mRNA_7612 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350896
Unique Name	mRNA_7612
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A835YKR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR6_9STRA)

HSP 1 Score: 1011 bits (2614), Expect = 0.000e+0
Identity = 620/620 (100.00%), Postives = 620/620 (100.00%), Query Frame = 1

Query:    1 MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK 1860
            MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK
Sbjct:    1 MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK 620

[Close]

BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A835YM05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM05_9STRA)

HSP 1 Score: 654 bits (1687), Expect = 2.390e-227
Identity = 458/530 (86.42%), Postives = 459/530 (86.60%), Query Frame = 1

Query:  277 ASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRT-DEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK 1860
            ASI  D        P   L QCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGM RLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRA GALMRSVCEA QGVAAAAALRQRRAASDAAAHAKQ   XXXXXXXXXXXXXXX                         ALSLERSLGR  GRPA ASRRALTSAQPADFAADALQPLTP GAALAVGAPGARGELDAELR EAAALRASHARAHE GALLRVRELARERQRAAAARCAA EASAAWARAAREMAESRDAAAALR LTLEQRRADLA HKAARALLREGLRAEAQRRRQ AE         XXXXXXXX    QEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRR  DEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAAL+SVLSK
Sbjct:   58 ASILADAISAQTHMPPPHLWQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMLRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAVGALMRSVCEATQGVAAAAALRQRRAASDAAAHAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSLERSLGRASGRPASASRRALTSAQPADFAADALQPLTPLGAALAVGAPGARGELDAELRVEAAALRASHARAHEVGALLRVRELARERQRAAAARCAATEASAAWARAAREMAESRDAAAALRALTLEQRRADLAAHKAARALLREGLRAEAQRRRQVAEAQDXXXXXXXXXXXXXXX---QEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRLIDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALQSVLSK 584

[Close]

BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A836CGI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGI4_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.070e-64
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 1

Query:    4 QMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVL 333
            QMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWAS FI+VEGGGRG  T V+
Sbjct:   20 QMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASTFIEVEGGGRGRATTVV 129

[Close]

BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A835Z2T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.460e-37
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = -3

Query:    1 VHEPCVQDESRPVQEVVQASVPPWLRSVEPSPA*RPRALVAPVRMKPNSETGIIGAAVAVALAIRARDVIGASRCRRIPCRVHLH 255
            VHEPCVQDESRPVQEVVQAS+PPWLR VEPSPA RPRALVAPVRMKPNSETGIIGAAVAVALAIRARDVIGASRC RIPCRVHLH
Sbjct:  471 VHEPCVQDESRPVQEVVQASIPPWLRGVEPSPAWRPRALVAPVRMKPNSETGIIGAAVAVALAIRARDVIGASRCGRIPCRVHLH 555

[Close]

BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A836CBU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU2_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.610e-18
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 1

Query:  163 RWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRG 315
            RWFNA EPGGDA LDNFL+WARLVL AGL+HPDDAHMWAS FIDVEGGGRG
Sbjct:   66 RWFNALEPGGDASLDNFLDWARLVLGAGLLHPDDAHMWASTFIDVEGGGRG 116

[Close]

BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A835YXP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.870e-14
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 1

Query:  190 GDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRG 315
            GDAGL NFLNWARLVLDAGLVHPDDAHMWAS FIDVEGGGRG
Sbjct:   43 GDAGLGNFLNWARLVLDAGLVHPDDAHMWASTFIDVEGGGRG 84

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350896 vs. uniprot

BLAST of jgi.p|Trimin1|350896 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6


Match Name	E-value	Identity	Description
A0A835YKR6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YM05_9STRA	2.390e-227	86.42	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CGI4_9STRA	2.070e-64	94.55	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2T7_9STRA	3.460e-37	95.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CBU2_9STRA	1.610e-18	88.24	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YXP5_9STRA	1.870e-14	95.24	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_75	contig	Contig_75:182361..188923 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350896\|estExt_Genemark1.C_Ctg_750026
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2E3IK@1\|root,2SAKM@2759\|Eukaryota
Evalue	2.3e-12
Seed ortholog	2880.D7FQN9
Hectar predicted targeting category	other localisation
TranscriptId	351218
Track	FilteredModels1
ProteinId	350896

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350896	gene_7612	Tribonema minus UTEX_B_3156	gene	Contig_75 182361..188923 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350896	Trimin1\|350896\|estExt_Genemark1.C_Ctg_750026	Tribonema minus UTEX_B_3156	polypeptide	Contig_75 182361..188735 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7612_1	exon_7612_1	Tribonema minus UTEX_B_3156	exon	Contig_75 182361..182677 +
exon_7612_2	exon_7612_2	Tribonema minus UTEX_B_3156	exon	Contig_75 182778..182799 +
exon_7612_3	exon_7612_3	Tribonema minus UTEX_B_3156	exon	Contig_75 186718..187913 +
exon_7612_4	exon_7612_4	Tribonema minus UTEX_B_3156	exon	Contig_75 188408..188923 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7612	CDS_7612	Tribonema minus UTEX_B_3156	CDS	Contig_75 182361..182677 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_7612	UTR3_7612	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_75 188736..188923 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_75:182361..188923+
coding sequence from alignment at Contig_75:182361..188923+

spliced messenger RNA

>mRNA_7612 ID=mRNA_7612|Name=jgi.p|Trimin1|350896|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2051bp|location=Sequence derived from alignment at Contig_75:182361..188923+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGATGGACCCGGCAGGGAATGCGTCGACATCGCGAAGCACCAATCA
CGTCACGGGCCCTGATGGCCAGCGCTACCGCAACCGCAGCACCTATGATG
CCGGTTTCAGAGTTCGGCTTCATGCGCACCGGGGCGACCAGTGCACGGGG
ACGTCAGGCAGGCGATGGTTCAACGCTTCGGAGCCAGGGGGGGACGCTGG
CTTGGACAACTTCTTGAACTGGGCGCGACTCGTCTTGGACGCAGGGCTCG
TGCACCCCGACGATGCGCACATGTGGGCCTCCATTTTCATTGATGTGGAA
GGAGGGGGACGGGGCAGCCCGACGGCGGTGCTGATGCAGTGCGACCTGTG
CGCACTCAAGAGGCAGGCCAAGTCAGAGTTCAACATGGCGCTGCAGGTCA
ACGCAACACCCGCCGAACAACAACAAACAGCCCGAGCTCTGCCGCAGCAT
GTAGATGTCGCCTTCTTCCACTCATCGGAGGGCATGTTCCGGCTCGTGCC
GCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCCTGGCGATGGCGACA
GCGACGGCGGAGACGGCGCCACTGCCCCCCCCGCGGCAGCGCTGCTGCTG
TACAACGAGCGGCCGATAGACCTGCGCCACCTGTGCAACGCCTGCGTTCT
GCAGGCGAGCGCCTTCGTCACAGCGCTCGGCCACGACATCCCCATACACC
ACGCCGTGGACGACGAGCGTCGCGCACTGCTGGCGGCGCGGCGCCGCATA
GACCGCCTCAAGGCGCGCTGGCTGCGGCACGAGCGCGAGCAGCGCGCCGG
CGGCGCCCTCATGCGCAGCGTCTGCGAAGCCGCGCAGGGCGTGGCGGCCG
CGGCGGCGCTGCGGCAGCGCCGCGCCGCGTCCGACGCCGCCGCGCACGCC
AAGCAACGCGCTCTGTCCGCCGCAAGGGATGCGCGCCGCCGCGCCGTCGC
CGCCGCAGCGCGCGCGGACCCCGCGCTGACGGCCGTGCTGGCCCGCGACA
GCGCGAGGCGCGTGTGGCAGGGCTCAGCCATGGCGGCACTCTCCCTGGAA
CGTTCCCTAGGCCGCACTGGCGGCAGACCTGCGCCCGCCTCCCGCCGAGC
ACTCACGTCGGCGCAGCCCGCGGACTTCGCCGCCGACGCATTGCAGCCGC
TGACGCCGCAGGGCGCGGCGCTGGCAGTGGGCGCGCCCGGCGCGCGCGGT
GAGCTCGACGCGGAGCTGCGCGCGGAGGCGGCGGCGCTGCGCGCCTCCCA
CGCGCGCGCGCACGAGGCCGGAGCGCTGCTGCGCGTGCGCGAGCTCGCGC
GCGAGCGCCAGCGCGCCGCCGCCGCGCGCTGCGCCGCCGCGGAGGCGAGC
GCGGCGTGGGCCAGGGCTGCGCGCGAGATGGCGGAGAGCCGCGACGCCGC
GGCGGCGCTGCGCGTGCTGACGCTGGAGCAGCGGCGCGCGGACCTGGCGC
GGCACAAGGCGGCGCGCGCGCTGCTGCGGGAGGGGCTGCGCGCGGAGGCG
CAGCGGCGGCGCCAGGCTGCAGAGGTGAGCGCCGTGCGCAGGATGAGCAG
CGGCGCACGGCAGCAGCAGCGGCGGCTGCGCGCCGCGCAAGAGGCAGCGC
ATATGGCAGCAGCGGAGGCGGCGCAGCGCTGCAAGGGCGATGCATACTGG
GGCCTACTGCTTGAAGAACAGCGGTTACGGCGTACCGATGAGGGCCAGCA
GGCCTGGGAAGTGAGAATACGCACCATGCGGGAGAGGGCTGTCGAGGTGG
GGGTCACGGGGGGGGGTGGACTGGCCTGGAAGCCAACCGTTGGGGGAGCG
GACCCCCCTTTGGAGCTCTCAAACAAGCTCATTGCCGCGCTGCGGTCTGT
TCTCAGCAAGTAGAGGACTCAACCTGGCAATACGTGCAGCTTCTAGCAGC
TTTGGCAATGTGACTGTACATAGCAGCGATGTGAATAACATTTAGACACA
ACATGCTTCAACGTGGTTTTGGGGTGTACTCTGAGAGTCGCCAGGACACC
AGGAGCATGGGTCAATGGTGTGCTGCCTGCCAATGTGAAAGTCTGCCAAT
G

protein sequence of jgi.p|Trimin1|350896

>Trimin1|350896|estExt_Genemark1.C_Ctg_750026 ID=Trimin1|350896|estExt_Genemark1.C_Ctg_750026|Name=jgi.p|Trimin1|350896|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=621bp
MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTG
TSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVE
GGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQH
VDVAFFHSSEGMFRLVPPPPPQQQQQQQPGDGDSDGGDGATAPPAAALLL
YNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRI
DRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHA
KQRALSAARDARRRAVAAAARADPALTAVLARDSARRVWQGSAMAALSLE
RSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARG
ELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEAS
AAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEA
QRRRQAAEVSAVRRMSSGARQQQRRLRAAQEAAHMAAAEAAQRCKGDAYW
GLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGA
DPPLELSNKLIAALRSVLSK*

mRNA from alignment at Contig_75:182361..188923+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7612 ID=mRNA_7612|Name=jgi.p|Trimin1|350896|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6563bp|location=Sequence derived from alignment at Contig_75:182361..188923+ (Tribonema minus UTEX_B_3156 )
ATGCAGATGGACCCGGCAGGGAATGCGTCGACATCGCGAAGCACCAATCA
CGTCACGGGCCCTGATGGCCAGCGCTACCGCAACCGCAGCACCTATGATG
CCGGTTTCAGAGTTCGGCTTCATGCGCACCGGGGCGACCAGTGCACGGGG
ACGTCAGGCAGGCGATGGTTCAACGCTTCGGAGCCAGGGGGGGACGCTGG
CTTGGACAACTTCTTGAACTGGGCGCGACTCGTCTTGGACGCAGGGCTCG
TGCACCCCGACGATGCGCACATGTGGGCCTCCATTTTCATTGATGTGGAA
GGAGGGGGACGGGGCAGGTACCTGATTTCTGCTGCAGACAGCACGTGGCG
CACCGTCGTCATTTGGGCGCCTGTGATCCACGGTGGTGACCGTGCGCGGC
GCCTAGCACATGCGCAGCCCGACGGCGGTGCTGATGCAGGTGCGGGTGCG
TGTGCAAGTGAAAGCGGATGTGACGAAGATCACAGCAGCGAGGAACAGCC
GGAACTGCTTGCTATCGCGTCATTTGGTCCGCATCTGGTTCGACATGAGC
CAGCTACCGAGTTCGCCAATCTGTGGGCACAAAAGCTTCCTATGCCGCAC
GCGCACATTGCCATTATCATCGCGGACGTCTGGCGTGAGCAGCAGCTTGT
GTTGTTCCACCGCCGCGCCAACCACTGTGAGCGCCTGAAGTTCCGTGACG
TGGACCCAGTCAGCAACCAGCTCCTACCGCTGCCTGGCCAGGGGCGCCGC
AAGAAGAGTGCAGACAATTCTGCCCCTCCTCTGAACGCATTGGACGGCGA
AAACTACTTTCGCAATGTGTACTCCATACTACTTGGGTGTGATATTTCAC
ACGACACGTTCCAGCGATGGCTCACCAGAGCAGCTACGCCTCCTGCAATC
ACCCTGAACCATTTGAAGTCGTGGGTAAATGCGACAGGTACAGAAATAGT
CGTATGGGAGCACCATGGCCGAGGCTTGCGGCATATTCAAGGTCAGGTCA
ATCGCACACGCTCGCGTCTCACCACCGCTTGCCTGCACCTCGGCGCACGT
GAGGGAAGCGCGTATCGGCTGTTGATTGAGGGCCGCTGGCAAGTCAAGTT
CAGGTGCAGGCACAACTCAGCAGACATGGAGTTTGCCATGGACCATGGTG
TGCCAACTAAGCCATGCCGAGCCATCTTGGCCCCCAGCAACTGGACCAAA
GGCGACAACTCCTGTGCATCCATGGGCTGCAGGCGACAAGCAACGGTGTA
AAGTGTGCCGGTGGTGAGGAGGCGCAGCAGGGGTGGCGAACACGCATTGA
AAGCGATGAGGGGGCGACGGCAGCGGCAGCGGGACCGCCAAGACATCACC
AGCAGCCACAAAAAAACGCCACTGGTCGAATTCGATGTCCGCTCTGTAAA
GCGCCTGAAAGATGGTTGCCAGGGTGACTGTGCTGCAGTGCTGCATCGCT
GCTTCGTAAAGAGTCCTAACGACAAAGCGCCACGCCTGGCGCGTCGGGGC
AGCTGCAGCAGCCGCCATGCAGGCCAGCAAAACAAAAAAGTCTCCCACTG
CAAGATTAGAAGGGGGCGTTTCCTAGTGCAACCAGCAAGAGCACGCTCAC
CTGGTGGTGTTGATTGTCTCCGGTCGTGCTGCCTGGTGGTGCTGCTGCTG
CCTCCTGCTGCTGTCGCCGGCTACTGCTGCTGCTGCTGCTGCTGCTCCCT
ACGAGATCACTAAAAACCTACAACTGCGTCTTGCTTTTGGGTTGTACCTG
CTGTAAGTCCCCAGACCAGCAGTCTCACCACCAGCAATAGGTGTCAAGAC
TCACTGCTGTAGATAACCTCACCAGATGCCCACCCTCAGCAAAAGCAGAC
ACAAAGAGCAGCAGCAGCAGCAGCACAGCAAAACAACTTCACATTTGAAG
TGTGCCTAGGCTTCACCCAACTGCAACCACTGGCATTGCTGGCTGAGCAG
CAGCGAAGGTTGAGTTGGTTGAAGAGTCTCAGACCCCCTGCTGAGGGGGC
TGGACCTTGCGTGATGGATGATGATTCGTTGTGTTTGTTTCTGTTGCACA
GGCTCGGGCATGCAGGGCCGAGGCACCTTTAGGTATGACCATGCTTGGTG
AGACTTGGCAAGTCAGGACTGCATTGCCCGAGGTGGCGCAATCGATTGAC
GCACCATTCGATGGTGTGGCACATGGTCCAATGGCCACACACGGAACCAA
GTGCTCTGACCTGAGGCACAGAAAAAAAATGGCTCAGGCATGCCATGCGT
CCATCGTGCCAGCCTGCCCCCGTCAGCAGACCAAAGCCATGCTTGCAGTC
AGAGCCCATATACCATATACCATGGACCATGCCATTGCCAATTGCCATCA
CAAAAGCCACCTCATTCGAGTTCAACTCTCGAAGTAGTGCTGTGGCAGAG
ACACAAAGAAGGGGTTGGGGTTAGTGTGGAGCGACGTAGTGCTCAAGGAG
TGCCTTAGCAGCACAAGAAGCTTGGCGTCCGGTGTGCGTTGTAAAAGACT
TCTGCAGCACCATGCACCAAATGCAGCGAGACCAGGAGAGGCGATGCTGG
CGCGATGGTCGGGATTACAGCATGTGCTGGCGCAGCAGCAACAGCAGCAA
CATCAGCAGCAGGTCAGGGGCATGGCCATGAGGAAAAGACCGCTGCCGGT
GCGCGACGAGAAGCAGCGGTTGCAGGCGGTGCAGAGGTTTGGGGCGCAAG
CAGGAGTGGCAAGAAGTAAGTGCGACAAAGATATATACCCGTGTAAGTCA
TCTGTGCTATGAATAAGGCACAACCATATGCATGTGAAGTTGGGTGCATC
ATTGCCACATCCAGAACCGTGCTTGCATTGCACCAGCAGTAGGCAGCTGT
TGACCTGGGTCACACTACTTCGTCGCTGCCCCCCCCCCCGCGTTCGCCAC
CTGCGACACACAAGCTGCGCGTCTCAGGCATAGCCACCAAATTCTGCATA
AAGCTGCAGCGGTCGCGGTGACAAACACCAAACCATTACCACAATCATAG
CACTGGAAGTCAACGTTGACGGTTCGCTAACACGAACGTCGCCCATCGAA
ATTCTGCAATGGGCTACATCCCACGTAGCCACACACTGGGGGCATCTCTT
GGCACAGCTGTCACTTTCACCATGTCGCTCAGGGCTTGACTGCGTCATAC
TCTCTCTGCACAATTGCGAAGCTTTCATGATGCAGGAAGGTCTATCGGAG
TGTTGTATGCTGAGCTCTGGTCACTGGTGGAGAGTACTTGTACAGAGACT
TGGATGTCTGCCACATTCTAACATCATGGTGCGTGCTTTTAGAAAGCGTA
CCCGGGGGGGGGGCAGCAAATATGCTCCGATGTTGCATTGCAGTGCCTAT
CCTCCTCACATAGTATACTGCAGGCATTCCATGGCATACATGGCACGAAA
AAGCAGGGTAGTAGCTAAGAAAGCACAGCGATGCTACGGGCTCAGAGCGT
TGTTTCGAGGACCACCTAGGCGGGGTGTGAGATCTCAACTTGATGAATCA
TAGGCGTGCCGTACGAGTGAGTCGTTGGCTGGGCTCGGCTGCTGAGTTTG
GATGCTTTGGAGCATCCTGGCTGGTCCTGCCCCCCCCCCCCGGGGAAAAT
AACTGCCAATTGTTTTTTGGCATGATGTGATGCACGTCCGGCATCGAGCG
TGATGCCTCCGACCATGTCTCAAGGGGTGGTCACTGGCAGCAGTTTCTGA
GTTGCTCCCTTGCGCTACTGGGTGCCGCGCAGTGACCATGTCCCAAGGGG
TGTCACTGGCAGCATGAGATGAAGTCATGGCTGTGCTGACAGAGGTACCT
GCGGCGCGCCTGCTGCAGCACTGCTCTCAGGACGAGCGCACCCACCTGTT
GGTCAGCGTCGCTGCCAGTCCTCAGACAGCGTTTCCTGTCGTAGCAGCAC
GGTTTGCCCCCCGATCCAGCAGACGACCCGTGCTCGACAGCGTTGCTGAT
CAATCAGTGGCTTGCTATGAACGTGTATTGGCCTGCCTCCTGGGGAGGTG
CAGCACTGAGGATTCATGTGCTAGCCTCGAGGCAATGGCGCAGCTGCAGG
GACGAGCCAGATGCCTGCTTGACCTCTACCAGCGCTATGAAACGAGGTCA
GATGCTTCATCCCGTCCTGGAGCGATGGGAACTGCTGCCTGCAGTGACCC
AGCCCACAGGCGCCTGCTGTTTCACGACCTTCTATCTCTGGGCTCATCAC
GCCTGTGCGCAATGACGGAGGTGTTAACGGCATGGCCAGCGGCCTAGCGC
AACCGTGTGCTGGAGTGCTGGGAGATGAGTGGGCCGCCAGTGGCCGCATC
GATTCTTGCAGATGCAATCTCTGCGCAAACGCACATGCCCCGCCGCACCT
GTGGCAGTGCGACCTGTGCGCACTCAAGAGGCAGGCCAAGTCAGAGTTCA
ACATGGCGCTGCAGGTCAACGCAACACCCGCCGAACAACAACAAACAGCC
CGAGCTCTGCCGCAGCATGTAGATGTCGCCTTCTTCCACTCATCGGAGGG
CATGTTCCGGCTCGTGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGC
AGCCTGGCGATGGCGACAGCGACGGCGGAGACGGCGCCACTGCCCCCCCC
GCGGCAGCGCTGCTGCTGTACAACGAGCGGCCGATAGACCTGCGCCACCT
GTGCAACGCCTGCGTTCTGCAGGCGAGCGCCTTCGTCACAGCGCTCGGCC
ACGACATCCCCATACACCACGCCGTGGACGACGAGCGTCGCGCACTGCTG
GCGGCGCGGCGCCGCATAGACCGCCTCAAGGCGCGCTGGCTGCGGCACGA
GCGCGAGCAGCGCGCCGGCGGCGCCCTCATGCGCAGCGTCTGCGAAGCCG
CGCAGGGCGTGGCGGCCGCGGCGGCGCTGCGGCAGCGCCGCGCCGCGTCC
GACGCCGCCGCGCACGCCAAGCAACGCGCTCTGTCCGCCGCAAGGGATGC
GCGCCGCCGCGCCGTCGCCGCCGCAGCGCGCGCGGACCCCGCGCTGACGG
CCGTGCTGGCCCGCGACAGCGCGAGGCGCGTGTGGCAGGGCTCAGCCATG
GCGGCACTCTCCCTGGAACGTTCCCTAGGCCGCACTGGCGGCAGACCTGC
GCCCGCCTCCCGCCGAGCACTCACGTCGGCGCAGCCCGCGGACTTCGCCG
CCGACGCATTGCAGCCGCTGACGCCGCAGGGCGCGGCGCTGGCAGTGGGC
GCGCCCGGCGCGCGCGGTGAGCTCGACGCGGAGCTGCGCGCGGAGGCGGC
GGCGCTGCGCGCCTCCCACGCGCGCGCGCACGAGGCCGGAGCGCTGCTGC
GCGTGCGCGAGCTCGCGCGCGAGCGCCAGCGCGCCGCCGCCGCGCGCTGC
GCCGCCGCGGAGGCGAGCGCGGCGTGGGCCAGGGCTGCGCGCGAGATGGC
GGAGAGCCGCGACGCCGCGGCGGCGCTGCGCGTGCTGACGCTGGAGCAGC
GGCGCGCGGACCTGGCGCGGCACAAGGCGGCGCGCGCGCTGCTGCGGGAG
GGGCTGCGCGCGGAGGCGCAGCGGCGGCGCCAGGCTGCAGAGGTGAGCGC
CGTGTATGGTGGTGGAATGTGTCTGTGCCAAGCTGCAGAGGTGATCGCCG
TGTGTTTTGGATGGTGTTGAAGGTTGGCGTGCCTGTGCCAAGCTGCAGAG
GTGACCGCTGTTTGTGCTCAATGGTGTTGGGGGTTGGCGTGCCTGTGCCT
GAGCTGCTGCTAGAGGGGTGGAAGAGGTGTCACACGGATCAGGATAAAGC
GGGTTTAGCGCGCGTGCTGGCAGCAGCTCTGTCACCAGAGCTTTACTTAG
AGCATCGATGTCATTCATGCTCTCAGTAGTGCTCGCGCCACCGTAAGTGA
GTTGGGACTTTTGGTCATGCATACCGCAACAAGCAAAATAGTGCAGCGTC
ACGTGCAGCCAAATCTGCAGACAAAAAAAAGCCTGTGTCATCGACCGCGT
ATACCGCAACAACGGTACGTGCACTGCGCAACCCGGCAACAAGCGAGCTG
CTGATGCCACACGCGCTCCTCTGTGTTCTTGTGACTCAACACCGCAGGCG
CAGGATGAGCAGCGGCGCACGGCAGCAGCAGCGGCGGCTGCGCGCCGCGC
AAGAGGCAGCGCATATGGCAGCAGCGGAGGCGGCGCAGCGCTGCAAGGGC
GATGCATACTGGGGCCTACTGCTTGAAGAACAGCGGTTACGGCGTACCGA
TGAGGGCCAGCAGGCCTGGGAAGTGAGAATACGCACCATGCGGGAGAGGG
CTGTCGAGGTGGGGGTCACGGGGGGGGGTGGACTGGCCTGGAAGCCAACC
GTTGGGGGAGCGGACCCCCCTTTGGAGCTCTCAAACAAGCTCATTGCCGC
GCTGCGGTCTGTTCTCAGCAAGTAGAGGACTCAACCTGGCAATACGTGCA
GCTTCTAGCAGCTTTGGCAATGTGACTGTACATAGCAGCGATGTGAATAA
CATTTAGACACAACATGCTTCAACGTGGTTTTGGGGTGTACTCTGAGAGT
CGCCAGGACACCAGGAGCATGGGTCAATGGTGTGCTGCCTGCCAATGTGA
AAGTCTGCCAATG

Coding sequence (CDS) from alignment at Contig_75:182361..188923+

>mRNA_7612 ID=mRNA_7612|Name=jgi.p|Trimin1|350896|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1863bp|location=Sequence derived from alignment at Contig_75:182361..188923+ (Tribonema minus UTEX_B_3156 )
ATGCAGATGGACCCGGCAGGGAATGCGTCGACATCGCGAAGCACCAATCA
CGTCACGGGCCCTGATGGCCAGCGCTACCGCAACCGCAGCACCTATGATG
CCGGTTTCAGAGTTCGGCTTCATGCGCACCGGGGCGACCAGTGCACGGGG
ACGTCAGGCAGGCGATGGTTCAACGCTTCGGAGCCAGGGGGGGACGCTGG
CTTGGACAACTTCTTGAACTGGGCGCGACTCGTCTTGGACGCAGGGCTCG
TGCACCCCGACGATGCGCACATGTGGGCCTCCATTTTCATTGATGTGGAA
GGAGGGGGACGGGGCAGCCCGACGGCGGTGCTGATGCAGTGCGACCTGTG
CGCACTCAAGAGGCAGGCCAAGTCAGAGTTCAACATGGCGCTGCAGGTCA
ACGCAACACCCGCCGAACAACAACAAACAGCCCGAGCTCTGCCGCAGCAT
GTAGATGTCGCCTTCTTCCACTCATCGGAGGGCATGTTCCGGCTCGTGCC
GCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCCTGGCGATGGCGACA
GCGACGGCGGAGACGGCGCCACTGCCCCCCCCGCGGCAGCGCTGCTGCTG
TACAACGAGCGGCCGATAGACCTGCGCCACCTGTGCAACGCCTGCGTTCT
GCAGGCGAGCGCCTTCGTCACAGCGCTCGGCCACGACATCCCCATACACC
ACGCCGTGGACGACGAGCGTCGCGCACTGCTGGCGGCGCGGCGCCGCATA
GACCGCCTCAAGGCGCGCTGGCTGCGGCACGAGCGCGAGCAGCGCGCCGG
CGGCGCCCTCATGCGCAGCGTCTGCGAAGCCGCGCAGGGCGTGGCGGCCG
CGGCGGCGCTGCGGCAGCGCCGCGCCGCGTCCGACGCCGCCGCGCACGCC
AAGCAACGCGCTCTGTCCGCCGCAAGGGATGCGCGCCGCCGCGCCGTCGC
CGCCGCAGCGCGCGCGGACCCCGCGCTGACGGCCGTGCTGGCCCGCGACA
GCGCGAGGCGCGTGTGGCAGGGCTCAGCCATGGCGGCACTCTCCCTGGAA
CGTTCCCTAGGCCGCACTGGCGGCAGACCTGCGCCCGCCTCCCGCCGAGC
ACTCACGTCGGCGCAGCCCGCGGACTTCGCCGCCGACGCATTGCAGCCGC
TGACGCCGCAGGGCGCGGCGCTGGCAGTGGGCGCGCCCGGCGCGCGCGGT
GAGCTCGACGCGGAGCTGCGCGCGGAGGCGGCGGCGCTGCGCGCCTCCCA
CGCGCGCGCGCACGAGGCCGGAGCGCTGCTGCGCGTGCGCGAGCTCGCGC
GCGAGCGCCAGCGCGCCGCCGCCGCGCGCTGCGCCGCCGCGGAGGCGAGC
GCGGCGTGGGCCAGGGCTGCGCGCGAGATGGCGGAGAGCCGCGACGCCGC
GGCGGCGCTGCGCGTGCTGACGCTGGAGCAGCGGCGCGCGGACCTGGCGC
GGCACAAGGCGGCGCGCGCGCTGCTGCGGGAGGGGCTGCGCGCGGAGGCG
CAGCGGCGGCGCCAGGCTGCAGAGGTGAGCGCCGTGCGCAGGATGAGCAG
CGGCGCACGGCAGCAGCAGCGGCGGCTGCGCGCCGCGCAAGAGGCAGCGC
ATATGGCAGCAGCGGAGGCGGCGCAGCGCTGCAAGGGCGATGCATACTGG
GGCCTACTGCTTGAAGAACAGCGGTTACGGCGTACCGATGAGGGCCAGCA
GGCCTGGGAAGTGAGAATACGCACCATGCGGGAGAGGGCTGTCGAGGTGG
GGGTCACGGGGGGGGGTGGACTGGCCTGGAAGCCAACCGTTGGGGGAGCG
GACCCCCCTTTGGAGCTCTCAAACAAGCTCATTGCCGCGCTGCGGTCTGT
TCTCAGCAAGTAG