Trimin1|352281|estExt_Genemark1.C_Ctg_1140021 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352281
Unique NameTrimin1|352281|estExt_Genemark1.C_Ctg_1140021
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length182
Homology
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BLAST of jgi.p|Trimin1|352281 vs. uniprot
Match: A0A835ZMR1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMR1_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.240e-79
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MGSCAAVAAAPRWRGGRAAASTCCGHDALMALRSHAPSTRQQRRRAAALPLSRCRLHTRVPRQNALRPRNRRACASTPGAAALLSNAISVRRVRDDVILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQQPPFRICVAAGHCFACEHSLAGARRTHGAAAEQ 181
            MGSCAAVAAAPRWRGGRAAASTCCGHDALMALRSHAPSTRQQRRRAAALPLSRCRLHTRVPRQNALRPRNRRACASTPGAAALLSNAISVRRVRDDVILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQQPPFRICVAAGHCFACEHSLAGARRTHGAAAEQ
Sbjct:    1 MGSCAAVAAAPRWRGGRAAASTCCGHDALMALRSHAPSTRQQRRRAAALPLSRCRLHTRVPRQNALRPRNRRACASTPGAAALLSNAISVRRVRDDVILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQQPPFRICVAAGHCFACEHSLAGARRTHGAAAEQ 181
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352281 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZMR1_9STRA2.240e-79100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_114contigContig_114:154039..154775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352281mRNA_15056Tribonema minus UTEX_B_3156 mRNAContig_114 153870..154775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352281|estExt_Genemark1.C_Ctg_1140021 ID=Trimin1|352281|estExt_Genemark1.C_Ctg_1140021|Name=jgi.p|Trimin1|352281|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
MGSCAAVAAAPRWRGGRAAASTCCGHDALMALRSHAPSTRQQRRRAAALP
LSRCRLHTRVPRQNALRPRNRRACASTPGAAALLSNAISVRRVRDDVILA
ARAGGAPAAAAGVAASNFFACASPPSGASEAAAHRRRCTLALRRRSAQQP
PFRICVAAGHCFACEHSLAGARRTHGAAAEQ*
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