Trimin1|350846|estExt_Genemark1.C_Ctg_740021 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350846
Unique NameTrimin1|350846|estExt_Genemark1.C_Ctg_740021
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length126
Homology
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BLAST of jgi.p|Trimin1|350846 vs. uniprot
Match: A0A835YK81_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK81_9STRA)

HSP 1 Score: 220 bits (560), Expect = 3.620e-72
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MTKCTIWADCSCSTAEGCXXXXXXXXXTVSIKALEDAKASACKFGDCPCGDSXXXXXXXXXGGTVERTEEQWIALAKKSKAKAILFDCSGPGYSTGECPWSDCSCKASGGECACKESCGCGSTKA 125
            MTKCTIWADCSCSTAEGCXXXXXXXXXTVSIKALEDAKASACKFGDCPCGDSXXXXXXXXXGGTVERTEEQWIALAKKSKAKAILFDCSGPGYSTGECPWSDCSCKASGGECACKESCGCGSTKA
Sbjct:    1 MTKCTIWADCSCSTAEGCXXXXXXXXXTVSIKALEDAKASACKFGDCPCGDSXXXXXXXXXGGTVERTEEQWIALAKKSKAKAILFDCSGPGYSTGECPWSDCSCKASGGECACKESCGCGSTKA 125
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BLAST of jgi.p|Trimin1|350846 vs. uniprot
Match: A0A7S0W5N0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W5N0_9CRYP)

HSP 1 Score: 51.2 bits (121), Expect = 9.960e-6
Identity = 37/122 (30.33%), Postives = 56/122 (45.90%), Query Frame = 0 
Query:    3 KCTIWADCSCST-AEGCXXXXXXXXXTVSIKALEDAKASACKFGDCPCGDSXXXXXXXXXGGTVERTEEQWIALAKKSKAKAILFDCSGPGYSTGECPWSDCSCKASG-GECACKESCGCGS 122
             C+ WADC C+   + C         T++ +A+ + K +AC + DC CG +  XX      G   +T+++W A AK + A          G   GE        KA+  G+C C  +C CGS
Sbjct:    2 SCSKWADCKCALHGDTCDCGEGCKCGTITHEAMAEFKKTACPWSDCKCGVACGXXSTCNCVGKTPKTDKEWAAAAKGAAA----------GPPAGEXXXXXXXXKAANQGKCGCGAACKCGS 113
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350846 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YK81_9STRA3.620e-72100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0W5N0_9CRYP9.960e-630.33Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:217678..219317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350846mRNA_10527Tribonema minus UTEX_B_3156 mRNAContig_74 217373..219352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350846|estExt_Genemark1.C_Ctg_740021 ID=Trimin1|350846|estExt_Genemark1.C_Ctg_740021|Name=jgi.p|Trimin1|350846|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=126bp
MTKCTIWADCSCSTAEGCKCGESCSCGTVSIKALEDAKASACKFGDCPCG
DSCGCGSGCGCGGTVERTEEQWIALAKKSKAKAILFDCSGPGYSTGECPW
SDCSCKASGGECACKESCGCGSTKA*
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