGATADDARKGGAF---VWTPDMNPAIHFLQLHDGAATAVDPKTSKPRDTLVESLPCNAAQTAALPGCTWLAKFTVNSAPSGTGLTLAKKAPNGGGRRAADAXXXXXXXX---DESADRELLQLLLSGDGDAHDHFQRSGGRVLGDGSVIMPSGRRLDDGSVIKVGLLWTAAARDALGGLAATIRSRITAAMTSANTVLNNSGIGF-QFAYQIGRTTFVEPATGGLEAIVRDWHARQLA--ELFRRVNHIDLVQVVAATGGR--ECSVSAQLTHLTTPADTDYIALSAAHYSCLGYGTWGSLNGFARNLGAQ---GISTEFPSDWSYARAYTTCLTPGA----TYQTVMGDNTFA--CPAMPRLSTFSSPIDWSLGWLALKRGTASKDNARVLESTRSYVANYRLGA 506
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A836CMI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI7_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.490e-44 Identity = 142/401 (35.41%), Postives = 196/401 (48.88%), Query Frame = 1
Query: 2980 GGRSAVYGDVSGLMGAFAGVVWDGACDTQVFALDLKLPSDIAGREKLVMSIPCG-GDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEH---DADVELLQLLMEGDGDAHDHFHRSGGRRLGD-GTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFY-TLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFRVG 4164
GGR G+++ +G F VVWD ACD +VF LD+ L SD G + SIPC + SC W+A V + A+ +H D DVELLQ LM+G+GDAHDHF ++GGRRL + G VVMPSG +++++L Y+ RD T + S++ VA+AN L NSGV + A + Y +E +A + G++ + RD Y DL+QM S CG G + SA+++ G S V C+ ++H HE+GHNMG QH + T W YG G++ C + G +Y ++M+Y C A R+ FS+PD Y G TG DN R L T YTVANFR G
Sbjct: 100 GGRHVWVGELTEQVG-FVSVVWDDACDPRVFQLDVTLASDNDGHRHTITSIPCSEATSVPSCVWMAAVATE--------------MRDEFDVFDRRHLESVMASHTQDHQDLDDDVELLQQLMDGNGDAHDHFVKNGGRRLEEAGQVVMPSGRRLDDGSTVRVLWLYSNRVRDRWTDDT-ITSKIAAGVATANQALANSGVSFRVKAAAIMHVDYDDTTH--MEALA-ALNTGSIAGINTARDKYSADLVQMVIE---SSEYCGYGNLLYSASSSFAPYGFSVVYSDCIV--SYSHIHEIGHNMGCQHNAENSGDATM-WSYGVGYRYCND--GVSKSPYYRSVMSYA-----CTGATRVPYFSSPD--VEYQGRTTGLDTADNVRVLEQTHYTVANFRQG 466
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A835YMZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ0_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.060e-43 Identity = 141/470 (30.00%), Postives = 212/470 (45.11%), Query Frame = 1
Query: 2812 VERGQLTCDFF----KTPTDDAIAFTLFGTDYKFTGFKNGIDTYPPDKPSAGVDEVSSALGGRSAVYGDVSGLMGAFAGVVWDGACDTQVFALDLKLPSDIAG---REKLVMSIPCG-GDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRLGDG-TVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLY----TRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAH---YAGRSWE--CGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFRVGA 4167
++G L+CD F K + +A +L G+ T ++ + A S GR G + G G VVW+ ACD VF LD+ LPS G R + + S+PC G + SCTWLA +T DP P A+ DAA AEH AD+ELL+L+M+GD DA HFHR+GGR L + +MPSG + I +L+ YT A GG Q++SR+ A A++ +L NS + Y + Y ES+ + G L V + +P WRDTY +DL+Q+ + Y G S C F++ + + + +S I H GA H + T WPY +G+++C + +F T+MAYN C + +S+ + G+ G++ DN R + T ++N+R+ A
Sbjct: 28 AQKGTLSCDAFVKATKAAANGMLALSLVGS--VITAKQDHYEALSAAPYYANSTAPQSGFEGRKVWTGQLKGQPGTLT-VVWNDACDADVFHLDIGLPSVSEGSKVRARSIQSVPCPPGSSIDSCTWLAEITHDPLPHPAS--------RMPPSGGKLRHLSEEDAADAAEHAADLELLRLVMDGDSDATHHFHRNGGRHLQEERAAIMPSGRRLDDGSLINVLMVYTQNAETAAGGSAQIVSRIAAAAATSTQVLSNSQLSYRMQFSYAKVTYTESTTAEPFGAALGAVTNNQ----IPSVFGWRDTYKYDLVQLMINAGGYCGHSTRSVCIMIFKLQPSGSLYNHISNSPSRI-----------HRRLGPTGAYHDKVTDKGSTPGWPYAWGYRQCGS---ASTTKFNTIMAYNDW--NCAGQTGIPYYSSS--TLKWNGVTMGSAGEDNIRVFKETSLPISNYRITA 464
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A836C7N3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N3_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.620e-42 Identity = 125/306 (40.85%), Postives = 166/306 (54.25%), Query Frame = 1
Query: 3280 DAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRL-GDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAH---YAGR-----SWECGK----GFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFR 4158
D A A DAD+ELL+L+ EGDGDAHD FHR+GGRRL G+G VVMPSG + +++L AYT +R G T + S + VASAN +L NSG+ + A + ++Y + G G D+ G V +A R+TY DL+Q+ + Y G S C G M S ++ HS V C S ++H HEMGHNMGAQH + + VT DW YG G++ C P F ++M+YN C A R+ FS+P+ Y G TGT+ DN R L+ RYTVANFR
Sbjct: 324 DPEAAAALDADIELLRLMSEGDGDAHDVFHRAGGRRLEGEGAVVMPSGRRLDDGSIVRVLFAYTPASRARWGAAT-LKSMIVGGVASANQVLSNSGLGFKIEAAAIMATTYTEPDG-GFVAALNDLDDGNVTGVNAARETYKADLVQLVINTSDYCGSNCTNCSAVCAAYGRYGNIMTSTSSDFAPWAHSVVYNGCYS--SYSHIHEMGHNMGAQHDAANSQDVT-DWSYGEGYRYCSGETSQPW--FRSVMSYN-----CGAAPRVPYFSSPN--VYYKGRATGTAGADNVRVLKANRYTVANFR 615
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A836C8G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G9_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.340e-40 Identity = 152/415 (36.63%), Postives = 206/415 (49.64%), Query Frame = 1
Query: 2977 LGGRSAVYGDVSGLMGA-FAGVVWDGACDTQVFALDLKLPS----------DIAGREKLVMSIPCG-GDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVA---EHDADVELLQLLMEGDGDAHDHFHRSGGRRLG-DGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNS--GVLYTRVAWMYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHAL---GDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFR 4158
+GGR+ G++ GA FA V WD C+ F +D+ LP+ D A + S+PC G +C W+A V + XXXXXXXXXXXXXX A + E A + ++L+ GD D F RSGGRRL + VVMPSG T ++++ Y + GG +Q+ S + A+ SAN +L NS GV +Y + + VA G VP +A RD Y DLMQM CG G+ + SAT A+ + G+SAV + CL +WAH HE+GHN+GA H + G +DWPY +G++ C P F T+MAY P+ P R+ FS+P TY G TGT+ DNARTLR +R VAN+R
Sbjct: 217 VGGRNVWVGELD--TGAKFATVAWDTDCNPSTFYMDVGLPAQAAAPSSGGADAAEVSSALRSVPCSAGSGVPNCVWVAQVDMALPESIGMPVPQSERYXXXXXXXXXXXXXXXXARNLLLSEEQQALDDDIKLMASTVGD--DDFERSGGRRLERENAVVMPSGRRLDDGTVVRVMYIYGNASGSRWGG-SQIYSMVAAAITSANLVLSNSNAGVQLELATLLYSNYNDTDMYAALNAMVA-----GTVPGANAARDAYSADLMQMLTEDPRY---CGLGWVLNSATNANSKYGNSAVQVLCLGSSNWAHIHEIGHNLGAHHDVSTDGASSATGSDWPYSFGYRYCSTP------NFRTIMAYTCNPNTSP---RIPYFSSP--LITYNGYPTGTATEDNARTLRSSRTAVANYR 607
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A836CH47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH47_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.820e-31 Identity = 119/380 (31.32%), Postives = 176/380 (46.32%), Query Frame = 1
Query: 3037 VVWDGACDTQVFALDLKLPSDIAGREKLVMSIP-CGGDAPASCTWLAMVTRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVA-EHDADVELLQLLMEGDGDAHDHFHRSGGRRLGDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAW--MYVESSYVQVAGEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKC---VNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANF 4155
VVW+ CD ++F + L D G++ ++ SI C G++ TW+ + D D + E D D+ L ++E +GD + H DG V++PSG + I++L AYT RD G T + S + A+ASAN L NSGV + A M+V +Y EG + G +P A R Y DL+Q+ A CG G M S +++ + +S V C + ++H HE+GHNMGA+H +G+ + T WPY G++ C V+PP F ++M+Y+ C A R+ FS+P Y G +TG DNAR LR T+Y VANF
Sbjct: 10 VVWNVECDPEIFHFLVSLGEDEDGKQDVIRSIADCDGES----TWIVSLKAD----------------------ARDEYEPRDVQRILHEPDQDIAALSSIVE-NGDVYHH----------DGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQST-IRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNY---DNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQY---CGFGSLMQSPSSSFREYAYSVVYGGCFA--QFSHIHEIGHNMGARHDVGNTDASAT-WPYAMGYRYCSGEVDPP-----YFRSVMSYS-----CTGAMRVPYFSSP--TVYYQGRQTGMQGADNARVLRETKYIVANF 330
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A835ZFU9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU9_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.350e-30 Identity = 132/453 (29.14%), Postives = 182/453 (40.18%), Query Frame = 1
Query: 2977 LGGRSAVYGDVSGLMGAFAGVVWDGACDTQVFALDLKLPSDIAGREKL-----------VMSIPCGG-DAPASCTWLAMV-TRDPSPTAAAVXXXXXXXXXXXXXXXXXXXXXPDAAAVAEHDADVELLQLLMEGDGDAHDHFHRSGGRRL-GDGTVVMPSGXXXXXXTSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGV---------LYTRVA-------------WMYVESS---------YVQVA----------GEGLEDVAYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTD---WPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTGTSVNDNARTLRMTRYTVANFRV 4161
L G G+V G GA A + WD C+ F +D+K+PS ++ + ++PC G + A+C WLA V T P A V E + D+ELL + GD DA DHF R GGRRL DG V+MPSG + + ++ Y + G +Q+ S + V SAN +L NSGV +Y+ A W V + Y +A + A DM G VP A R+TY DL+Q Q G+SAV C + H HE+GHNMG H +G WPY +G++ C P + T+MAY Y A R +S+P+ Y G TGT+ DN RTL ++ TV+NFR+
Sbjct: 155 LDGVKTWLGEVKGQPGALATIAWDKTCNASKFYMDVKMPSVVSAAATSFDSNIDMVATQLKAVPCSGSNNVANCVWLAEVETALPKAVARQVPASARRHLEERDDQ--------------ELEDDLELLAAMQRGDADARDHFVRYGGRRLESDGAVIMPSGRRLDDGSVVTLMYVYGNYTKARWG--SQVPSMVAAGVNSANLVLTNSGVNFQFQLVNLMYSDYADNNMNTALNRVCIWERVNPAIHSRTTSRLYTAIATCAPCLNLKFARDVPRAAQDMVAGTVPGVAAARNTYGADLIQ--------------------------QYGNSAVLNDCFTPTGLTHAHEIGHNMGCHHDMGTDGSGAASGSLWPYSFGYRYCSTP------SYRTVMAYGCTTGY---AARAPYYSSPN--VYYLGYPTGTTAEDNVRTLNDSKLTVSNFRL 554
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Match: A0A7X8B3A0_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7X8B3A0_9DELT) HSP 1 Score: 102 bits (254), Expect = 2.970e-18 Identity = 86/253 (33.99%), Postives = 126/253 (49.80%), Query Frame = 1
Query: 3439 TSIKMLLAYTALARDVVGGRTQMLSRLTMAVASANSILRNSGVLYTRVAWMYVESSYVQVAGEGLEDV-----AYDMYYGAVPHFDAWRDTYHFDLMQMFAHYAGRSWECGKGFQMLSATAASEQLGHSAVDITCLSGGDWAHTHEMGHNMGAQHALGDPEIVTTDWPYGYGHKKCVNPPGGPVEQFYTLMAYNQGPDYCPPAYRLARFSNPDRAFTYGGMRTG---TSVN--DNARTLRMTRYTVANFRVGA 4167
++I +L+ YT AR GG + + SR+ + VA +N+ NSGV+ +E SY + +G+ + D+ D + VP R+ Y DL+ + + CG + M +S V+ C+S ++ HE+GHNMG HA DP + + Y YG+K P F T+MAY+ P CP R+ FSNP+ TY G TG T+VN +NA +L TR TVAN+RVGA
Sbjct: 182 STIDVLVVYTPAARVSAGGTSAIQSRIQLGVAESNAGYANSGVIQRLRLVGAIEVSYSE-SGDIVTDLNRVTAPSDGFLDTVP---TLRNNYKADLVSLVTATPNTQY-CGVAWLMSGNNPGFAPYAYSVVEEVCISP-NYTFAHELGHNMGLNHARTDP-VGDGAYSYSYGYKD-------PNNAFRTIMAYDC-PGGCP---RILNFSNPN--VTYAGKPTGVSETAVNSANNALSLNNTRVTVANWRVGA 414 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350989 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12471 ID=mRNA_12471|Name=jgi.p|Trimin1|350989|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4170bp|location=Sequence derived from alignment at Contig_77:408544..419781- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGCGCGGCTTCACGGAGCAGGACCAGGAGGCGCTGCACGCGCGCACback to top protein sequence of jgi.p|Trimin1|350989 >Trimin1|350989|estExt_Genemark1.C_Ctg_770035 ID=Trimin1|350989|estExt_Genemark1.C_Ctg_770035|Name=jgi.p|Trimin1|350989|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1390bp MSRGFTEQDQEALHARTLASQTRGRVGLGFSSAAASHAHRDASAPMLFQRback to top mRNA from alignment at Contig_77:408544..419781- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12471 ID=mRNA_12471|Name=jgi.p|Trimin1|350989|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11238bp|location=Sequence derived from alignment at Contig_77:408544..419781- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_77:408544..419781- >mRNA_12471 ID=mRNA_12471|Name=jgi.p|Trimin1|350989|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=4170bp|location=Sequence derived from alignment at Contig_77:408544..419781- (Tribonema minus UTEX_B_3156 )back to top |