mRNA_11393 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: A0A835YNN8_9STRA (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN8_9STRA) HSP 1 Score: 375 bits (962), Expect = 8.110e-130 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 Query: 1 DDPRIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDATGSESDGGSALITAGRSASAVGGSFTLSSGPGLGASGAVQLQTAESASTGMLSLSTG 600 DDPRIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDATGSESDGGSALITAGRSASAVGGSFTLSSGPGLGASGAVQLQTAESASTGMLSLSTG Sbjct: 1 DDPRIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDATGSESDGGSALITAGRSASAVGGSFTLSSGPGLGASGAVQLQTAESASTGMLSLSTG 200
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: D7FS23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS23_ECTSI) HSP 1 Score: 164 bits (415), Expect = 1.100e-42 Identity = 95/192 (49.48%), Postives = 127/192 (66.15%), Query Frame = 1 Query: 10 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAA--------GDATGSESDGGSALITAGRSASAVGGSFTLSSGPGL--GASGAVQLQ 555 R++++VP+QV++I+YSSD+RIK + DVDVDD+LQRF VEM Y YTE+WR + + +VRGVIAQQLA +FPEHV+V+ EFELPDK F + +F QVDK LT+DLI A+Q+ YS NS K G + +A D TG+ GS LI+ G ++ GS TL++GPG G SG V +Q Sbjct: 2005 RVVSSVPLQVTTIEYSSDERIKESIIDVDVDDVLQRFMEVEMVEYAYTEEWRQARNLGENARVRGVIAQQLAEVFPEHVEVIPEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSGDKSGDITVATEAGGSYANADPTGAS---GSVLISTGTASLGDSGSITLATGPGAEGGKSGNVSIQ 2193
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: A0A6H5KET3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET3_9PHAE) HSP 1 Score: 162 bits (411), Expect = 3.870e-42 Identity = 96/205 (46.83%), Postives = 135/205 (65.85%), Query Frame = 1 Query: 10 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAA--------GDATGSESDGGSALITAGRSASAVGGSFTLSSGPGL--GASGAVQLQTAESASTGMLSLS 594 R++++VP+QV++I+YSSD+RIK + DVDVDD+LQRF VEM Y YTE+WR + + +VRGVIAQQLA +FPEHV+V+ EFELPDK F + +F QVDK LT+DLI A+Q+ YS N+ K G + +A D TG+ GS LI+ G ++ GS TL++GP G +G+++L+ E +TG +LS Sbjct: 2157 RVVSSVPLQVTTIEYSSDERIKESIVDVDVDDVLQRFMEVEMVEYAYTEEWRQARNLGENARVRGVIAQQLAEVFPEHVEVIPEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNTGDKSGDITVATEAGGSYANADPTGAS---GSVLISTGTASLGDSGSITLATGPSEYGGEAGSIRLRVGEE-NTGSTTLS 2357
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: A0A7S2KFY9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFY9_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.670e-34 Identity = 64/134 (47.76%), Postives = 94/134 (70.15%), Query Frame = 1 Query: 13 IITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHI 414 +I++VP+QV+++QYSSD+RIK + +VD DD+LQR Q ++ Y Y++ WR V I D +VRGVIAQQL +FPEH + +++EL DK F + +F QVDK GL +DLIGA QA R++ A+S I ++ + Sbjct: 39 VISSVPVQVTTVQYSSDKRIKKDIRNVDTDDILQRLQRIQFAEYGYSDAWRRVRGIP-DHRVRGVIAQQLYEVFPEHTKMFEKYELEDKNFSISDFMQVDKQGLVLDLIGAFQASHRRFNIGASSAISSANISV 171
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: A0A2D4CL53_PYTIN (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CL53_PYTIN) HSP 1 Score: 130 bits (326), Expect = 8.400e-31 Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 13 IITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDATGSESDGGSALITAGRSASAVGGSFTLSSG 519 +I+ VP Q+ + SD+RIK +EDVD DD+LQR Q +E+K Y YT++WR + I D VRGVIAQQ FPE+VDV EF +P+ F L +F+QVDK +T+DL+ A+ A R++ AN+P+K +GD T S + GS ++ + SAS GS +++SG Sbjct: 126 LISTVPAQIPQVVAPSDRRIKQNIEDVDEDDVLQRLQKLEIKQYRYTDEWRRIRGIE-DTVVRGVIAQQARAEFPEYVDVKSEFNMPENDFTLKDFHQVDKQKITLDLVAALHAQHRRFNVEANTPLK-------SGDVTVSSAGAGSFMVGSTDSAS---GSVSVTSG 283
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: H3GK17_PHYRM (Peptidase S74 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GK17_PHYRM) HSP 1 Score: 127 bits (318), Expect = 1.050e-29 Identity = 83/200 (41.50%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 10 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGD------ATGSESDGGSALITAGRSASAVGGSFTLSSGPGLGASGAVQLQTAESASTGMLSL 591 ++I++VP Q++ + Y SD+RIK +EDVD DD+LQR Q +E+K Y Y+E WR + I D VRGVIAQQ+ FPE+V + LP+K F L+ F++V+K +TMDLI A+ A R+ NS + G + +A D A+ S S G A+ T S S G F +SSG SGA+ +Q +S + G SL Sbjct: 2979 KMISHVPAQITEVTYPSDRRIKTDIEDVDEDDILQRIQTLEVKKYRYSEMWREIRGIP-DVTVRGVIAQQVGETFPEYVTI-STLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEAQSGRIDVATADGGSYVNASPSGSSGDIAIETGSSSYSKSGDVF-VSSGGAQADSGAINIQAGDSMAGGGGSL 3175
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: G4ZCG7_PHYSP (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCG7_PHYSP) HSP 1 Score: 122 bits (306), Expect = 7.270e-29 Identity = 66/140 (47.14%), Postives = 91/140 (65.00%), Query Frame = 1 Query: 10 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDA 429 ++I++VP Q++ I Y SD+RIK +EDVD DD+LQR Q +E+K Y Y+E WR + I D VRGVIAQQ+ FPE+V V LP+K F L+ F++V+K +TMDLI A+ A R+ NS + G + IA DA Sbjct: 181 KMISHVPAQITEITYPSDRRIKTDIEDVDEDDILQRIQTLEVKKYRYSEMWREIRGIP-DVTVRGVIAQQVEETFPEYVTV-STLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEAQSGRIDIATADA 318
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: D0MTD8_PHYIT (Peptidase S74 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MTD8_PHYIT) HSP 1 Score: 120 bits (302), Expect = 1.270e-28 Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 1 Query: 10 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDA 429 ++I++VP Q++ + Y SD+RIK +ED+D DD+LQR Q +E+K Y Y+E WR + I D VRGVIAQQ+ FPE+V + LP+K F L+ F++V+K +TMDLI A+ A R+ NS + G + IA DA Sbjct: 122 KMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIP-DVTVRGVIAQQVEETFPEYVTI-STLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHRRFKVGPNSEAQSGRIDIATADA 259
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: A0A8K1FDS2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDS2_PYTOL) HSP 1 Score: 123 bits (309), Expect = 1.720e-28 Identity = 73/175 (41.71%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 10 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDA-----TGSESDGGSALITAGRSASAVGGSFTLSSG 519 + IT+VP Q + + Y SD+RIK +EDVD D++LQR Q +E+K Y Y+E WR + I P VRGVIAQQ+ FPE+V V K FELP+K F L+ F++V+K +++DLI A+ A R+ AN+P G++ + DA D G + G S++ G L+SG Sbjct: 1945 KTITHVPAQFTEVIYPSDRRIKTDIEDVDEDEILQRLQTLEIKQYRYSELWREIRGIPDVP-VRGVIAQQVGATFPEYVSVSK-FELPEKNFVLEQFHEVNKQQMSIDLIAAMHAQHRRFKVGANAPTTSGNVDVTTADAGAYVNAAPNGDSGRLRVQTGASSAGSSGDVLLASG 2117
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Match: A0A329SQ29_9STRA (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SQ29_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.260e-28 Identity = 63/140 (45.00%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 10 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDA 429 ++I++VP Q++ + Y SD+RIK +ED+D DD+LQR Q +E+K Y Y+E WR + I D VRGVIAQQ+ FPE+V + LP+K F L+ F++V+K +TMDLI A+ A R+ NS ++ G + IA DA Sbjct: 3167 KMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIP-DVSVRGVIAQQVEETFPEYVTI-STLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEVQSGRIDIATADA 3304 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138092 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11393 ID=mRNA_11393|Name=jgi.p|Trimin1|138092|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=711bp|location=Sequence derived from alignment at Contig_76:659055..660383+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GATGATCCACGCATCATCACCAATGTCCCGATGCAAGTGAGCAGCATCCAback to top protein sequence of jgi.p|Trimin1|138092 >Trimin1|138092|gw1.76.85.1 ID=Trimin1|138092|gw1.76.85.1|Name=jgi.p|Trimin1|138092|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=237bp DDPRIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYback to top mRNA from alignment at Contig_76:659055..660383+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11393 ID=mRNA_11393|Name=jgi.p|Trimin1|138092|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1329bp|location=Sequence derived from alignment at Contig_76:659055..660383+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_76:659055..660383+ >mRNA_11393 ID=mRNA_11393|Name=jgi.p|Trimin1|138092|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=711bp|location=Sequence derived from alignment at Contig_76:659055..660383+ (Tribonema minus UTEX_B_3156 )back to top |