Trimin1|350896|estExt_Genemark1.C_Ctg_750026 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350896
Unique NameTrimin1|350896|estExt_Genemark1.C_Ctg_750026
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length621
Homology
BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A835YKR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR6_9STRA)

HSP 1 Score: 1011 bits (2614), Expect = 0.000e+0
Identity = 620/620 (100.00%), Postives = 620/620 (100.00%), Query Frame = 0
Query:    1 MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK 620
            MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK
Sbjct:    1 MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK 620          
BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A835YM05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM05_9STRA)

HSP 1 Score: 654 bits (1687), Expect = 2.560e-228
Identity = 458/530 (86.42%), Postives = 459/530 (86.60%), Query Frame = 0
Query:   93 ASIFIDVEGGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMFRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHAKQRALXXXXXXXXXXXXXXXRADPALTAVLARDSARRVWQGSAMAALSLERSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARGELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEASAAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEAQRRRQAAEVSAVRRMSSXXXXXXXXLRAAQEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRT-DEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALRSVLSK 620
            ASI  D        P   L QCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGM RLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRA GALMRSVCEA QGVAAAAALRQRRAASDAAAHAKQ   XXXXXXXXXXXXXXX                         ALSLERSLGR  GRPA ASRRALTSAQPADFAADALQPLTP GAALAVGAPGARGELDAELR EAAALRASHARAHE GALLRVRELARERQRAAAARCAA EASAAWARAAREMAESRDAAAALR LTLEQRRADLA HKAARALLREGLRAEAQRRRQ AE         XXXXXXXX    QEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRR  DEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAAL+SVLSK
Sbjct:   58 ASILADAISAQTHMPPPHLWQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQHVDVAFFHSSEGMLRLVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRIDRLKARWLRHEREQRAVGALMRSVCEATQGVAAAAALRQRRAASDAAAHAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSLERSLGRASGRPASASRRALTSAQPADFAADALQPLTPLGAALAVGAPGARGELDAELRVEAAALRASHARAHEVGALLRVRELARERQRAAAARCAATEASAAWARAAREMAESRDAAAALRALTLEQRRADLAAHKAARALLREGLRAEAQRRRQVAEAQDXXXXXXXXXXXXXXX---QEAAHMAAAEAAQRCKGDAYWGLLLEEQRLRRLIDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGADPPLELSNKLIAALQSVLSK 584          
BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A836CGI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGI4_9STRA)

HSP 1 Score: 218 bits (556), Expect = 6.450e-65
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0
Query:    2 QMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRGSPTAVL 111
            QMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWAS FI+VEGGGRG  T V+
Sbjct:   20 QMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTGTSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASTFIEVEGGGRGRATTVV 129          
BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A836CBU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU2_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.200e-18
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0
Query:   55 RWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRG 105
            RWFNA EPGGDA LDNFL+WARLVL AGL+HPDDAHMWAS FIDVEGGGRG
Sbjct:   66 RWFNALEPGGDASLDNFLDWARLVLGAGLLHPDDAHMWASTFIDVEGGGRG 116          
BLAST of jgi.p|Trimin1|350896 vs. uniprot
Match: A0A835YXP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.490e-14
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 0
Query:   64 GDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVEGGGRG 105
            GDAGL NFLNWARLVLDAGLVHPDDAHMWAS FIDVEGGGRG
Sbjct:   43 GDAGLGNFLNWARLVLDAGLVHPDDAHMWASTFIDVEGGGRG 84          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350896 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YKR6_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YM05_9STRA2.560e-22886.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGI4_9STRA6.450e-6594.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBU2_9STRA1.200e-1888.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXP5_9STRA1.490e-1495.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 519..539
NoneNo IPR availableCOILSCoilCoilcoord: 236..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_75contigContig_75:182361..188735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350896mRNA_7612Tribonema minus UTEX_B_3156 mRNAContig_75 182361..188923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350896|estExt_Genemark1.C_Ctg_750026 ID=Trimin1|350896|estExt_Genemark1.C_Ctg_750026|Name=jgi.p|Trimin1|350896|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=621bp
MQMDPAGNASTSRSTNHVTGPDGQRYRNRSTYDAGFRVRLHAHRGDQCTG
TSGRRWFNASEPGGDAGLDNFLNWARLVLDAGLVHPDDAHMWASIFIDVE
GGGRGSPTAVLMQCDLCALKRQAKSEFNMALQVNATPAEQQQTARALPQH
VDVAFFHSSEGMFRLVPPPPPQQQQQQQPGDGDSDGGDGATAPPAAALLL
YNERPIDLRHLCNACVLQASAFVTALGHDIPIHHAVDDERRALLAARRRI
DRLKARWLRHEREQRAGGALMRSVCEAAQGVAAAAALRQRRAASDAAAHA
KQRALSAARDARRRAVAAAARADPALTAVLARDSARRVWQGSAMAALSLE
RSLGRTGGRPAPASRRALTSAQPADFAADALQPLTPQGAALAVGAPGARG
ELDAELRAEAAALRASHARAHEAGALLRVRELARERQRAAAARCAAAEAS
AAWARAAREMAESRDAAAALRVLTLEQRRADLARHKAARALLREGLRAEA
QRRRQAAEVSAVRRMSSGARQQQRRLRAAQEAAHMAAAEAAQRCKGDAYW
GLLLEEQRLRRTDEGQQAWEVRIRTMRERAVEVGVTGGGGLAWKPTVGGA
DPPLELSNKLIAALRSVLSK*
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