Trimin1|170956|e_gw1.77.79.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|170956
Unique NameTrimin1|170956|e_gw1.77.79.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length59
Homology
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: A0A835YLC7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLC7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 7.140e-37
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 RVRAQVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEEVSHR 58
            RVRAQVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEEVSHR
Sbjct:    1 RVRAQVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEEVSHR 58          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: I2CQH5_NANGC (Bromo domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQH5_NANGC)

HSP 1 Score: 63.2 bits (152), Expect = 6.090e-12
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 RVRAQVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTV 52
            RV  +VN H  AG FR PV E DAPGY K++KEP+DL +I++++ DGS  T+
Sbjct:    2 RVWNKVNLHRVAGTFRHPVSEADAPGYFKVIKEPLDLYSIKRQVEDGSIGTL 53          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: D8LKC4_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC4_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.350e-9
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    5 QVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEEVS 56
            +V  H +A IFRK V  KDAPGY +I+KEPMDL  IR+RIM G+  +++++S
Sbjct:  307 RVYRHKFAIIFRKAVNPKDAPGYEEIIKEPMDLSLIRERIMSGALLSLDDMS 358          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: A0A397TZ03_9GLOM (Bromo domain-containing protein (Fragment) n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397TZ03_9GLOM)

HSP 1 Score: 58.5 bits (140), Expect = 1.530e-8
Identity = 22/45 (48.89%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    5 QVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSC 49
            ++  H +A +F+ P+ E+DAPGY  IVK+PMDL T+++R+ DG C
Sbjct:  427 EIGNHKFASVFQNPIKEQDAPGYYSIVKQPMDLKTLKKRLRDGVC 471          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: A0A397J629_9GLOM (Bromo domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J629_9GLOM)

HSP 1 Score: 58.5 bits (140), Expect = 1.540e-8
Identity = 22/50 (44.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    5 QVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEE 54
            +++ H YA +F+ P+ E+DAPGY  IVK+PMDL T+++R+ DG  +  ++
Sbjct:  553 EISNHRYASVFQNPIREQDAPGYYDIVKQPMDLRTLKKRLRDGIVHDTDQ 602          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: A0A397SPP5_9GLOM (Bromo domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SPP5_9GLOM)

HSP 1 Score: 57.8 bits (138), Expect = 2.870e-8
Identity = 21/46 (45.65%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    5 QVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCN 50
            ++N H +A +F+ P+ E+DAPGY +IVK+PMDL T+++R+ +G+ +
Sbjct:  510 EINNHRFASVFQNPIREQDAPGYYEIVKQPMDLRTLKKRLREGTIH 555          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: A0A2W1B266_HELAM (Bromo domain-containing protein (Fragment) n=1 Tax=Helicoverpa armigera TaxID=29058 RepID=A0A2W1B266_HELAM)

HSP 1 Score: 55.8 bits (133), Expect = 3.540e-8
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    9 HHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEE 54
            H YA +F +P+ + +APGYS +VK PMDL TIR+ I +G   T E+
Sbjct:    4 HKYASLFLRPISDDEAPGYSMVVKRPMDLSTIRRNIDNGVIRTTEQ 49          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: UPI001ABDF54C (bromodomain-containing protein 8-like n=2 Tax=Bufo TaxID=8383 RepID=UPI001ABDF54C)

HSP 1 Score: 57.0 bits (136), Expect = 5.300e-8
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 HHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEE 54
            H YAG FRKP+ +K+APGY +IVK P DL TI++ ++ G+  T  E
Sbjct:  308 HRYAGPFRKPLTDKEAPGYKEIVKRPTDLSTIKRGLIKGNIRTSAE 353          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: A0A0D2VKM9_CAPO3 (Brd8 protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VKM9_CAPO3)

HSP 1 Score: 57.0 bits (136), Expect = 5.350e-8
Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    6 VNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEE 54
            ++ H YA +F +PV + + PGYS ++K PMDL TIR+RI DG+  +  +
Sbjct:  374 ISNHRYANVFLRPVTDDEVPGYSSVIKRPMDLTTIRKRIDDGTIRSTRD 422          
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Match: A0A1E1WLI2_PECGO (Bromo domain-containing protein (Fragment) n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WLI2_PECGO)

HSP 1 Score: 56.6 bits (135), Expect = 7.180e-8
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    9 HHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCNTVEE 54
            H YA IF +P+ +++APGYS +VK PMDL TIR+ I  G+  T  E
Sbjct:  279 HKYASIFLRPITDEEAPGYSMVVKRPMDLTTIRRNIDSGAIRTTAE 324          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170956 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLC7_9STRA7.140e-37100.00Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
I2CQH5_NANGC6.090e-1253.85Bromo domain-containing protein (Fragment) n=1 Tax... [more]
D8LKC4_ECTSI2.350e-953.85Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A397TZ03_9GLOM1.530e-848.89Bromo domain-containing protein (Fragment) n=1 Tax... [more]
A0A397J629_9GLOM1.540e-844.00Bromo domain-containing protein n=1 Tax=Diversispo... [more]
A0A397SPP5_9GLOM2.870e-845.65Bromo domain-containing protein n=1 Tax=Glomus cer... [more]
A0A2W1B266_HELAM3.540e-850.00Bromo domain-containing protein (Fragment) n=1 Tax... [more]
UPI001ABDF54C5.300e-852.17bromodomain-containing protein 8-like n=2 Tax=Bufo... [more]
A0A0D2VKM9_CAPO35.350e-844.90Brd8 protein n=1 Tax=Capsaspora owczarzaki (strain... [more]
A0A1E1WLI2_PECGO7.180e-852.17Bromo domain-containing protein (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 12..56
e-value: 1.1E-8
score: 35.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 7..58
score: 11.381001
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..57
e-value: 3.0E-15
score: 57.8
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 5..55
NoneNo IPR availablePANTHERPTHR15398BROMODOMAIN-CONTAINING PROTEIN 8coord: 5..57
NoneNo IPR availablePANTHERPTHR15398:SF4BROMODOMAIN CONTAINING 8coord: 5..57
NoneNo IPR availableCDDcd04369Bromodomaincoord: 9..55
e-value: 2.83916E-15
score: 61.6194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_77contigContig_77:653022..653198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170956mRNA_12498Tribonema minus UTEX_B_3156 mRNAContig_77 653022..653198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|170956|e_gw1.77.79.1 ID=Trimin1|170956|e_gw1.77.79.1|Name=jgi.p|Trimin1|170956|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=59bp
RVRAQVNWHHYAGIFRKPVLEKDAPGYSKIVKEPMDLGTIRQRIMDGSCN
TVEEVSHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf